@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : BF0072_113540T0_kcl73: (2019-03-28 )
PEHCFVRILKYEIPIHGDGYLVGSDVNWWVGNQKVDFHINNDCTIQRRGGTQEKK
Atome Classification :
(20 SA)
--------------------------------------------------------------------------------------------------------------------------------.......--..--10------.....-...-----------20.--.--....--..-30--------------.----.......---40--..-------..-...-..50--------....
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
--------------------------------------------------------------------------------------------------------------------------------PE
H
C
F
V
R
--
I
L
--
K
Y
------
E
I
P
IH-GD
G
-----------
Y
L
V--G--SD
V
N
--
W
W
-VG--------------N----
Q
K
V
D
F
H
I---N---N
D
-------
C
T
-
I
Q
R-RGGT--------QEKK
48
SP3
67.82
14%
1
- C12 -
0.19
1GL5
-
TEC_MOUSE
A:
[179-245]
-------------------------------------------------------------------------------------------------------------------------------G
S
E
I
--
V
V
--
A
M
Y-
D
F
QATEAH
D
L
R
L
E
R
G
Q
E
-----------
Y
I
I
--
L
--
E
K
N
D
LH
W
W
-
R
A
RDK-----------
Y
----
G
S
E
G
Y
I
P
---
S
---
N
Y
-------
V
T
-
G
K
K
-
S
N
N
L
--------
D
Q
Y
D
34
Fugue
66.74
27%
-
- C- -
-
4IL7
-
?
A:
[138-222]
----------------------------------------------------------------------------------------------------------------------------ENYL
I
Y
S
G
F
G
T
--
S
L
--
P
Q
------
T
Y
T
I
P
-
A
N
G
-----------
Y
L
I
--
I
--
S
I
T
N
--
T
S
-
T
G
--------------
N
I---
G
Q
I
T
L
T
I
---
G
---
S
--------
T
T
-
M
T
F
-
N
L
Q
T
--------
G
E
N
K
32
Fugue
65.61
22%
88
- C10 -
-
3SHS
-
?
A:
[2-304]
------------------------------------------------------------------------------------------------------------------------AFTVSIQS
N
K
R
C
F
L
A
GD
G
F
--
T
L
------
T
A
T
V
A
-
G
D
E
-----------
P
L
P
--
S
--
N
L
T
Y
--
T
W
-
T
K
--------------
D
----
D
Q
P
--
H
E
---
N
---
N
T
-------
A
T
-
L
T
V
-
A
D
A
T
--------
S
E
N
A
53
SP3
65.35
25%
-85
* C12 *
0.17
1GCQ
1
GRB2_HUMAN
A:
[2-57]
----------------------------------------------------------------------------------------------------------------------------------
S
T
Y
V
Q
--
A
L
F-
D
F
DPQEDG
E
L
G
F
R
R
G
D
F
-----------
I
H
V
--
M
DN
S
D
P
N
--
W
W
-
K
G
AC------------
H
----
G
Q
T
G
M
F
P
---
R
---
N
Y
-------
V
T
P
V
-------------------
18
HHSearch
64.97
33%
-92
- C9 -
-
5AIW
-
?
A:
[128-167]
-------------------------------------------------------------------------------------------------------------------------------------
I
K
--
I
L
--
A
Y
------
E
S
K
D
N
-
S
Q
Q
-----------
Y
L
V
--
T
--
A
P
I
H
--
Q
V
-
F
N
--------------
G
----
T
K
N
D
F
E
I
---
N
---
Q
L
-------
I
Q
-
I
-------------------
56
SP3
64.55
23%
75
- C10 -
-
1WAP
2
MTRB_BACSU
A:
[8-75]
-----------------------------------------------------------------------------------------------------------------------------------
D
F
V
V
--
I
K
--
A
V
------
E
D
G
V
N
-
V
I
G
-----------
L
T
R
--
G
--
T
D
T
K
--
F
H
-
H
S
EKLDKGEVIIAQFT
E
----
H
T
S
A
I
K
V
---
R
---
G
E
-------
A
L
-
I
Q
T
-
A
Y
G
E
MK------
S
E
K
K
49
SP3
64.28
27%
17
* C10 *
-
1SRZ
-
GABR1_RAT
A:
[92-159]
---------------------------------------------------------------------------------------------------------------------------------
E
A
E
F
V
R
--
I
C
SK
S
Y
------
L
T
L
E
N
-
G
K
V
-----------
F
L
T
--
G
--
G
D
L
P
---
A
-
L
D
--------------
G
----
A
R
V
E
F
R
C
---
D
---
P
D
FHLVGSS
R
S
-
V
C
S
-
Q
G
Q
W
--------
S
T
P
K
43
Fugue
61.16
23%
80
- C8 -
-
1JEI
-
EMD_HUMAN
A:
[1-53]
-------------------------------------------------------------------------------------------------------------------------DNYADLS
D
T
E
L
T
T
L
--
L
R
--
R
Y
------
N
I
P
----
H
G
-----------
P
V
V
--
G
--
S
T
R
R
--
L
Y
-
E
K
--------------
K
----------
I
---
F
---
E
Y
-------
E
T
-
Q
R
R
-
R
L
S
P
--------
P
S
S
S
41
Fugue
60.24
23%
89
- C9 -
-
3OPY
-
PFKA3_PICPA
I:
[5-351]
DSIIRDLERENVGPEFGEFLNTLQTDLNSEKPPIEQVKSQLETHFNLAHETQEFSRKNDNAPVDKLLTNYYNNYEVNVLEFVLQMGFSRDLSIPLNVWFVLDMISQLSTSKQDLPLDYYLVLNNSQTG
K
Y
S
D
F
V
R
--
Y
L
--
I
Y
------
E
A
V
G
A
-
E
I
H
-----------
L
A
N
--
R
--
G
P
I
R
--
G
N
-
V
G
AG------------
D
----
R
K
I
T
F
H
L
---
L
CK-
K
T
-------
A
R
-
M
I
L
-
V
G
D
D
--------
R
E
T
D
37
Fugue
60.16
18%
-178
- C8 -
-
4G2S
-
PRGH_SALTY
A:
[6-111]
--------------------------------------------------------------------------------------------------------------------------------
P
--
Y
I
V
R
--
L
L
-----------------
N
S
-----------
S
L
N
--
G
--
C
E
F
P
-----
L
L
--------------
T
----
G
R
T
L
F
V
V
---
G
---
Q
S
-------
D
A
-
L
T
A
-
S
G
Q
L
--------
P
D
I
P
54
SP3
58.95
23%
44
- C9 -
-
1DGS
-
DNLJ_THEFI
A:
[315-400]
--------------------------------------------------------------------------------------------------------------------------------
A
E
E
K
E
T
R
--
L
L
--
D
V
------
V
F
Q
V
G
-
R
T
G
RVTPVGVLEPV
F
I
E
--
G
--
S
E
V
S
--
R
V
T
L
H
--------------
N
ESYI
E
E
L
D
I
R
I
---
G
---
D
W
-------
V
L
-
V
H
K
-
A
G
G
V
IPEVLRVL
K
E
R
R
20
HHSearch
55.73
24%
-110
* C14 *
-
5SIC
-
SSI_STRAO
I:
[74-102]
--------------------------------------------------------------------------------------------------------------------------------------------------------
L
T
-
V
D
G
-----------
V
W
Q
--
G
--
K
R
V
S
--
Y
--------------------------
E
R
V
F
---
S
---
N
E
-------
C
E
-
M
N
A
-
H
G
S
-------------
15
HHSearch
53.97
24%
-101
- C14 -
-
3SIC
-
SSI_STRAO
I:
[74-102]
--------------------------------------------------------------------------------------------------------------------------------------------------------
L
T
-
V
D
G
-----------
V
W
Q
--
G
--
K
R
V
S
--
Y
--------------------------
E
R
V
F
---
S
---
N
E
-------
C
E
-
M
N
A
-
H
G
S
-------------
50
SP3
53.47
21%
62
- C12 -
0.09
1BF4
-
DN7D_SULAC
A:
[1-63]
--------------------------------------------------------------------------------------------------------------------------------------
A
--
T
V
--
K
F
------
K
--
Y
K
-
G
E
E
-----------
K
E
V
--
D
I-
S
K
I
K
KV
W
R
-
V
G
-------------------
K
M
I
S
F
T
Y
---
D
---
E
G
-------
G
G
-
K
T
G
-
R
G
A
V
--------
S
E
K
D
52
SP3
53.40
12%
-42
- C12 -
-
1FMK
-
?
?:
[82-159]
---------------------------------------------------------------------------------------------------------------------------------
M
V
T
T
F
V
--
A
L
Y-
D
Y
ESRTET
D
L
S
F
K
K
G
E
R
-----------
L
Q
I
VN
N
--
T
E
G
D
--
W
W
-
L
A
HSLS----------
T
----
G
Q
T
G
Y
I
P
---
S
---
N
---------
Y
-
V
A
P
-
S
D
S
I
--------
Q
A
--
44
Fugue
51.38
16%
-81
- C8 -
-
4EYT
-
?
A:
[10-106]
--------------------------------------------------------------------------------------------------------------------------------
K
Q
N
C
L
I
K
--
I
I
--
N
--------
I
P
Q
G
-
T
---------------
L
--
K
--
A
E
V
V
--
L
A
-
V
R
--------------
H
----
L
G
Y
E
F
Y
C
---
D
YID
G
Q
-------
A
M
-
I
R
F
-
Q
N
S
D
--------
E
Q
R
L
40
Fugue
51.13
19%
37
- C11 -
-
1AXH
-
TO1A_HADVE
A:
[1-37]
--------------------------------------------------------------------------------------------------------------------------------
S
P
T
C
I
P
S
-------------------------------------------------------------------
G
----
Q
P
C
P
Y
N
E
NCC
S
---
Q
S
-------
C
T
-
F
K
E
N
E
N
G
N
--------
T
V
K
R
16
HHSearch
50.60
29%
-40
- C14 -
-
4HWX
-
?
A:
[80-107]
---------------------------------------------------------------------------------------------------------------------------------------------------------
T
-
A
D
G
-----------
V
L
N
--
G
--
R
R
V
A
--
W
--------------------------
K
H
T
F
---
S
---
N
T
-------
C
V
-
M
S
A
-
N
L
N
-------------
47
SP3
48.13
14%
-15
- C9 -
-
1E8Q
-
?
A:
[1-46]
---------------------------------------------------------------------------------------------------------------------------------
A
S
C
W
A
Q
--
S
Q
--
G
Y
------
N
C
C
N
N
-
P
S
S
TKV--------
E
Y
T
--
D
--
A
S
G
Q
--
W
G
-
V
Q
--------------
N
--------------
G
---
Q
W
-------
C
G
-
I
D
Y
-
S
Y
G
Q
------------
5
PsiBlast_PDB
45.99
42%
-42
- C8 -
-
3PJI
-
?
A:
[39-79]
----------------------------------------------------------------------------------------------------------------------------------
H
C
F
V
R
--
C
I
--
G
L
------
E
L
N
L
Y
-
D
D
K
-----------
Y
G
V
--
D
--
L
Q
A
N
--
W
---------------------------------------------------------------------
User Run . : Multi Template Modeling Result:
(2 SA)
.........10........20........30........40........50....
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
PE
H
C
F
V
R
I
L
K
Y
E
I
P
IHGD
G
Y
L
VGSD
V
N
W
W
VGN
Q
K
V
D
F
H
INN
D
C
T
I
Q
RRGGTQEKK
58
100.00
100%
0
- C- -
M058
-
A:
[1-55]
P
E
H
C
F
V
R
I
L
K
Y
E
I
P
I
H
G
D
G
Y
L
V
G
S
D
V
N
W
W
V
G
N
Q
K
V
D
F
H
I
N
N
D
C
T
I
Q
R
R
G
G
T
Q
E
K
K
57
100.00
100%
0
- C- -
M057
-
A:
[1-55]
P
E
H
C
F
V
R
I
L
K
Y
E
I
P
I
H
G
D
G
Y
L
V
G
S
D
V
N
W
W
V
G
N
Q
K
V
D
F
H
I
N
N
D
C
T
I
Q
R
R
G
G
T
Q
E
K
K