@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2335: (2016-05-09 )
MLTAMRGDIRAARERDPAAPTALEVIFCYPGVHAVWGHRLAHWLWQRGARLLARAAAEFTRILTGVDIHPGAVIGARVFIDHATGVVIGETAEVGDDVTIYHGVTLGGSGMVGGKRHPTVGDRVIIGAGAKVLGPIKIGEDSRIGANAVVVKPVPPSAVVVGVPGQVIGQSQPSPGGPFDWRLPDLVGASLDSLLTRVARLEALGGGPQAAGVIRPPEAGIWHGEDFSI

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CYS_B_8(4H7O)
?
[Raw transfer]




CYS_A_6(4H7O)
?
[Raw transfer]




CYS_B_4(1T3D)
CYSE_ECOLI
[Raw transfer]




SER_B_5(4N69)
?
[Raw transfer]




SER_A_2(3Q1X)
?
[Raw transfer]




SER_A_2(3Q1X)
?
[Raw transfer]




CYS_A_2(3P47)
?
[Raw transfer]




COA_G_7(1SST)
CYSE_HAEIN
[Raw transfer]




COA_I_9(1SST)
CYSE_HAEIN
[Raw transfer]




COA_A_3(4HZD)
?
[Raw transfer]




COA_A_3(4HZD)
?
[Raw transfer]




COA_I_9(1SST)
CYSE_HAEIN
[Raw transfer]




COA_K_11(1SST)
CYSE_HAEIN
[Raw transfer]




COA_G_7(1SST)
CYSE_HAEIN
[Raw transfer]




CYS_A_5(1SSQ)
CYSE_HAEIN
[Raw transfer]




CYS_B_8(4H7O)
?
[Raw transfer]




CYS_A_5(1SSQ)
CYSE_HAEIN
[Raw transfer]




CYS_A_5(1SSQ)
CYSE_HAEIN
[Raw transfer]




CYS_A_5(1SSQ)
CYSE_HAEIN
[Raw transfer]




CYS_A_6(4H7O)
?
[Raw transfer]




CYS_A_6(4H7O)
?
[Raw transfer]




110 Fugue 93.1243%-123 - C2 -1SSQ 3.7 CYSE_HAEIN
40 PsiBlast_CBE 82.5447%-129 - C2 -4H7O 2.7 ?
45 PsiBlast_CBE 82.2944%-132 - C2 -3GVD - ? -
120 HHSearch 82.2346%-122 - C2 -4H7O 3.7 ?
13 PsiBlast_PDB 82.2046%-127 - C2 -3P47 2.9 ?
28 PsiBlast_CBE 82.1145%-127 - C2 -4HZD - ? -
55 PsiBlast_CBE 81.6444%-123 - C2 -3GVD - ? -
46 PsiBlast_CBE 81.5944%-128 - C2 -3GVD - ? -
25 PsiBlast_CBE 81.2847%-132 - C2 -4N6B - ? -
118 HHSearch 81.1945%-123 - C2 -4HZD 5.1 ?
122 HHSearch 81.0943%-120 - C2 -1SSQ 3.7 CYSE_HAEIN
54 PsiBlast_CBE 81.0444%-130 - C2 -3GVD - ? -
44 PsiBlast_CBE 80.8044%-125 - C2 -1SSQ 3.6 CYSE_HAEIN
51 PsiBlast_CBE 80.7744%-124 - C2 -3GVD - ? -
12 PsiBlast_PDB 80.7544%-128 - C2 -3GVD - ? -
121 HHSearch 80.7344%-129 - C2 -3Q1X 2.5 ?
41 PsiBlast_CBE 80.6647%-123 - C2 -4H7O 3.6 ?
53 PsiBlast_CBE 80.6444%-126 - C2 -3GVD - ? -
4 PsiBlast_PDB 80.5345%-125 - C2 -4HZD 5.0 ?
27 PsiBlast_CBE 80.4947%-130 - C2 -4N69 3.5 ?
14 PsiBlast_PDB 80.3846%-127 - C2 -3Q1X 2.5 ?
6 PsiBlast_PDB 80.2547%-123 * C2 *4H7O 3.7 ?
43 PsiBlast_CBE 79.8244%-134 - C2 -1SST 4.7 CYSE_HAEIN
42 PsiBlast_CBE 79.4844%-133 - C2 -1SST 4.2 CYSE_HAEIN
8 PsiBlast_PDB 79.4644%-121 - C2 -1SSQ 3.7 CYSE_HAEIN
9 PsiBlast_PDB 79.0146%-126 - C2 -1T3D 3.5 CYSE_ECOLI
7 PsiBlast_PDB 78.4644%-137 - C2 -1SST 4.3 CYSE_HAEIN