@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1032: (2016-03-20 )
MSELKLKSFEIRKDVLKMIYDAKTGHTGSDLSCADILVALCYGVLNVNPENPEALDRDRYVQSKGHAVEVLWAVLADKGFFAKEELADFSAFGSRIIGHPNNKVAGIEMNTGSLGHGLSVSVGMALAAKMDGKSYHTYTLMGDGELAEGSVWEGAMAAANYKLDNLTAIIDRNSLQISGRTEDVMSVEPLADKWRAFGWDVIEADGNNPDKLQAIFKTVNETGKPRLIIAKTIKGYGVKMAENVAKWHHYVPSSEEYEIAMKDLEERMEACRHE

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DX5_A_17(4KXW)
TKT_HUMAN
[Raw transfer]



S6P_A_15(4KXU)
TKT_HUMAN
[Raw transfer]



1Y7_A_2(4KXX)
TKT_HUMAN
[Raw transfer]



DX5_A_13(4KXV)
TKT_HUMAN
[Raw transfer]



TPP_A_2(3MOS)
TKT_HUMAN
[Raw transfer]



TDP_A_3(4KXX)
TKT_HUMAN
[Raw transfer]



TDP_A_16(4KXU)
TKT_HUMAN
[Raw transfer]



TDP_A_16(4KXW)
TKT_HUMAN
[Raw transfer]



TDP_A_12(4KXV)
TKT_HUMAN
[Raw transfer]



TDP_B_8(3OOY)
TKT_HUMAN
[Raw transfer]



TDP_A_3(3OOY)
TKT_HUMAN
[Raw transfer]



R5P_A_6(3M6L)
?
[Raw transfer]



RP5_A_5(3M7I)
?
[Raw transfer]



EDO_A_2(4KXU)
TKT_HUMAN
[Raw transfer]
103 HHSearch 90.5634% -62 - C3 -3L84 - ? -
1 PsiBlast_PDB 90.0838% -63 - C3 -4KXU 5.5 TKT_HUMAN
3 PsiBlast_PDB 89.7138% -62 - C3 -4KXW 5.1 TKT_HUMAN
2 PsiBlast_PDB 89.5938% -63 - C3 -4KXV 4.7 TKT_HUMAN
4 PsiBlast_PDB 89.4038% -61 - C3 -4KXX 5.1 TKT_HUMAN
21 PsiBlast_CBE 89.2038% -60 - C3 -4KXY - TKT_HUMAN -
22 PsiBlast_CBE 89.0938% -60 - C3 -3OOY 5.8 TKT_HUMAN
7 PsiBlast_PDB 89.0838% -62 - C3 -3OOY 4.5 TKT_HUMAN
6 PsiBlast_PDB 88.9338% -59 - C3 -3MOS 4.6 TKT_HUMAN
5 PsiBlast_PDB 88.6938% -61 - C3 -4KXY - TKT_HUMAN -
105 HHSearch 88.4134% -60 - C3 -1ITZ - TKTC_MAIZE -
110 HHSearch 87.4334% -64 - C3 -1GPU - TKT1_YEAST -
35 PsiBlast_CBE 86.2135% -65 - C3 -2R5N - TKT1_ECOLI -
34 PsiBlast_CBE 86.1735% -66 - C3 -2R8O - TKT1_ECOLI -
32 PsiBlast_CBE 85.7135% -67 - C3 -2R8P - TKT1_ECOLI -
37 PsiBlast_CBE 85.6532% -62 - C3 -1ITZ - TKTC_MAIZE -
20 PsiBlast_PDB 85.5435% -65 - C3 -2R5N - TKT1_ECOLI -
33 PsiBlast_CBE 85.3035% -66 - C3 -2R8O - TKT1_ECOLI -
31 PsiBlast_CBE 85.1735% -67 - C3 -2R8P - TKT1_ECOLI -
106 HHSearch 85.1230% -65 - C3 -1R9J - ? -
16 PsiBlast_PDB 84.1535% -63 - C3 -3M7I 2.9 ?
18 PsiBlast_PDB 83.6335% -62 - C3 -3M6L 2.0 ?