@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA3375: (2016-02-16 )
MNNLIEVRDLSKTFTLHQQQGVVLNVLRGLNFNVAGGECLVLHGRSGAGKSTLLRTLYGNYLPAGGSIRLRHAGDWLELVGAEPREVLAVRRQTLGYVSQFLRVIPRVATLDVVMEPALARGWSRDSAELRARSLLARLNIPERLWQLAPGTFSGGEQQRVNIARGFMVEWPILLLDEPTASLDEANRQVVLELIGEAKAAGAALIGIFHDRAAREAVASRYLDMSQELSRQEQAHVV

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_J_5(3C41)
?
[Raw transfer]



ATP_J_5(4YMU)
?
[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ADP_B_6(2Q0H)
?
[Raw transfer]



ADP_A_5(2OLJ)
?
[Raw transfer]



ADP_B_6(2OLJ)
?
[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]



ADP_A_5(2OLJ)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



AT4_A_5(2OLK)
?
[Raw transfer]



AT4_C_7(2OLK)
?
[Raw transfer]



ATP_C_3(1VCI)
?
[Raw transfer]
63 Fugue 89.7027%-112 - C1 -3TUZ - METN_ECOLI -
36 PsiBlast_CBE 89.0031%-109 - C1 -1B0U 6.1 HISP_SALTY
79 HHSearch 88.7432%-100 - C1 -2PCJ - LOLD_AQUAE -
1 PsiBlast_PDB 86.7934%-106 - C1 -2PCJ - LOLD_AQUAE -
2 PsiBlast_PDB 86.7534%-108 - C1 -2PCL - LOLD_AQUAE -
83 HHSearch 86.2131%-102 - C1 -1B0U 6.2 HISP_SALTY
15 PsiBlast_PDB 81.6428%-114 - C1 -4YMT - ? -
25 PsiBlast_CBE 80.7731%-106 - C1 -3C4J 5.0 ?
7 PsiBlast_PDB 80.6731%-113 - C1 -2OUK - ? -
68 Fugue 80.1926% -96 - C1 -1Z47 - ? -
16 PsiBlast_PDB 80.1628%-112 - C1 -4YMU 6.8 ?
6 PsiBlast_PDB 79.5631%-104 - C1 -2OLK 6.1 ?
76 HHSearch 79.4631%-106 - C1 -2YYZ - ? -
14 PsiBlast_PDB 79.2428%-109 - C1 -4YMS - ? -
11 PsiBlast_PDB 78.8831%-111 - C1 -3C41 6.4 ?
18 PsiBlast_PDB 78.7228%-111 - C1 -4YMW - ? -
23 PsiBlast_CBE 78.6632%-104 - C1 -4U02 - ? -
28 PsiBlast_CBE 78.5231%-104 - C1 -2OUK - ? -
17 PsiBlast_PDB 78.4828%-110 - C1 -4YMV - ? -
3 PsiBlast_PDB 78.3132%-104 - C1 -4U00 6.1 ?
34 PsiBlast_CBE 78.1531%-107 - C1 -3C41 6.0 ?
32 PsiBlast_CBE 78.1031%-104 - C1 -2OLK 6.2 ?
5 PsiBlast_PDB 77.9631%-104 - C1 -2OLJ 5.9 ?
31 PsiBlast_CBE 77.8131%-103 - C1 -2OLK 6.2 ?
9 PsiBlast_PDB 77.6531%-102 - C1 -3C4J 6.6 ?
8 PsiBlast_PDB 77.5331%-106 - C1 -2Q0H 5.5 ?
30 PsiBlast_CBE 77.3031%-101 - C1 -2OLK 6.2 ?
86 HHSearch 76.4532% -95 * C1 *2OLJ 6.1 ?
33 PsiBlast_CBE 75.5131% -99 - C1 -2OLJ 5.9 ?
26 PsiBlast_CBE 74.9431%-104 - C1 -2Q0H 6.0 ?
37 PsiBlast_CBE 38.5734%-107 - C1 -1VCI 4.0 ?