@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu14300: (2016-06-22 )
MERFEITKTPINTENIIKKVEKREAGAITTFIGTVREWTNGKRTVRLEYEAYEPMAVQMLAQIGAEIEEKWEGASAAITHRIGVLDIGEAAVVIAVSSPHRKAAYEANEYAIERIKQIVPIWKKEIWEDGEQWIGDQLETTAYPNGKPDLSEGEQHD

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_B_13(1NVJ)
MOAE_ECOLI
[Raw transfer]




8CS_H_11(2QIE)
MOAE_STAAN
[Raw transfer]




8CS_A_9(2QIE)
MOAE_STAAN
[Raw transfer]




8CS_K_12(2QIE)
MOAE_STAAN
[Raw transfer]




8CS_E_10(2QIE)
MOAE_STAAN
[Raw transfer]




GOL_D_3(2Q5W)
MOAE_STAAN
[Raw transfer]




GOL_D_3(2Q5W)
MOAE_STAAN
[Raw transfer]




GOL_B_9(2OMD)
MOAE_AQUAE
[Raw transfer]




FMT_E_22(1NVJ)
MOAE_ECOLI
[Raw transfer]




FMT_D_24(1NVJ)
MOAE_ECOLI
[Raw transfer]




FMT_F_21(1NVJ)
MOAE_ECOLI
[Raw transfer]




FMT_B_23(1NVJ)
MOAE_ECOLI
[Raw transfer]




TRS_A_6(2OMD)
MOAE_AQUAE
[Raw transfer]




17 PsiBlast_CBE 90.5662%-105 - C3 -2QIE 3.0 MOAE_STAAN
1 PsiBlast_PDB 90.4362% -99 - C3 -2Q5W 2.9 MOAE_STAAN
15 PsiBlast_CBE 89.9462%-111 - C3 -2QIE 4.1 MOAE_STAAN
2 PsiBlast_PDB 89.8362%-101 - C3 -2QIE 4.1 MOAE_STAAN
28 HHSearch 89.7660% -99 - C3 -2Q5W 2.9 MOAE_STAAN
16 PsiBlast_CBE 89.7662%-119 - C3 -2QIE 4.0 MOAE_STAAN
32 HHSearch 82.4241%-142 - C3 -4AP8 - MOC2B_HUMAN -
18 PsiBlast_CBE 77.1543%-132 - C3 -2WP4 - MOAE1_MYCTU -
29 HHSearch 76.6642%-137 * C3 *2WP4 - MOAE1_MYCTU -
3 PsiBlast_PDB 76.2743%-143 - C3 -2WP4 - MOAE1_MYCTU -
21 PsiBlast_CBE 75.4848%-152 - C3 -4AP8 - MOC2B_HUMAN -
31 HHSearch 75.4731%-123 - C3 -2OMD - MOAE_AQUAE -
19 PsiBlast_CBE 75.4148%-157 - C3 -4AP8 - MOC2B_HUMAN -
20 PsiBlast_CBE 75.1748%-149 - C3 -4AP8 - MOC2B_HUMAN -
4 PsiBlast_PDB 73.3548%-149 - C3 -4AP8 - MOC2B_HUMAN -
30 HHSearch 70.5429%-119 - C3 -1FM0 - MOAE_ECOLI -
11 PsiBlast_PDB 70.4324%-154 - C3 -3RPF - MOAE_HELPY -
5 PsiBlast_PDB 70.2635%-155 - C3 -1NVJ Error MOAE_ECOLI
38 Fugue 70.1529%-107 - C3 -1FM0 - MOAE_ECOLI -
7 PsiBlast_PDB 69.9035%-127 - C3 -1FMA - MOAE_ECOLI -
23 PsiBlast_CBE 69.2435%-150 - C3 -1NVJ 3.0 MOAE_ECOLI
26 PsiBlast_CBE 68.6335%-139 - C3 -1NVJ 3.2 MOAE_ECOLI
10 PsiBlast_PDB 68.1636%-107 - C3 -2OMD 2.4 MOAE_AQUAE
22 PsiBlast_CBE 67.3035%-147 - C3 -1NVJ 3.1 MOAE_ECOLI
24 PsiBlast_CBE 65.5135%-126 - C3 -1NVJ 3.2 MOAE_ECOLI
27 PsiBlast_CBE 65.1036% -92 - C3 -2OMD 2.1 MOAE_AQUAE