@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA3384: (2016-02-16 )
MSAVIRVDSLNKTFARKQALFNLRLEIQAGEMVALIGASGSGKSTLLRHVAGLARCDRDNGGSIDVLGRRLQASGRLSGEVRRLRADIGYIFQQFNLVNRLSVLDNVLLGFLGRMPRWRGSLGLFSAEQKRQALEALARVGLADFAGQRASTLSGGQQQRVAIARALTQKAEVILADEPIASLDPESARKVMDILADINRHDGKTVVVTLHQVDYALRYCPRAVALKGGRILFDGSSEYLSEGFLNELYGAEGDTPLLFSDRARRGAESQPELTLARA

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_J_5(3C41)
?
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ADP_B_9(4HLU)
ECFA2_THEMA
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ADP_A_3(1F3O)
Y796_METJA
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




ADP_A_5(4HLU)
ECFA2_THEMA
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




ANP_A_6(4ZIR)
ECFA2_THEMA
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




EDO_A_12(2PCL)
LOLD_AQUAE
[Raw transfer]




58 Fugue 91.8235%-110 - C1 -3TUZ - METN_ECOLI -
29 PsiBlast_CBE 84.6937%-112 - C1 -3TUI - METN_ECOLI -
8 PsiBlast_PDB 84.6237%-114 - C1 -3TUZ - METN_ECOLI -
10 PsiBlast_PDB 84.4835%-124 - C1 -2OLJ 6.7 ?
73 HHSearch 84.1638%-112 - C1 -3TUI - METN_ECOLI -
12 PsiBlast_PDB 84.1135%-121 - C1 -2OUK - ? -
31 PsiBlast_CBE 83.8437%-110 - C1 -3TUI - METN_ECOLI -
7 PsiBlast_PDB 83.5937%-109 - C1 -3TUI - METN_ECOLI -
37 PsiBlast_CBE 83.4035%-117 - C1 -2OLK 5.9 ?
32 PsiBlast_CBE 83.4035%-121 - C1 -3C4J 5.3 ?
39 PsiBlast_CBE 83.3735%-116 - C1 -2OLK 5.8 ?
27 PsiBlast_CBE 83.1537%-111 - C1 -3TUZ - METN_ECOLI -
35 PsiBlast_CBE 82.9135%-118 - C1 -2OUK - ? -
13 PsiBlast_PDB 82.7935%-117 - C1 -2Q0H 5.4 ?
38 PsiBlast_CBE 82.7535%-114 - C1 -2OLK 6.0 ?
26 PsiBlast_CBE 82.6937%-112 - C1 -3TUZ - METN_ECOLI -
11 PsiBlast_PDB 82.4835%-114 - C1 -2OLK 5.8 ?
2 PsiBlast_PDB 82.1339%-108 - C1 -4U02 - ? -
25 PsiBlast_CBE 81.6637%-122 - C1 -3TIF 6.4 Y796_METJA
30 PsiBlast_CBE 81.5437%-107 - C1 -3TUI - METN_ECOLI -
14 PsiBlast_PDB 81.3535%-114 - C1 -3C4J 6.5 ?
24 PsiBlast_CBE 81.2538%-119 - C1 -1L2T 7.0 Y796_METJA
15 PsiBlast_PDB 81.1235%-115 - C1 -3C41 6.9 ?
41 PsiBlast_CBE 80.9535%-116 - C1 -3C41 6.5 ?
1 PsiBlast_PDB 80.7539%-111 - C1 -4U00 5.9 ?
40 PsiBlast_CBE 80.6035%-112 - C1 -2OLJ 5.8 ?
5 PsiBlast_PDB 80.2138%-109 - C1 -1F3O 6.3 Y796_METJA
4 PsiBlast_PDB 79.3837%-112 - C1 -3TIF 6.1 Y796_METJA
3 PsiBlast_PDB 78.9338%-115 - C1 -1L2T 6.4 Y796_METJA
43 PsiBlast_CBE 78.7834%-121 - C1 -4YMU 5.8 ?
33 PsiBlast_CBE 78.7735%-115 - C1 -2Q0H 5.7 ?
87 HHSearch 77.9436%-113 - C1 -1B0U 5.9 HISP_SALTY
82 HHSearch 77.7637%-117 * C1 *2OLJ 6.7 ?
42 PsiBlast_CBE 77.1634%-120 - C1 -4YMV 5.1 ?
18 PsiBlast_PDB 76.5834%-121 - C1 -4YMU 6.2 ?
19 PsiBlast_PDB 76.4234%-119 - C1 -4YMV 5.5 ?
56 PsiBlast_CBE 74.9331%-121 - C1 -4HLU 5.4 ECFA2_THEMA
55 PsiBlast_CBE 74.1231%-121 - C1 -4HLU 6.1 ECFA2_THEMA
46 PsiBlast_CBE 71.3734%-107 - C1 -1B0U 5.8 HISP_SALTY
57 PsiBlast_CBE 67.4031%-116 - C1 -4ZIR 5.7 ECFA2_THEMA
44 PsiBlast_CBE 66.6832%-112 - C1 -2PCL 2.8 LOLD_AQUAE