@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu14220: (2016-06-22 )
MAERMVGKQAPRFEMEAVLASKEFGKVSLEENMKNDKWTVLFFYPMDFTFVCPTEITAMSDRYDEFEDLDAEVIGVSTDTIHTHLAWINTDRKENGLGQLKYPLAADTNHEVSREYGVLIEEEGVALRGLFIINPEGELQYQTVFHNNIGRDVDETLRVLQALQTGGLCPANWKPGQKTL

Atome Classification :

(35 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_D_9(3QPM)
?
[Raw transfer]



GOL_B_7(3QPM)
?
[Raw transfer]



GOL_B_7(3QPM)
?
[Raw transfer]



QDO_B_6(4KW6)
?
[Raw transfer]



CPS_A_8(4XCS)
PRDX1_HUMAN
[Raw transfer]



CPS_D_10(4XCS)
PRDX1_HUMAN
[Raw transfer]



GOL_A_6(3QPM)
?
[Raw transfer]



GOL_C_8(3QPM)
?
[Raw transfer]



CPS_E_11(4XCS)
PRDX1_HUMAN
[Raw transfer]



QDO_C_7(4KW6)
?
[Raw transfer]



COM_D_9(4RQX)
PRDX4_HUMAN
[Raw transfer]



COM_A_6(4RQX)
PRDX4_HUMAN
[Raw transfer]



COM_E_10(4RQX)
PRDX4_HUMAN
[Raw transfer]



COM_C_8(4RQX)
PRDX4_HUMAN
[Raw transfer]



COM_B_7(4RQX)
PRDX4_HUMAN
[Raw transfer]
16 PsiBlast_PDB 92.3651%-140 - C1 -1QMV - PRDX2_HUMAN -
83 PsiBlast_CBE 92.2450%-134 - C1 -3SBC - TSA1_YEAST -
86 PsiBlast_CBE 91.6550%-134 - C1 -3SBC - TSA1_YEAST -
79 PsiBlast_CBE 91.2050%-132 - C1 -3SBC - TSA1_YEAST -
102 Fugue 90.6052%-130 - C1 -1QMV - PRDX2_HUMAN -
75 PsiBlast_CBE 90.4448%-145 - C1 -4K1F - ? -
80 PsiBlast_CBE 90.3350%-134 - C1 -3SBC - TSA1_YEAST -
5 PsiBlast_PDB 90.1751%-140 - C1 -4LLR - ? -
73 PsiBlast_CBE 90.1548%-145 - C1 -4K1F - ? -
87 PsiBlast_CBE 90.1450%-134 - C1 -3SBC - TSA1_YEAST -
72 PsiBlast_CBE 89.7148%-148 - C1 -4K1F - ? -
81 PsiBlast_CBE 89.2350%-131 - C1 -3SBC - TSA1_YEAST -
82 PsiBlast_CBE 89.0850%-132 - C1 -3SBC - TSA1_YEAST -
76 PsiBlast_CBE 89.0748%-144 - C1 -4K1F - ? -
8 PsiBlast_PDB 88.9749%-162 - C1 -4MH2 - PRDX3_BOVIN -
84 PsiBlast_CBE 88.9450%-129 - C1 -3SBC - TSA1_YEAST -
122 HHSearch 88.8348%-128 - C1 -4K1F - ? -
28 PsiBlast_CBE 88.7648%-138 - C1 -4XCS - PRDX1_HUMAN -
44 PsiBlast_CBE 88.6749%-163 - C1 -4MH2 - PRDX3_BOVIN -
36 PsiBlast_CBE 88.6749%-159 - C1 -4MH3 - PRDX3_BOVIN -
22 PsiBlast_CBE 87.1451%-146 - C1 -4KW6 3.7 ?
52 PsiBlast_CBE 86.3747%-128 - C1 -3QPM 3.0 ?
13 PsiBlast_PDB 86.2947%-131 - C1 -3QPM 2.9 ?
51 PsiBlast_CBE 85.5347%-126 - C1 -3QPM 3.0 ?
23 PsiBlast_CBE 85.4851%-139 - C1 -4KW6 3.8 ?
50 PsiBlast_CBE 85.2547%-132 - C1 -3QPM 2.9 ?
128 HHSearch 85.1749%-129 - C1 -3QPM 2.9 ?
60 PsiBlast_CBE 84.9748%-147 - C1 -4RQX 2.3 PRDX4_HUMAN
6 PsiBlast_PDB 84.9648%-147 - C1 -4XCS 3.5 PRDX1_HUMAN
61 PsiBlast_CBE 84.6148%-144 - C1 -4RQX 2.2 PRDX4_HUMAN
27 PsiBlast_CBE 84.5048%-145 - C1 -4XCS 3.5 PRDX1_HUMAN
59 PsiBlast_CBE 84.4948%-143 - C1 -4RQX 2.1 PRDX4_HUMAN
24 PsiBlast_CBE 84.4948%-140 - C1 -4XCS 3.9 PRDX1_HUMAN
62 PsiBlast_CBE 83.9148%-142 - C1 -4RQX 2.2 PRDX4_HUMAN
58 PsiBlast_CBE 83.5248%-146 - C1 -4RQX 2.2 PRDX4_HUMAN