@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA3692: (2016-02-20 )
MRKYIALPAVSLLALALAACSTPPNANLEQARSNFSALQSQPDATKVAALETKDAGDWLAKADKAYQDGEDQRDVDQLAYLTNQRIELAKQTIVLRNAEAQLQNASAQRAQARLDARTAQLDKLRSQLNAKQTSRGTMVTFGDVLFDLDKSDLKPGAMRNIQQLAEFLQQNPERQVIVEGYTDSTGSANYNQRLSERRADSVRMALLSRGISPERVATRGYGKEYPVASNGTSSGRAMNRRVEVTISNDAKPVAPRSSVSG

Atome Classification :

(57 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GLY_D_12(3TD3)
OMP38_ACIBA
[Raw transfer]



GLY_G_15(3TD3)
OMP38_ACIBA
[Raw transfer]



DAL_C_13(4G4Z)
OMP38_ACIBA
[Raw transfer]



ALA_D_15(4G4Y)
OMP38_ACIBA
[Raw transfer]



GLY_C_11(3TD3)
OMP38_ACIBA
[Raw transfer]



ALA_B_11(4G4Y)
OMP38_ACIBA
[Raw transfer]



GLY_F_14(3TD3)
OMP38_ACIBA
[Raw transfer]



GLY_H_16(3TD3)

[Raw transfer]



GLY_A_9(3TD3)
OMP38_ACIBA
[Raw transfer]



GLY_E_13(3TD3)
OMP38_ACIBA
[Raw transfer]



ALA_G_21(4G4Y)
OMP38_ACIBA
[Raw transfer]



ALA_A_9(4G4Y)
OMP38_ACIBA
[Raw transfer]



ALA_E_17(4G4Y)
OMP38_ACIBA
[Raw transfer]



API_D_12(3TD4)
OMP38_ACIBA
[Raw transfer]



ALA_F_19(4G4Y)
OMP38_ACIBA
[Raw transfer]



API_C_11(3TD4)
OMP38_ACIBA
[Raw transfer]



ALA_C_13(4G4Y)
OMP38_ACIBA
[Raw transfer]



ALA_H_23(4G4Y)

[Raw transfer]



DAL_D_15(4G4Z)
OMP38_ACIBA
[Raw transfer]



API_D_12(4G88)
OMP38_ACIBA
[Raw transfer]



ALA_A_2(4G4W)
?
[Raw transfer]



API_H_18(4G88)

[Raw transfer]



GLY_B_10(3TD3)
OMP38_ACIBA
[Raw transfer]



API_E_13(3TD4)
OMP38_ACIBA
[Raw transfer]



API_B_10(3TD4)
OMP38_ACIBA
[Raw transfer]



API_A_9(3TD4)
OMP38_ACIBA
[Raw transfer]



DAL_A_2(4G4X)
?
[Raw transfer]



DAL_G_21(4G4Z)
OMP38_ACIBA
[Raw transfer]



DAL_E_17(4G4Z)
OMP38_ACIBA
[Raw transfer]



API_E_14(4G88)
OMP38_ACIBA
[Raw transfer]



DAL_F_19(4G4Z)
OMP38_ACIBA
[Raw transfer]



DAL_H_23(4G4Z)

[Raw transfer]



API_B_10(4G88)
OMP38_ACIBA
[Raw transfer]



DAL_B_11(4G4Z)
OMP38_ACIBA
[Raw transfer]



API_G_16(4G88)
OMP38_ACIBA
[Raw transfer]



API_F_14(3TD4)
OMP38_ACIBA
[Raw transfer]



DAL_A_9(4G4Z)
OMP38_ACIBA
[Raw transfer]



API_F_15(4G88)
OMP38_ACIBA
[Raw transfer]



API_G_15(3TD4)
OMP38_ACIBA
[Raw transfer]



API_A_9(4G88)
OMP38_ACIBA
[Raw transfer]



API_H_16(3TD4)

[Raw transfer]



API_C_11(4G88)
OMP38_ACIBA
[Raw transfer]



API_A_2(4G4V)
?
[Raw transfer]



GOL_A_2(3LDT)
?
[Raw transfer]



CHAIN_N_14(3TD5)
OMP38_ACIBA
[Raw transfer]
-
CHAIN_O_15(3TD5)
OMP38_ACIBA
[Raw transfer]
-
CHAIN_M_13(3TD5)
OMP38_ACIBA
[Raw transfer]
-
CHAIN_P_16(3TD5)

[Raw transfer]
-
CHAIN_J_10(3TD5)
OMP38_ACIBA
[Raw transfer]
-
CHAIN_L_12(3TD5)
OMP38_ACIBA
[Raw transfer]
-
CHAIN_K_11(3TD5)
OMP38_ACIBA
[Raw transfer]
-
CHAIN_I_9(3TD5)
OMP38_ACIBA
[Raw transfer]
-
2 PsiBlast_PDB 96.7539% -53 - C7 -2LBT - ARFA_MYCTU -
3 PsiBlast_PDB 96.3538% -54 - C7 -2KGW - ARFA_MYCTU -
5 PsiBlast_PDB 94.6338% -59 - C7 -2LCA - ARFA_MYCTU -
98 HHSearch 94.0240% -47 - C7 -2K1S - YIAD_ECOLI -
69 PsiBlast_CBE 93.8138% -53 - C7 -4RHA - ? -
49 PsiBlast_CBE 93.7641% -50 - C7 -3TD4 2.6
19 PsiBlast_PDB 93.5438% -55 - C7 -4RHA - ? -
56 PsiBlast_CBE 93.3141% -49 - C7 -3TD3 2.6
35 PsiBlast_CBE 93.1541% -50 - C7 -4G4Y 3.1
53 PsiBlast_CBE 93.0841% -51 - C7 -3TD4 3.0 OMP38_ACIBA
28 PsiBlast_CBE 93.0341% -51 - C7 -4G4Z 2.9
60 PsiBlast_CBE 92.7941% -53 - C7 -3TD3 2.9 OMP38_ACIBA
21 PsiBlast_CBE 92.6441% -50 - C7 -4G88 3.2
42 PsiBlast_CBE 92.4641% -55 - C7 -3TD5 4.3
10 PsiBlast_PDB 92.3741% -53 - C7 -4G4Z 3.0 OMP38_ACIBA
47 PsiBlast_CBE 92.3341% -48 - C7 -3TD5 4.5 OMP38_ACIBA
52 PsiBlast_CBE 92.3141% -54 - C7 -3TD4 3.0 OMP38_ACIBA
45 PsiBlast_CBE 92.3141% -53 - C7 -3TD5 4.2 OMP38_ACIBA
55 PsiBlast_CBE 92.2441% -56 - C7 -3TD4 2.7 OMP38_ACIBA
25 PsiBlast_CBE 92.1241% -51 - C7 -4G88 3.6 OMP38_ACIBA
43 PsiBlast_CBE 91.9441% -45 - C7 -3TD5 4.1 OMP38_ACIBA
32 PsiBlast_CBE 91.8941% -52 - C7 -4G4Z 3.7 OMP38_ACIBA
22 PsiBlast_CBE 91.8441% -53 - C7 -4G88 2.8 OMP38_ACIBA
46 PsiBlast_CBE 91.7941% -52 - C7 -3TD5 4.3 OMP38_ACIBA
11 PsiBlast_PDB 91.7941% -47 - C7 -4G88 2.9 OMP38_ACIBA
39 PsiBlast_CBE 91.7641% -50 - C7 -4G4Y 3.1 OMP38_ACIBA
7 PsiBlast_PDB 91.6941% -55 - C7 -3TD4 3.0 OMP38_ACIBA
41 PsiBlast_CBE 91.4941% -56 - C7 -4G4Y 2.8 OMP38_ACIBA
40 PsiBlast_CBE 91.4341% -49 - C7 -4G4Y 2.8 OMP38_ACIBA
31 PsiBlast_CBE 91.4041% -51 - C7 -4G4Z 3.5 OMP38_ACIBA
29 PsiBlast_CBE 91.3541% -49 - C7 -4G4Z 3.4 OMP38_ACIBA
48 PsiBlast_CBE 91.3341% -46 - C7 -3TD5 5.1 OMP38_ACIBA
50 PsiBlast_CBE 91.3041% -54 - C7 -3TD4 2.8 OMP38_ACIBA
54 PsiBlast_CBE 91.2641% -50 - C7 -3TD4 3.6 OMP38_ACIBA
24 PsiBlast_CBE 91.1941% -48 - C7 -4G88 2.5 OMP38_ACIBA
8 PsiBlast_PDB 91.1641% -51 - C7 -3TD5 5.0 OMP38_ACIBA
58 PsiBlast_CBE 91.1441% -56 - C7 -3TD3 2.7 OMP38_ACIBA
33 PsiBlast_CBE 91.0641% -53 - C7 -4G4Z 2.8 OMP38_ACIBA
6 PsiBlast_PDB 91.0641% -50 - C7 -3TD3 3.4 OMP38_ACIBA
57 PsiBlast_CBE 91.0041% -54 - C7 -3TD3 2.6 OMP38_ACIBA
27 PsiBlast_CBE 90.8941% -53 - C7 -4G88 2.5 OMP38_ACIBA
23 PsiBlast_CBE 90.8941% -52 - C7 -4G88 2.6 OMP38_ACIBA
44 PsiBlast_CBE 90.8541% -48 - C7 -3TD5 5.4 OMP38_ACIBA
59 PsiBlast_CBE 90.6941% -47 - C7 -3TD3 3.0 OMP38_ACIBA
37 PsiBlast_CBE 90.6941% -53 - C7 -4G4Y 2.9 OMP38_ACIBA
51 PsiBlast_CBE 90.5641% -56 - C7 -3TD4 3.1 OMP38_ACIBA
61 PsiBlast_CBE 90.5041% -48 - C7 -3TD3 2.5 OMP38_ACIBA
62 PsiBlast_CBE 90.4541% -51 - C7 -3TD3 2.7 OMP38_ACIBA
34 PsiBlast_CBE 90.4441% -55 - C7 -4G4Z 5.0 OMP38_ACIBA
26 PsiBlast_CBE 90.2741% -51 - C7 -4G88 3.1 OMP38_ACIBA
38 PsiBlast_CBE 90.1441% -47 - C7 -4G4Y 3.5 OMP38_ACIBA
9 PsiBlast_PDB 89.7741% -52 - C7 -4G4Y 3.4 OMP38_ACIBA
36 PsiBlast_CBE 89.7241% -53 - C7 -4G4Y 2.8 OMP38_ACIBA
30 PsiBlast_CBE 89.6041% -53 - C7 -4G4Z 2.8 OMP38_ACIBA
15 PsiBlast_PDB 85.0139% -37 - C7 -4G4V 3.6 ?
17 PsiBlast_PDB 84.9639% -35 - C7 -4G4X 3.2 ?
16 PsiBlast_PDB 82.5939% -34 - C7 -4G4W 3.2 ?