@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu25290: (2016-07-10 )
MNEKNIKHSQNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSYKIFGNIPYNISTDIIRKIVFDSIADEIYLIVEYGFAKRLLNTKRSLALFLMAEVDISILSMVPREYFHPKPKVNSSLIRLNRKKSRISHKDKQKYNYFVMKWVNKEYKKIFTKNQFNNSLKHAGIDDLNNISFEQFLSLFNSYKLFNK

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAH_D_4(1QAN)
ERM_BACIU
[Raw transfer]




SAM_B_2(1QAO)
ERM_BACIU
[Raw transfer]




SFG_B_2(1QAQ)
ERM_BACIU
[Raw transfer]




ADN_A_2(3GRV)
RSMA_METJA
[Raw transfer]




AMP_A_2(3GRU)
RSMA_METJA
[Raw transfer]




5 PsiBlast_PDB 98.94100%-140 - C1 -1QAQ 7.3 ERM_BACIU
2 PsiBlast_PDB 98.94100%-139 - C1 -1QAM - ERM_BACIU -
3 PsiBlast_PDB 98.81100%-138 - C1 -1QAN 7.5 ERM_BACIU
4 PsiBlast_PDB 98.71100%-137 - C1 -1QAO 8.3 ERM_BACIU
1 PsiBlast_PDB 93.63100%-146 - C1 -2ERC - ERM_BACIU -
36 HHSearch 89.8299% -43 - C1 -1QAM - ERM_BACIU -
25 Fugue 86.1899% -50 - C1 -2ERC - ERM_BACIU -
6 PsiBlast_PDB 74.7850%-122 - C1 -1YUB - ERM_STREE -
37 HHSearch 69.6251% -27 - C1 -1YUB - ERM_STREE -
15 PsiBlast_PDB 64.2127% -18 - C1 -3TPZ - RSMA_ECOLI -
14 PsiBlast_PDB 64.0027% -13 - C1 -4ADV - RSMA_ECOLI -
13 PsiBlast_PDB 64.0027% -13 - C1 -1QYR - RSMA_ECOLI -
43 HHSearch 62.6324% -17 - C1 -1QYR - RSMA_ECOLI -
46 HHSearch 57.6022% -14 - C1 -1ZQ9 - DIM1_HUMAN -
38 HHSearch 56.7521% 8 - C1 -3UZU - RSMA_BURPS -
20 PsiBlast_PDB 56.6127% -3 - C- -3FTD - RSMA_AQUAE -
11 PsiBlast_PDB 56.5231% -36 - C1 -3FYC - RSMA_METJA -
18 PsiBlast_PDB 56.3927% 8 - C1 -3R9X - RSMA_AQUAE -
41 HHSearch 56.3524% -21 - C1 -3TQS - RSMA_COXBU -
16 PsiBlast_PDB 56.3525% -36 - C1 -3TQS - RSMA_COXBU -
9 PsiBlast_PDB 54.7631% -28 - C1 -3GRV 5.6 RSMA_METJA
8 PsiBlast_PDB 54.0431% -30 - C1 -3GRU 5.3 RSMA_METJA