@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu01130: (2016-06-02 )
MAKEKFDRSKSHANIGTIGHVDHGKTTLTAAITTVLHKKSGKGTAMAYDQIDGAPEERERGITISTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKNVGVPYIVVFLNKCDMVDDEELLELVEMEVRDLLSEYDFPGDDVPVVKGSALKALEGDAEWEAKIFELMDAVDEYIPTPERDTEKPFMMPVEDVFSITGRGTVATGRVERGQVKVGDEVEIIGLQEENKKTTVTGVEMFRKLLDYAEAGDNIGALLRGVSREEIQRGQVLAKPGTITPHSKFKAEVYVLSKEEGGRHTPFFSNYRPQFYFRTTDVTGIIHLPEGVEMVMPGDNTEMNVELISTIAIEEGTRFSIREGGRTVGSGVVSTITE

Atome Classification :

(53 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GNP_A_2(4LBW)
EFTU1_THETH
[Raw transfer]




GNP_A_3(2C77)
EFTU2_THET8
[Raw transfer]




GNP_A_2(4LBZ)
EFTU1_THETH
[Raw transfer]




GTP_A_3(3VMF)
EF1A_AERPE
[Raw transfer]




GNP_A_2(4LBV)
EFTU1_THETH
[Raw transfer]




GDP_H_6(1DG1)
EFTU2_ECOLI
[Raw transfer]




GNP_A_2(2C78)
EFTU1_THET8
[Raw transfer]




GNP_A_2(4H9G)
EFTU1_THETH
[Raw transfer]




GNP_A_3(1EXM)
EFTU1_THETH
[Raw transfer]




GNP_A_2(2C78)
EFTU1_THET8
[Raw transfer]




GNP_A_3(2BVN)
EFTU2_ECOLI
[Raw transfer]




GNP_A_2(4RCZ)
IF2G_SULSO
[Raw transfer]




GNP_A_2(4LC0)
EFTU1_THETH
[Raw transfer]




GNP_B_6(2BVN)
EFTU2_ECOLI
[Raw transfer]




GNP_P_9(1B23)
EFTU_THEAQ
[Raw transfer]




GNP_A_5(1OB2)
EFTU2_ECOLI
[Raw transfer]




GNP_A_3(1EFT)
EFTU_THEAQ
[Raw transfer]




GNP_A_7(3V11)
IF2G_SULSO
[Raw transfer]




GNP_A_2(4LBY)
EFTU1_THETH
[Raw transfer]




GDP_A_3(1HA3)
EFTU1_THET8
[Raw transfer]




GDP_A_6(1D8T)
EFTU1_ECOLI
[Raw transfer]




GDP_A_3(3U2Q)
?
[Raw transfer]




GDP_B_6(1EFC)
EFTU1_ECOLI
[Raw transfer]




GDP_B_(1D8T)
EFTU1_ECOLI
[Raw transfer]




GNP_A_5(2AHO)
IF2G_SULSO
[Raw transfer]




GDP_A_5(1EFC)
EFTU1_ECOLI
[Raw transfer]




GDP_G_5(1DG1)
EFTU2_ECOLI
[Raw transfer]




GDP_B_7(1HA3)
EFTU1_THET8
[Raw transfer]




GDP_A_4(4G5G)
EFTU1_ECOLI
[Raw transfer]




GDP_A_5(3U6K)
EFTU1_ECOLI
[Raw transfer]




GDP_A_3(2FX3)
EFTU1_ECOLI
[Raw transfer]




GDP_B_8(1TUI)
EFTU_THEAQ
[Raw transfer]




GDP_A_5(4ZV4)
EFTU_PSEAE
[Raw transfer]




GDP_C_9(1TUI)
EFTU_THEAQ
[Raw transfer]




GDP_K_10(4IW3)
EFTU1_PSEPK
[Raw transfer]




GDP_A_3(1ETU)
EFTU1_ECOLI
[Raw transfer]




GNP_A_3(4PC7)
EFTU1_ECOLI
[Raw transfer]




GDP_A_7(1TUI)
EFTU_THEAQ
[Raw transfer]




GDP_A_4(4P3Y)
?
[Raw transfer]




GNP_A_4(1KK1)
IF2G_PYRAB
[Raw transfer]




GDP_B_6(3WY9)
EF1A_PYRHO
[Raw transfer]




GDP_B_7(3U6K)
?
[Raw transfer]




GDP_A_5(2QN6)
IF2G_SULSO
[Raw transfer]




GDP_A_2(4RD6)
IF2G_SULSO
[Raw transfer]




GDP_B_7(4IW3)
EFTU1_PSEPK
[Raw transfer]




GDP_A_5(3WY9)
EF1A_PYRHO
[Raw transfer]




GDP_A_6(2QMU)
IF2G_SULSO
[Raw transfer]




GDP_B_7(4ZV4)
EFTU_PSEAE
[Raw transfer]




CHAIN_H_8(4CXG)
EF1A_AERPE
[Raw transfer]

-

CHAIN_H_8(4CXH)
EF1A_AERPE
[Raw transfer]

-

FMT_A_12(4RJL)
IF2G_SULSO
[Raw transfer]




GNP_C_3(2P8W)

[Raw transfer]




51 PsiBlast_CBE 96.0176% -93 - C1 -1D8T 8.6 EFTU1_ECOLI
9 PsiBlast_PDB 95.6177% -90 - C1 -4G5G 8.5 EFTU1_ECOLI
50 PsiBlast_CBE 95.3176% -97 - C1 -1D8T 8.8 EFTU1_ECOLI
29 PsiBlast_CBE 94.7476% -92 - C1 -1DG1 7.3 EFTU2_ECOLI
22 PsiBlast_CBE 94.7077% -92 - C1 -3U6K 5.8 ?
7 PsiBlast_PDB 94.7077% -94 - C1 -3U6K 7.2 EFTU1_ECOLI
45 PsiBlast_CBE 94.5876% -96 - C1 -1EFC 8.8 EFTU1_ECOLI
16 PsiBlast_PDB 94.1276% -94 - C1 -1DG1 8.3 EFTU2_ECOLI
48 PsiBlast_CBE 93.9176% -91 - C1 -2FX3 7.3 EFTU1_ECOLI
111 HHSearch 93.8875% -92 - C1 -2C78 9.5 EFTU1_THET8
44 PsiBlast_CBE 93.8476% -90 - C1 -1EFC 8.4 EFTU1_ECOLI
34 PsiBlast_CBE 93.5076%-102 - C1 -4PC3 - EFTU1_ECOLI -
8 PsiBlast_PDB 93.3877% -94 - C1 -3U2Q 7.1 ?
2 PsiBlast_PDB 93.3773% -93 - C1 -2C78 9.5 EFTU1_THET8
40 PsiBlast_CBE 93.2076% -97 - C1 -4P3Y 9.5 ?
5 PsiBlast_PDB 93.1273% -87 - C1 -1EXM 9.5 EFTU1_THETH
53 PsiBlast_CBE 93.0572% -92 - C1 -4ZV4 6.7 EFTU_PSEAE
18 PsiBlast_PDB 92.8773% -87 - C1 -4LBW 9.7 EFTU1_THETH
1 PsiBlast_PDB 92.8073% -88 - C1 -1EFT 9.3 EFTU_THEAQ
41 PsiBlast_CBE 92.7877% -88 * C1 *1OB2 6.9 EFTU2_ECOLI
3 PsiBlast_PDB 92.6873% -88 - C1 -4H9G 9.7 EFTU1_THETH
19 PsiBlast_PDB 92.6173% -88 - C1 -4LBY 9.4 EFTU1_THETH
30 PsiBlast_CBE 92.3673% -88 - C1 -4LC0 9.5 EFTU1_THETH
20 PsiBlast_PDB 92.2773% -84 - C1 -4LBZ 9.5 EFTU1_THETH
17 PsiBlast_PDB 92.2273% -87 - C1 -4LBV 9.6 EFTU1_THETH
43 PsiBlast_CBE 92.1976% -92 - C1 -2BVN 8.6 EFTU2_ECOLI
52 PsiBlast_CBE 92.1872% -91 - C1 -4ZV4 4.8 EFTU_PSEAE
23 PsiBlast_CBE 92.0972% -94 - C1 -1TUI 6.1 EFTU_THEAQ
4 PsiBlast_PDB 91.8373% -90 - C1 -2C77 9.9 EFTU2_THET8
42 PsiBlast_CBE 91.7676% -92 - C1 -2BVN 9.2 EFTU2_ECOLI
24 PsiBlast_CBE 91.5872% -92 - C1 -1TUI 6.7 EFTU_THEAQ
12 PsiBlast_PDB 91.5072% -87 - C1 -1B23 8.5 EFTU_THEAQ
11 PsiBlast_PDB 90.8772% -94 - C1 -1TUI 6.6 EFTU_THEAQ
6 PsiBlast_PDB 90.2373% -94 - C1 -1HA3 9.1 EFTU1_THET8
21 PsiBlast_CBE 89.8773% -97 - C1 -1HA3 8.3 EFTU1_THET8
59 PsiBlast_CBE 88.6770% -90 - C1 -4IW3 6.4 EFTU1_PSEPK
31 PsiBlast_CBE 88.3876% -97 - C1 -4PC7 7.7 EFTU1_ECOLI
58 PsiBlast_CBE 88.3370% -94 - C1 -4IW3 7.6 EFTU1_PSEPK
74 PsiBlast_CBE 69.8233% -71 - C1 -3VMF 8.5 EF1A_AERPE
75 PsiBlast_CBE 69.7333% -72 - C1 -4CXH 3.8 EF1A_AERPE
76 PsiBlast_CBE 69.2233% -72 - C1 -4CXG 3.4 EF1A_AERPE
73 PsiBlast_CBE 69.2236% -75 - C1 -3WY9 7.8 EF1A_PYRHO
103 Fugue 67.3530% -76 - C1 -1KK1 8.0 IF2G_PYRAB
72 PsiBlast_CBE 67.3236% -73 - C1 -3WY9 7.8 EF1A_PYRHO
49 PsiBlast_CBE 60.8376%-120 - C1 -1ETU 4.5 EFTU1_ECOLI
94 PsiBlast_CBE 51.9031% -64 - C1 -4RJL 2.8 IF2G_SULSO
92 PsiBlast_CBE 50.4431% -67 - C1 -2QMU 5.5 IF2G_SULSO
97 PsiBlast_CBE 50.3431% -66 - C1 -4RCZ 8.8 IF2G_SULSO
91 PsiBlast_CBE 49.5031% -82 - C1 -2QN6 6.4 IF2G_SULSO
95 PsiBlast_CBE 49.4431% -67 - C1 -4RD6 7.9 IF2G_SULSO
90 PsiBlast_CBE 48.6331% -64 - C1 -3V11 6.5 IF2G_SULSO
93 PsiBlast_CBE 47.9031% -75 - C1 -2AHO 7.1 IF2G_SULSO
109 Fugue 0.0051% 137 - C1 -2P8W 3.1