@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1183: (2015-12-06 )
MPNQEKMEKAIYQFLEALGENPDREGLKDTPKRVAKMYIEMFSGLNQDPKEQFTAVFSENHEEVVIVKDIPFYSMCEHHLVPFYGKAHIAYLPNDGRVTGLSKLARAFEVASKRPQLQERLTAQVAQALEDALAPKGIFVMIEAEHMCMTMRGIKKPGSKTITTVARGLYKDDRYERQEILSLIQKG

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

8DG_D_13(1WUR)
?
[Raw transfer]



8DG_A_11(1WUR)
?
[Raw transfer]



8DG_C_12(1WUR)
?
[Raw transfer]



8DG_A_11(1WUR)
?
[Raw transfer]



8DG_A_15(1WUR)
?
[Raw transfer]



8GT_C_12(1WUQ)
?
[Raw transfer]



8GT_C_13(1WUQ)
?
[Raw transfer]



8GT_A_11(1WUQ)
?
[Raw transfer]



8GT_D_14(1WUQ)
?
[Raw transfer]



8GT_A_15(1WUQ)
?
[Raw transfer]



8DG_D_14(1WUR)
?
[Raw transfer]



GTP_B_11(4DU6)
?
[Raw transfer]



GTP_A_6(4DU6)
?
[Raw transfer]



GTP_E_24(4DU6)
?
[Raw transfer]



GTP_C_14(4DU6)
?
[Raw transfer]



GTP_D_20(4DU6)
?
[Raw transfer]



IPA_B_12(1FB1)
GCH1_HUMAN
[Raw transfer]



IPA_B_11(1FB1)
GCH1_HUMAN
[Raw transfer]



IPA_B_11(1FB1)
GCH1_HUMAN
[Raw transfer]



IPA_D_13(1FB1)
GCH1_HUMAN
[Raw transfer]



IPA_D_14(1FB1)
GCH1_HUMAN
[Raw transfer]



IPA_A_15(1FB1)
GCH1_HUMAN
[Raw transfer]
1 PsiBlast_PDB 98.1759% -95 - C9 -4UQF - ? -
172 HHSearch 91.0449% -94 - C9 -1IS8 - GCH1_RAT -
174 HHSearch 89.2942% -94 - C9 -1WUR 5.3 ?
5 PsiBlast_PDB 89.2849% -95 - C9 -1WPL - GCH1_RAT -
163 Fugue 88.8248% -94 - C9 -1FB1 3.8 GCH1_HUMAN
30 PsiBlast_CBE 88.7649% -95 - C9 -1IS8 - GCH1_RAT -
4 PsiBlast_PDB 88.3549% -94 - C9 -1IS8 - GCH1_RAT -
20 PsiBlast_CBE 88.3450% -92 - C9 -1FB1 3.5 GCH1_HUMAN
49 PsiBlast_CBE 88.3343% -97 - C9 -1WUR 5.3 ?
8 PsiBlast_PDB 88.2043% -99 - C9 -1WUR 5.3 ?
7 PsiBlast_PDB 88.2043%-102 - C9 -1WUQ 5.1 ?
6 PsiBlast_PDB 88.0843%-100 - C9 -1WM9 - ? -
53 PsiBlast_CBE 88.0743% -98 - C9 -1WUQ 4.8 ?
54 PsiBlast_CBE 87.9643% -99 - C9 -1WUQ 5.1 ?
51 PsiBlast_CBE 87.9343% -99 - C9 -1WUR 5.2 ?
57 PsiBlast_CBE 87.8643% -99 - C9 -1WM9 - ? -
58 PsiBlast_CBE 87.5743%-103 - C9 -1WM9 - ? -
50 PsiBlast_CBE 87.4943% -97 - C9 -1WUR 5.4 ?
9 PsiBlast_PDB 87.3539%-102 - C9 -4DU6 4.7 ?
48 PsiBlast_CBE 87.1943%-100 - C9 -1WUR 5.1 ?
55 PsiBlast_CBE 87.1843%-100 - C9 -1WUQ 5.0 ?
2 PsiBlast_PDB 87.1750% -90 - C9 -1FB1 3.8 GCH1_HUMAN
52 PsiBlast_CBE 87.1643%-100 - C9 -1WUQ 4.8 ?
63 PsiBlast_CBE 87.1539%-102 - C9 -4DU6 4.3 ?
61 PsiBlast_CBE 87.0739% -98 - C9 -4DU6 4.1 ?
18 PsiBlast_CBE 86.9750% -93 - C9 -1FB1 3.4 GCH1_HUMAN
17 PsiBlast_CBE 86.4650% -95 - C9 -1FB1 3.5 GCH1_HUMAN
62 PsiBlast_CBE 86.3439%-100 - C9 -4DU6 4.0 ?
19 PsiBlast_CBE 86.3050% -94 - C9 -1FB1 3.6 GCH1_HUMAN
60 PsiBlast_CBE 86.2439% -99 - C9 -4DU6 4.4 ?