@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu30950: (2016-07-21 )
MKILFAVSECTPFVKSGGLADVAGALPKALARLGNEVAVMLPKYSQIPEPWKKRMKKQAECTVAVGWRQQYCGIEHMAENDVNYYFIDNEYYFNRDSLYGHYDDGERFAFFSRAVLEAAKVVNVQADIVHTHDWHTAMVNYLLKEEYRKHPFYERMKSVLTIHNLQFQGIFPPDVTHDLLGLEMDHFHYERLECNGFVNFMKAGIIAADHVTTVSPTYRNEIMTPYYGEQLEQVLQYREDDVTGILNGIDDTFYQPKSDPYIEAQYDSGDLACKLENKTKLQQRMGLPEKNDIPLISMVTRLTKQKGLDLVRRIMHELLEEQDIQLVVLGTGEREFEDYFRYAEFAFHEKCRAYIGFDEPLAHQIYAGSDMFLMPSKFEPCGLGQLIALQYGAIPIVRETGGLYDTVRAYQEEEGTGNGFTFSAFNAHDLKFTIERALSFYCQQDVWKSIVKTAMNADYSWGKSAKEYQRIFEQVTRSGRDVLE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_3(2QZS)
GLGA_ECOLI
[Raw transfer]



ADP_A_3(2QZS)
GLGA_ECOLI
[Raw transfer]



ADP_A_3(2R4U)
GLGA_ECOLI
[Raw transfer]



ADP_A_3(2R4T)
GLGA_ECOLI
[Raw transfer]



ADP_A_2(3GUH)
GLGA_ECOLI
[Raw transfer]



ADP_A_3(3COP)
GLGA_ECOLI
[Raw transfer]



ADP_A_2(3VUF)
SSG1_ORYSJ
[Raw transfer]



250_A_4(3COP)
GLGA_ECOLI
[Raw transfer]



250_A_4(2QZS)
GLGA_ECOLI
[Raw transfer]



ADP_D_4(1RZU)
GLGA1_RHIRD
[Raw transfer]



SUGAR_A_2(3CX4)
GLGA_ECOLI
[Raw transfer]
-
GOL_A_4(3L01)
?
[Raw transfer]



ADP_C_3(1RZU)
GLGA1_RHIRD
[Raw transfer]



ADP_C_3(1RZU)
GLGA1_RHIRD
[Raw transfer]



ADP_C_3(1RZU)
GLGA1_RHIRD
[Raw transfer]
33 HHSearch 82.7637% -37 * C2 *2QZS 8.8 GLGA_ECOLI
3 PsiBlast_PDB 81.3436% -27 - C2 -2QZS 8.8 GLGA_ECOLI
7 PsiBlast_PDB 80.5636% -28 - C2 -3COP 7.1 GLGA_ECOLI
5 PsiBlast_PDB 80.3436% -26 - C2 -2R4U 8.4 GLGA_ECOLI
8 PsiBlast_PDB 79.8536% -28 - C2 -3CX4 2.6 GLGA_ECOLI
4 PsiBlast_PDB 79.8036% -26 - C2 -2R4T 8.7 GLGA_ECOLI
6 PsiBlast_PDB 78.0536% -25 - C2 -3GUH 8.0 GLGA_ECOLI
35 HHSearch 77.8033% -44 - C2 -1RZU 3.6 GLGA1_RHIRD
9 PsiBlast_PDB 77.7933% -26 - C2 -1RZU 3.5 GLGA1_RHIRD
21 PsiBlast_CBE 77.1833% -22 - C2 -1RZU 6.0 GLGA1_RHIRD
22 Fugue 76.6633% -22 - C2 -1RZU 3.5 GLGA1_RHIRD
2 PsiBlast_PDB 75.7836% -22 - C- -3D1J - GLGA_ECOLI -
10 PsiBlast_PDB 75.5333% -25 - C2 -1RZV - GLGA1_RHIRD -
1 PsiBlast_PDB 73.3534% -10 - C2 -4HLN - ? -
11 PsiBlast_PDB 72.5831% -9 - C2 -3VUE - SSG1_ORYSJ -
39 HHSearch 72.3435% 9 - C2 -4HLN - ? -
12 PsiBlast_PDB 70.9031% -10 - C2 -3VUF 5.2 SSG1_ORYSJ
14 PsiBlast_PDB 67.0027% -39 - C2 -3FRO - ? -
13 PsiBlast_PDB 66.7527% -35 - C2 -3L01 3.3 ?
15 PsiBlast_PDB 65.1227% -30 - C2 -2BIS - ? -