@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3628: (2016-05-21 )
MQFDVTIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLLPQPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHFFVHYKDLEPGKFVKAADWVDRAEAEAEVQRSVERFKAGTH

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

POP_A_11(2AUU)
IPYR_ECOLI
[Raw transfer]




POP_A_14(2AU6)
IPYR_ECOLI
[Raw transfer]




PPV_B_15(3Q9M)
?
[Raw transfer]




POP_A_13(2AU9)
IPYR_ECOLI
[Raw transfer]




PPV_A_7(3Q9M)
?
[Raw transfer]




POP_A_10(1I6T)
IPYR_ECOLI
[Raw transfer]




2PN_A_3(5C5V)
?
[Raw transfer]




POP_A_4(3Q4W)
?
[Raw transfer]




EDO_B_5(4ECP)
IPYR_MYCLE
[Raw transfer]




EDO_A_3(4ECP)
IPYR_MYCLE
[Raw transfer]




1 PsiBlast_PDB 98.50100% -96 - C9 -1WCF - IPYR_MYCTU -
45 PsiBlast_CBE 97.07100% -89 - C9 -4Z70 - IPYR_MYCTU -
40 PsiBlast_CBE 96.87100% -97 - C9 -4Z73 - IPYR_MYCTU -
21 PsiBlast_CBE 96.44100% -89 - C9 -4Z74 - IPYR_MYCTU -
5 PsiBlast_PDB 96.40100% -88 - C9 -4Z72 - IPYR_MYCTU -
4 PsiBlast_PDB 96.35100% -88 - C9 -4Z71 - IPYR_MYCTU -
3 PsiBlast_PDB 96.15100% -88 - C9 -4Z70 - IPYR_MYCTU -
44 PsiBlast_CBE 96.13100% -88 - C9 -4Z71 - IPYR_MYCTU -
41 PsiBlast_CBE 95.90100% -88 - C9 -4Z73 - IPYR_MYCTU -
32 PsiBlast_CBE 95.86100% -89 - C9 -4Z73 - IPYR_MYCTU -
31 PsiBlast_CBE 95.76100% -93 - C9 -4Z74 - IPYR_MYCTU -
127 HHSearch 95.65100% -89 - C9 -1SXV - IPYR_MYCTU -
2 PsiBlast_PDB 95.65100% -89 - C9 -1SXV - IPYR_MYCTU -
46 PsiBlast_CBE 95.47100% -91 - C9 -4Z70 - IPYR_MYCTU -
7 PsiBlast_PDB 95.45100% -89 - C9 -4Z74 - IPYR_MYCTU -
6 PsiBlast_PDB 95.44100% -90 - C9 -4Z73 - IPYR_MYCTU -
43 PsiBlast_CBE 95.31100% -89 - C9 -4Z71 - IPYR_MYCTU -
47 PsiBlast_CBE 95.1599% -91 - C9 -2UXS - IPYR_MYCTU -
48 PsiBlast_CBE 95.1299% -93 - C9 -2UXS - IPYR_MYCTU -
42 PsiBlast_CBE 94.90100% -93 - C9 -4Z73 - IPYR_MYCTU -
49 PsiBlast_CBE 92.7689% -89 - C9 -4ECP 3.2 IPYR_MYCLE
9 PsiBlast_PDB 92.2289% -88 - C9 -4ECP 3.1 IPYR_MYCLE
114 PsiBlast_CBE 74.4945% -76 - C9 -1I6T 3.3 IPYR_ECOLI
61 PsiBlast_CBE 73.0549% -74 - C9 -3Q9M 3.5 ?
14 PsiBlast_PDB 72.5949% -72 - C9 -3Q9M 2.9 ?
110 PsiBlast_CBE 72.1045% -76 - C9 -2AU6 3.5 IPYR_ECOLI
12 PsiBlast_PDB 71.9149% -72 - C9 -3Q4W 3.2 ?
107 PsiBlast_CBE 71.8045% -71 - C9 -2AUU 2.9 IPYR_ECOLI
108 PsiBlast_CBE 71.6645% -73 - C9 -2AU9 2.9 IPYR_ECOLI