@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1635: (2015-12-09 )
MGKFQVISHPLIQHKLSILRRTTTSTKDFRELVDEIAMLMGYEVSRDLPLEDVEIQTPVATTVQKQLAGKKLAIVPILRAGIGMVDGFLSLVPAAKVGHIGMYRDEETFQPVEYLVKLPEDIDQRQIFVVDPMLATGGSAILAVDSLKKRGAASIKFVCLVAAPEGVAALQEAHPDVDIYTAALDEKLNEHGYIVPGLGDAGDRLFGTK

Atome Classification :

(46 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

U5P_C_3(1I5E)
UPP_BACCL
[Raw transfer]




U5P_D_4(1I5E)
UPP_BACCL
[Raw transfer]




U5P_C_3(1I5E)
UPP_BACCL
[Raw transfer]




U5P_H_8(1XTT)
UPP_SULSO
[Raw transfer]




U5P_G_7(1XTT)
UPP_SULSO
[Raw transfer]




U5P_D_9(1UPU)
UPP_TOXGO
[Raw transfer]




U5P_E_5(1XTT)
UPP_SULSO
[Raw transfer]




U5P_B_11(1UPU)
UPP_TOXGO
[Raw transfer]




U5P_E_5(1XTT)
UPP_SULSO
[Raw transfer]




U5P_Q_17(1O5O)
UPP_THEMA
[Raw transfer]




U5P_F_6(1XTT)
UPP_SULSO
[Raw transfer]




U5P_O_15(1O5O)
UPP_THEMA
[Raw transfer]




U5P_A_12(1UPU)
UPP_TOXGO
[Raw transfer]




U5P_P_16(1O5O)
UPP_THEMA
[Raw transfer]




U5P_N_14(1O5O)
UPP_THEMA
[Raw transfer]




PRP_A_4(1VST)
UPP_SULSO
[Raw transfer]




U5P_N_14(1O5O)
UPP_THEMA
[Raw transfer]




U5P_C_10(1UPU)
UPP_TOXGO
[Raw transfer]




PRP_A_7(3G6W)
UPP_SULSO
[Raw transfer]




PRP_B_16(1JLS)
UPP_TOXGO
[Raw transfer]




URA_A_16(1BD4)
UPP_TOXGO
[Raw transfer]




URA_D_18(1JLS)
UPP_TOXGO
[Raw transfer]




URA_B_15(1BD4)
UPP_TOXGO
[Raw transfer]




URF_B_19(1UPF)
UPP_TOXGO
[Raw transfer]




URA_C_14(1BD4)
UPP_TOXGO
[Raw transfer]




URA_A_17(1JLS)
UPP_TOXGO
[Raw transfer]




HSX_C_13(3G6W)
UPP_SULSO
[Raw transfer]




URA_D_13(1BD4)
UPP_TOXGO
[Raw transfer]




URF_A_20(1UPF)
UPP_TOXGO
[Raw transfer]




URA_C_19(1JLS)
UPP_TOXGO
[Raw transfer]




URF_D_17(1UPF)
UPP_TOXGO
[Raw transfer]




URF_C_18(1UPF)
UPP_TOXGO
[Raw transfer]




HSX_D_18(3G6W)
UPP_SULSO
[Raw transfer]




POP_B_12(3G6W)
UPP_SULSO
[Raw transfer]




ACY_J_10(1XTT)
UPP_SULSO
[Raw transfer]




ACY_I_9(1XTT)
UPP_SULSO
[Raw transfer]




98 HHSearch 95.0771%-136 - C2 -1I5E 5.6 UPP_BACCL
1 PsiBlast_PDB 94.4870%-136 - C2 -1I5E 5.6 UPP_BACCL
21 PsiBlast_CBE 93.6670%-136 - C2 -1I5E 5.6 UPP_BACCL
96 HHSearch 92.1857%-134 - C2 -3DMP - UPP_BURPS -
94 HHSearch 91.4558%-138 - C2 -1V9S - UPP_THET2 -
2 PsiBlast_PDB 89.9356%-140 - C2 -1V9S - UPP_THET2 -
5 PsiBlast_PDB 89.1757%-133 - C2 -3DMP - UPP_BURPS -
27 PsiBlast_CBE 88.4856%-129 - C2 -2EHJ - UPP_ECOLI -
26 PsiBlast_CBE 88.1556%-127 - C2 -2EHJ - UPP_ECOLI -
99 HHSearch 87.7455%-135 - C2 -1O5O 6.8 UPP_THEMA
95 HHSearch 87.7355%-126 - C2 -2EHJ - UPP_ECOLI -
25 PsiBlast_CBE 87.4956%-127 - C2 -2EHJ - UPP_ECOLI -
3 PsiBlast_PDB 87.4055%-136 - C2 -1O5O 6.8 UPP_THEMA
23 PsiBlast_CBE 86.8955%-134 - C2 -1O5O 6.6 UPP_THEMA
4 PsiBlast_PDB 86.8856%-127 - C2 -2EHJ - UPP_ECOLI -
22 PsiBlast_CBE 86.2755%-137 - C2 -1O5O 6.4 UPP_THEMA
24 PsiBlast_CBE 86.0255%-137 - C2 -1O5O 6.3 UPP_THEMA
85 Fugue 80.7433%-124 - C2 -1BD3 - UPP_TOXGO -
100 HHSearch 79.9034%-127 - C2 -1BD3 - UPP_TOXGO -
28 PsiBlast_CBE 79.3139%-133 - C2 -2E55 - UPP_AQUAE -
39 PsiBlast_CBE 79.2336%-129 - C2 -1JLS 3.3 UPP_TOXGO
45 PsiBlast_CBE 78.9436%-130 - C2 -1BD4 3.2 UPP_TOXGO
36 PsiBlast_CBE 78.6636%-127 - C2 -1UPF 3.3 UPP_TOXGO
34 PsiBlast_CBE 78.6436%-128 - C2 -1UPF 4.3 UPP_TOXGO
64 PsiBlast_CBE 78.5434%-137 - C2 -1XTT 6.8 UPP_SULSO
16 PsiBlast_PDB 78.5334%-139 - C2 -1VST 5.1 UPP_SULSO
50 PsiBlast_CBE 78.5234%-147 - C2 -3G6W 3.5 UPP_SULSO
31 PsiBlast_CBE 78.4936%-129 - C2 -1UPU 4.8 UPP_TOXGO
93 HHSearch 78.1533%-122 - C2 -1XTT 7.4 UPP_SULSO
17 PsiBlast_PDB 78.1134%-132 - C2 -3G6W 5.2 UPP_SULSO
7 PsiBlast_PDB 77.9936%-130 - C2 -1UPU 4.4 UPP_TOXGO
43 PsiBlast_CBE 77.9136%-132 - C2 -1BD4 3.9 UPP_TOXGO
32 PsiBlast_CBE 77.7936%-129 - C2 -1UPU 4.8 UPP_TOXGO
63 PsiBlast_CBE 77.7334%-137 - C2 -1XTT 7.0 UPP_SULSO
37 PsiBlast_CBE 77.7036%-130 - C2 -1JLS 2.4 UPP_TOXGO
51 PsiBlast_CBE 77.6534%-143 - C2 -3G6W 3.2 UPP_SULSO
13 PsiBlast_PDB 77.6434%-133 - C2 -1XTT 7.4 UPP_SULSO
35 PsiBlast_CBE 77.4136%-130 - C2 -1UPF 2.8 UPP_TOXGO
62 PsiBlast_CBE 77.4034%-141 - C2 -1XTT 6.8 UPP_SULSO
44 PsiBlast_CBE 77.3036%-124 - C2 -1BD4 2.3 UPP_TOXGO
8 PsiBlast_PDB 77.2836%-128 - C2 -1UPF 4.3 UPP_TOXGO
11 PsiBlast_PDB 77.2336%-123 - C2 -1JLS 2.9 UPP_TOXGO
33 PsiBlast_CBE 77.2136%-123 - C2 -1UPU 5.4 UPP_TOXGO
10 PsiBlast_PDB 77.1436%-126 - C2 -1BD4 2.9 UPP_TOXGO
38 PsiBlast_CBE 76.9236%-126 * C2 *1JLS 3.0 UPP_TOXGO
49 PsiBlast_CBE 76.4734%-132 - C2 -3G6W 3.1 UPP_SULSO