@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1441: (2016-03-24 )
LNERIFRENTRPVQVGNLTIGGSEELTIQSMTTTKTHDVEATVAEIHRLEEAGCQIVRVACPDERAANALSAIKKKIHIPLVADIHFDYRLALKAIDAGVDKIRINPGNIGRRDRVEKVVNAAKAKNIPIRIGVNAGSLEKKIIQKYGYPTADGMVESALAHIKILEDLDFYDIIVSLKASDVNLAIEAYDKASRAFNYPLHLGITESGTQFAGGIKSAAGLGAILSLGIGNTLRVSLSADPVEEIKVAREVLKSFGLSSNAAMLISCPTCGRIEIDLIRIANEVENYIAKIEVPIKVAVLGCAVNGPGEAREADIGIAGSNGEGLLFRHGKIIRKVPEAIMIDELKKEIDILAEEFFVKKIDLESLR

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SF4_A_2(4S39)
ISPG_THET8
[Raw transfer]



H6P_B_8(4S23)
ISPG_THETH
[Raw transfer]



SF4_A_2(4S3E)
ISPG_THET8
[Raw transfer]



SF4_A_3(4S3C)
ISPG_THET8
[Raw transfer]



H6P_A_5(4S23)
ISPG_THETH
[Raw transfer]



SF4_A_3(4S38)
ISPG_THET8
[Raw transfer]



SF4_A_3(4S3B)
ISPG_THET8
[Raw transfer]



SF4_B_6(4S23)
ISPG_THETH
[Raw transfer]



SF4_A_3(4S23)
ISPG_THETH
[Raw transfer]



SF4_A_3(4S3A)
ISPG_THET8
[Raw transfer]



CDI_A_2(4S38)
ISPG_THET8
[Raw transfer]



F3S_A_2(4S3D)
ISPG_THET8
[Raw transfer]



0CG_A_3(4S3E)
ISPG_THET8
[Raw transfer]
24 PsiBlast_CBE 92.7749%-100 * C5 *3NOY - ISPG_AQUAE -
23 PsiBlast_CBE 91.8249%-100 - C5 -3NOY - ISPG_AQUAE -
22 PsiBlast_CBE 91.5782% -98 - C5 -4MWA - ISPG_BACAN -
25 PsiBlast_CBE 91.5049%-101 - C5 -3NOY - ISPG_AQUAE -
52 Fugue 91.3949% -98 - C5 -3NOY - ISPG_AQUAE -
30 HHSearch 91.0849% -98 - C5 -3NOY - ISPG_AQUAE -
2 PsiBlast_PDB 90.7949% -97 - C5 -3NOY - ISPG_AQUAE -
21 PsiBlast_CBE 90.5382% -94 - C5 -4MWA - ISPG_BACAN -
1 PsiBlast_PDB 88.1581% -93 - C5 -4MWA - ISPG_BACAN -
4 PsiBlast_PDB 83.7736% -91 - C5 -4S23 2.5 ISPG_THETH
29 PsiBlast_CBE 83.4736% -98 - C5 -2Y0F - ISPG_THET2 -
3 PsiBlast_PDB 83.3836% -94 - C5 -2Y0F - ISPG_THET2 -
9 PsiBlast_PDB 83.2436% -97 - C5 -4S3E 3.6 ISPG_THET8
11 PsiBlast_PDB 83.0636% -96 - C5 -4S3A 3.4 ISPG_THET8
26 PsiBlast_CBE 83.0536% -86 - C5 -4S23 2.5 ISPG_THETH
6 PsiBlast_PDB 82.9636% -98 - C5 -4S39 3.6 ISPG_THET8
5 PsiBlast_PDB 82.9436% -99 - C5 -4S38 3.4 ISPG_THET8
8 PsiBlast_PDB 82.7236% -98 - C5 -4S3D 3.7 ISPG_THET8
12 PsiBlast_PDB 82.7036% -97 - C5 -4S3C 3.6 ISPG_THET8
10 PsiBlast_PDB 82.6436% -98 - C5 -4S3F - ISPG_THET8 -
7 PsiBlast_PDB 82.6136% -98 - C5 -4S3B 3.7 ISPG_THET8