@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA2951: (2016-02-12 )
MAILVIAEHNNAALAAATLNTVAAAKAIGGDIHVLVAGQNVAAVAEAAAKVEGVSKVLVADNAAYAHQLPENVAPLIAELGKNYSHVLAPATTNGKNFLPRVAALLDVDQISEIVEVVSPDTFKRPIYAGNAIATVQSSAAVKVITVRTTGFDAVAAEGGSAAVEQVSGPADAGKSAFVGEELAKSDRPELTAAKIVVSGGRGMQNGDNFKILYALADKLGAAVGASRAAVDAGFVPNDMQVGQTGKIVAPQLYIAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFQVADYGLVADLFDAVPELEKAV

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_C_3(1EFV)
ETFA_HUMAN
[Raw transfer]




FAD_C_3(1EFV)
ETFA_HUMAN
[Raw transfer]




FAD_C_3(1EFV)
ETFA_HUMAN
[Raw transfer]




FAD_A_3(2A1U)
ETFA_HUMAN
[Raw transfer]




FAD_C_7(1EFP)
ETFA_PARDE
[Raw transfer]




FAD_A_5(1EFP)
ETFA_PARDE
[Raw transfer]




FAD_D_4(3CLS)
ETFA_METME
[Raw transfer]




FAD_A_5(1EFP)
ETFA_PARDE
[Raw transfer]




FAD_D_5(3CLR)
ETFA_METME
[Raw transfer]




FAD_D_4(3CLT)
ETFA_METME
[Raw transfer]




FAD_D_4(3CLU)
ETFA_METME
[Raw transfer]




FAD_D_4(1O97)
ETFA_METME
[Raw transfer]




FAD_D_4(1O97)
ETFA_METME
[Raw transfer]




FAD_A_3(4KPU)
?
[Raw transfer]




FAD_A_3(4L2I)
?
[Raw transfer]




FMT_A_8(3IH5)
?
[Raw transfer]




4 PsiBlast_PDB 98.6663%-122 - C3 -2A1U 12.1 ETFA_HUMAN
47 Fugue 97.5062%-119 - C3 -1EFV 12.8 ETFA_HUMAN
1 PsiBlast_PDB 97.2063%-120 - C3 -1EFV 12.8 ETFA_HUMAN
25 HHSearch 95.8561%-112 - C3 -1EFV 12.8 ETFA_HUMAN
3 PsiBlast_PDB 95.7763%-128 - C3 -2A1T - ETFA_HUMAN -
26 HHSearch 89.5563%-108 - C3 -1EFP 12.4 ETFA_PARDE
5 PsiBlast_PDB 88.2861%-111 - C3 -1EFP 12.3 ETFA_PARDE
21 PsiBlast_CBE 87.8661%-110 - C3 -1EFP 12.2 ETFA_PARDE
12 PsiBlast_PDB 75.8432%-111 - C3 -3CLU 11.9 ETFA_METME
14 PsiBlast_PDB 75.7332%-112 - C3 -3CLS 12.0 ETFA_METME
13 PsiBlast_PDB 75.6632%-111 - C3 -3CLT 12.3 ETFA_METME
15 PsiBlast_PDB 74.8332%-112 - C3 -3CLR 12.0 ETFA_METME
11 PsiBlast_PDB 73.9632%-113 - C3 -1O97 12.5 ETFA_METME
22 PsiBlast_CBE 73.6432%-111 - C3 -1O96 - ETFA_METME -
10 PsiBlast_PDB 73.2532%-113 - C3 -1O96 - ETFA_METME -
24 PsiBlast_CBE 72.6232%-111 - C3 -1O96 - ETFA_METME -
23 PsiBlast_CBE 72.6132%-112 - C3 -1O96 - ETFA_METME -
2 PsiBlast_PDB 72.1563%-121 - C3 -1T9G - ETFA_HUMAN -
27 HHSearch 71.8631%-104 - C3 -1O97 12.5 ETFA_METME
7 PsiBlast_PDB 68.4335% -95 - C3 -4L2I 12.1 ?
6 PsiBlast_PDB 67.7135% -95 - C3 -4KPU 12.2 ?