@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1843c: (2016-05-05 )
MMRFLDGHPPGYDLTYNDVFIVPNRSEVASRFDVDLSTADGSGTTIPVVVANMTAVAGRRMAETVARRGGIVILPQDLPIPAVKQTVAFVKSRDLVLDTPVTLAPDDSVSDAMALIHKRAHGVAVVILEGRPIGLVRESSCLGVDRFTRVRDIAVTDYVTAPAGTEPRKIFDLLEHAPVDVAVLTDADGTLAGVLSRTGAIRAGIYTPATDSAGRLRIGAAVGINGDVGAKARALAEAGVDVLVIDTAHGHQVKTLDAIKAVSALDLGLPLAAGNVVSAEGTRDLLKAGANVVKVGVGPGAMCTTRMMTGVGRPQFSAVLECASAARQLGGHIWADGGIRHPRDVALALAAGASNVMIGSWFAGTYESPGDLMRDRDDQPYKESYGMASKRAVVARTGADNPFDRARKALFEEGISTSRMGLDPDRGGVEDLIDHITSGVRSTCTYVGASNLAELHERAVVGVQSGAGFAEGHPLPAGW

Atome Classification :

(42 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_A_4(4X3Z)
?
[Raw transfer]




NAJ_A_4(4QNE)
?
[Raw transfer]




NAD_A_4(4X3Z)
?
[Raw transfer]




NAD_B_8(4X3Z)
?
[Raw transfer]




NAJ_B_7(4QNE)
?
[Raw transfer]




IMP_B_6(4IX2)
?
[Raw transfer]




IMP_A_5(4IX2)
?
[Raw transfer]




IMP_D_11(4IX2)
?
[Raw transfer]




FMT_A_7(4FEZ)
?
[Raw transfer]




FMT_B_12(4FEZ)
?
[Raw transfer]




IMP_C_8(4IX2)
?
[Raw transfer]




2F1_C_20(4MZ1)
?
[Raw transfer]




IMP_B_12(4MY8)
?
[Raw transfer]




2F1_B_12(4MZ1)
?
[Raw transfer]




2EY_A_4(4MYA)
?
[Raw transfer]




IMP_B_6(4FO4)
?
[Raw transfer]




IMP_A_3(4FO4)
?
[Raw transfer]




IMP_A_2(4FXS)
?
[Raw transfer]




IMP_A_2(1ZFJ)
IMDH_STRPY
[Raw transfer]




XMP_A_2(4QQ3)
?
[Raw transfer]




IMP_A_2(4R7J)
?
[Raw transfer]




XMP_A_3(2CU0)
IMDH_PYRHO
[Raw transfer]




Q21_B_18(4MY8)
?
[Raw transfer]




NAD_A_3(4ZQM)

[Raw transfer]




Q21_B_13(4MY8)
?
[Raw transfer]




IMP_A_3(3USB)
?
[Raw transfer]




IMP_A_2(5AHN)
?
[Raw transfer]




2EY_B_8(4MYA)
?
[Raw transfer]




MOA_A_3(4AF0)
?
[Raw transfer]




IMP_A_2(5AHN)
?
[Raw transfer]




2 PsiBlast_PDB 94.9538% -90 - C1 -3TSB - ? -
118 HHSearch 93.6535% -92 - C1 -1ZFJ 5.1 IMDH_STRPY
3 PsiBlast_PDB 93.3038%-101 - C1 -3TSD - ? -
4 PsiBlast_PDB 92.7136%-108 - C1 -3USB - ? -
117 HHSearch 92.1636%-103 - C1 -3USB 4.3 ?
121 HHSearch 91.4834% -96 - C1 -4FXS 5.6 ?
5 PsiBlast_PDB 90.5735% -89 - C1 -1ZFJ - IMDH_STRPY -
71 PsiBlast_CBE 88.2332%-111 - C1 -4DQW - ? -
8 PsiBlast_PDB 86.9433% -93 - C1 -4FXS - ? -
70 PsiBlast_CBE 85.8532%-114 - C1 -4DQW - ? -
133 HHSearch 84.0038% -89 - C1 -4R7J 5.6 ?
119 HHSearch 81.1629% -86 - C1 -1ME8 - IMDH_TRIFO -
123 HHSearch 81.1031% -90 - C1 -2CU0 5.8 IMDH_PYRHO
6 PsiBlast_PDB 80.9932% -85 - C1 -2CU0 - IMDH_PYRHO -
125 HHSearch 79.9336% -97 - C1 -1VRD - ? -
1 PsiBlast_PDB 79.3037% -94 - C1 -1VRD - ? -
126 HHSearch 79.2832% -99 - C1 -1EEP - IMDH_BORBU -
128 HHSearch 77.7735% -98 - C1 -3FFS - IMDH_CRYPV -
122 HHSearch 77.4934%-104 - C1 -5AHN 4.6 ?
120 HHSearch 77.1628% -88 - C1 -4AF0 3.4 ?
69 PsiBlast_CBE 75.6632%-104 - C1 -5AHN 4.6 ?
31 PsiBlast_CBE 66.4944% -80 - C1 -4MYA 4.1 ?
41 PsiBlast_CBE 66.0544% -78 - C1 -4MY8 5.5 ?
40 PsiBlast_CBE 65.8144% -78 - C1 -4MY8 5.0 ?
49 PsiBlast_CBE 65.2043% -77 - C1 -4MZ1 4.1 ?
77 PsiBlast_CBE 65.1341% -80 - C1 -4IX2 4.7 ?
78 PsiBlast_CBE 64.9341% -77 - C1 -4IX2 4.7 ?
50 PsiBlast_CBE 64.8943% -80 - C1 -4MZ1 3.8 ?
82 PsiBlast_CBE 64.4041% -76 - C1 -4FO4 5.0 ?
80 PsiBlast_CBE 64.0941% -77 - C1 -4IX2 4.7 ?
79 PsiBlast_CBE 64.0041% -76 - C1 -4IX2 4.1 ?
81 PsiBlast_CBE 63.5941% -76 - C1 -4FO4 5.4 ?
74 PsiBlast_CBE 63.4241% -89 - C1 -4QQ3 6.1 ?
76 PsiBlast_CBE 63.3441% -73 - C1 -4QNE 5.2 ?
73 PsiBlast_CBE 63.2741% -73 - C1 -4X3Z 6.1 ?
75 PsiBlast_CBE 63.1541% -75 - C1 -4QNE 4.9 ?
72 PsiBlast_CBE 62.5641% -73 - C1 -4X3Z 5.1 ?
61 PsiBlast_CBE 62.0242% -80 - C1 -4FEZ 3.1 ?
19 PsiBlast_PDB 61.9642% -82 - C1 -4FEZ 3.2 ?
134 HHSearch 61.3544% -73 - C1 -4MYA 4.0 ?
127 HHSearch 59.6740% -69 - C1 -4X3Z 5.9 ?
130 HHSearch 56.0241% -74 * C1 *4ZQM 5.7