@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu29540: (2016-07-17 )
MTDQRRNVYFFHKQDQETNEQARSLTQLAEEHGFTVVNQHSDANIIASIGGDGTFLQAVRKTNFRDDCLYVGITKKGKAHLYCDFHSDEREKMVDAMTFEQIEVRKYPLIEVTVDQASPFHCLNEVSIRSSIIKTFVMDVLIDDLHFETFRGDGMIISTPTGSTAYNKSVAGAVVDPLLPCMQVSELASLNNNTYRTLGSPFVLSSDRKLTLRVVQDGNEHPIIGLDNEALSTRNVKTIEIKLSNKKIKTVKLKDNSFWEKVKRTFL

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

A22_A_2(4DY6)
NADK1_LISMO
[Raw transfer]




NAD_A_2(2I29)
NADK1_LISMO
[Raw transfer]




DTA_A_2(2I2C)
NADK1_LISMO
[Raw transfer]




DTA_A_2(2I2C)
NADK1_LISMO
[Raw transfer]




DTA_A_2(2Q5F)
NADK1_LISMO
[Raw transfer]




A2D_A_2(2I2D)
NADK1_LISMO
[Raw transfer]




ZNB_A_3(3V8P)
NADK1_LISMO
[Raw transfer]




NAD_A_3(2I2F)
NADK1_LISMO
[Raw transfer]




NAP_A_2(2I2A)
NADK1_LISMO
[Raw transfer]




GOL_A_5(3V7W)
NADK1_LISMO
[Raw transfer]




GOL_A_5(3V7U)
NADK1_LISMO
[Raw transfer]




ZAS_A_3(3V7W)
NADK1_LISMO
[Raw transfer]




A3N_A_4(3V7Y)
NADK1_LISMO
[Raw transfer]




ZAS_A_2(3V7W)
NADK1_LISMO
[Raw transfer]




CC5_A_3(2I2B)
NADK1_LISMO
[Raw transfer]




AOC_A_3(3V80)
NADK1_LISMO
[Raw transfer]




MTA_A_2(3V7U)
NADK1_LISMO
[Raw transfer]




Z8B_A_2(3V8M)
NADK1_LISMO
[Raw transfer]




5NB_A_2(3V8R)
NADK1_LISMO
[Raw transfer]




5CI_A_3(3V8N)
NADK1_LISMO
[Raw transfer]




A3N_A_3(3V7Y)
NADK1_LISMO
[Raw transfer]




5N5_A_2(3V8Q)
NADK1_LISMO
[Raw transfer]




AOC_A_2(3V80)
NADK1_LISMO
[Raw transfer]




MTA_A_3(3V7U)
NADK1_LISMO
[Raw transfer]




5NB_A_3(3V8R)
NADK1_LISMO
[Raw transfer]




Z8B_A_3(3V8M)
NADK1_LISMO
[Raw transfer]




CC5_A_2(2I2B)
NADK1_LISMO
[Raw transfer]




38 HHSearch 77.2835% -1 - C1 -2I2C 6.2 NADK1_LISMO
4 PsiBlast_PDB 74.8037% -3 - C1 -2I2B 4.0 NADK1_LISMO
1 PsiBlast_PDB 74.4937% -3 - C1 -2I1W - NADK1_LISMO -
7 PsiBlast_PDB 73.9337% -2 - C1 -4DY6 5.6 NADK1_LISMO
15 PsiBlast_PDB 73.8837% -3 - C1 -2Q5F 5.4 NADK1_LISMO
6 PsiBlast_PDB 73.8237% -7 - C1 -2I2D 6.8 NADK1_LISMO
9 PsiBlast_PDB 73.5337% 3 - C1 -3V7W 5.5 NADK1_LISMO
14 PsiBlast_PDB 73.0537% 1 - C1 -3V8P 7.4 NADK1_LISMO
5 PsiBlast_PDB 72.8337% 23 - C1 -2I2C 5.7 NADK1_LISMO
23 PsiBlast_CBE 72.6337% -1 - C1 -2I1W - NADK1_LISMO -
12 PsiBlast_PDB 71.6937% 4 - C1 -3V8M 4.3 NADK1_LISMO
18 PsiBlast_PDB 71.2837% 20 - C1 -2I2F 5.0 NADK1_LISMO
8 PsiBlast_PDB 71.1837% 24 - C1 -3V7U 5.6 NADK1_LISMO
21 PsiBlast_CBE 70.6437% 23 - C1 -2I1W - NADK1_LISMO -
10 PsiBlast_PDB 70.5737% 19 - C1 -3V7Y 4.1 NADK1_LISMO
17 PsiBlast_PDB 70.5537% 0 - C1 -3V8R 4.4 NADK1_LISMO
13 PsiBlast_PDB 70.5037% 27 - C1 -3V8N 4.2 NADK1_LISMO
3 PsiBlast_PDB 70.5037% 21 - C1 -2I2A 5.6 NADK1_LISMO
16 PsiBlast_PDB 70.4037% 27 - C1 -3V8Q 3.3 NADK1_LISMO
11 PsiBlast_PDB 70.3637% 26 - C1 -3V80 5.5 NADK1_LISMO
2 PsiBlast_PDB 70.0337% -3 - C1 -2I29 5.1 NADK1_LISMO