@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : BR29_026940T0_kcl88: (2019-03-28 )
GECIVKLHDPNGKVVSWFIALAGKREVKKEAAFSWSCSTNSETCEAEIPLCIVPKNFKPVGEH
Atome Classification :
(20 SA)
----------------------------------.....-..-.-.10---.....------..--------..-------20.-.-----..------....30-.-------------.---------------------...---...-----40.----.....---..50--.--....-...---60-..
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
----------------------------------G
E
C
I
V
-
K
L
-H-DP----NG
K
V
V
------
S
W
--------
F
I
-------
A
LA-G-----
K
R
------
E
V
K
K
EA-
A
-------------
F
---------------------
S
W
S---CST-----NSE----TCEAE---I
P
L
C
--I--VPKN-FKP---VG-EH
27
SP3
82.09
28%
-19
- C10 -
-
1K8R
-
BYR2_SCHPO
B:
[1-95]
------------------------------------
C
I
L
-
R
F
-
I
-
A
C
----
N
G
Q
T
R
------
A
V
QSRGDYQK
T
L
-------
A
I
A
-
L
-----
K
K
------
F
S
L
E
D
A
-
S
-------------
K
---------------------
F
I
V
---
C
V
S
-----
Q
S
S
RIKL
I
T
E
E
R
---
D
R
L
I
--
I
--
V
P
K
E
--
K
P
---
C
P
-
S
F
48
Fugue
67.91
24%
-10
- C9 -
1QYS
-
?
A:
[3-94]
---------------------------------D
I
Q
V
Q
V
-
N
I
-
D
-
D
-----
N
G
K
N
F
------
D
Y
--------
T
Y
-------
T
V
T
-
T
-----
E
S
------
E
L
Q
K
V
L
-
N
ELMDYIKKQGAKR
V
---------------------
R
I
S
---
I
T
A
-----
R
T
K
----
K
-
E
A
E
---
K
F
A
A
--
I
--
L
I
K
V
-
F
A
E
---
L
G
-
Y
N
40
Fugue
67.27
26%
84
- C13 -
-
4R5O
3
?
A:
[2-427]
DDCEDLHLGNLAHYPNVLKGTFPTESQVLELGET
L
E
I
T
P
-
E
L
-
L
-
N
P
----
E
G
A
T
Y
------
S
W
--------
L
V
-----------
N
-----
G
K
------
E
Y
S
T
E
P
-
T
-------------
F
---------------------
S
Y
K
---
I
D
N
------------
P
C
R
A
D
---
L
S
-
C
--
I
--
I
K
N
K
-
Y
G
K
---
V
E
M
S
T
24
SP3
64.73
25%
74
- C9 -
0.22
1E2W
-
CYF_CHLRE
A:
[169-232]
-------------TIYNASAAGKIVAITALSEKK
G
G
F
E
V
-
S
I
-
E
-
K
A
----
N
G
E
V
V
------
V
D
--------
K
I
-------
P
-
A
-
G
-----
P
D
------
L
I
V
K
E
G
-----------------------------------------------------
Q
----
T
V
Q
A
D
---
Q
P
L
T
--
N
--
N
P
--------------
2
PsiBlast_PDB
60.19
29%
-21
- C15 -
-
2DWC
1
PURT_PYRHO
A:
[213-259]
-----------------------------------
E
L
A
V
-
R
H
-
F
-
D
E
----
N
G
E
I
V
------
T
T
--------
F
P
-------
K
P
V
-
G
-----
H
Y
------
Q
I
D
G
D
Y
-
H
-------------
A
---------------------
S
W
Q
---
P
A
E
-----
I
S
E
----
K
A
E
R
E
---
V
------------------------
1
PsiBlast_PDB
59.67
29%
-36
* C15 *
-
2CZG
2
PURT_PYRHO
A:
[213-259]
-----------------------------------
E
L
A
V
-
R
H
-
F
-
D
E
----
N
G
E
I
V
------
T
T
--------
F
P
-------
K
P
V
-
G
-----
H
Y
------
Q
I
D
G
D
Y
-
H
-------------
A
---------------------
S
W
Q
---
P
A
E
-----
I
S
E
----
K
A
E
R
E
---
V
------------------------
23
SP3
58.60
22%
101
- C6 -
-
1IHR
-
TONB_ECOLI
A:
[2-74]
-------------------------ARAQALRIE
G
Q
V
K
V
-
K
F
-
D
V
T
P
----
D
G
R
V
D
------
N
V
--------
Q
I
-------
L
S
A
K
P
-----
A
N
MFE---
R
E
V
K
N
A
-
M
-------------
R
---------------------
R
W
R
---
Y
E
P
-----
G
K
P
----
G
S
G
I
V
---
V
N
I
---------
L
-
F
K
I
---
N
G
-
T
T
32
SP3
57.90
9%
-65
- C9 -
0.35
1KRH
1
BENC_ACIAD
A:
[2-105]
----------------------------------
S
N
H
Q
V
-
A
L
-
Q
-
F
E
----
D
G
V
-
T
------
R
F
--------
I
C
-------
I
A
Q
-
G
-----
E
T
LS----
D
A
A
Y
R
Q
-
Q
-------------
I
---------------------
N
I
P
---
M
D
C
-----
R
E
G
----
E
C
G
T
C
-----
R
A
--
F
--
C
E
S
G
-
N
Y
D
---
M
P
-
E
D
42
Fugue
55.81
19%
-33
- C9 -
0.31
2JX5
-
?
A:
[1-69]
----------------------------------
M
L
V
I
V
-
R
L
-
Q
-
D
Q
----
T
L
P
F
E
------
L
P
--------
A
G
-------
A
R
A
-
S
-----
Q
L
------
S
N
L
L
S
S
S
G
-------------
M
---------------------
A
F
S
---
L
H
T
-----
Q
G
R
----
V
L
S
E
A
---
A
E
L
N
DK
M
--
V
I
D
A
-
F
V
P
---
A
D
-
G
A
43
Fugue
55.25
22%
15
- C9 -
0.39
2L2D
-
OTU7A_HUMAN
A:
[11-83]
---------------------------------S
A
E
C
W
A
A
L
L
-
H
-
D
P
MTLD
M
D
A
V
L
------
S
D
--------
F
V
-------
R
S
T
-
G
AEPGL
A
R
------
D
L
L
E
G
K
-
N
-------------
W
---------------------
D
L
T
---
A
A
L
-----
S
D
Y
----
E
Q
L
R
Q
---
V
H
T
A
--
N
--
L
P
H
V
-
F
N
E
----
G
-
R
G
41
Fugue
54.56
19%
17
- C9 -
0.25
5TDW
-
A:
[1-69]
--------------------------------GI
I
T
C
I
C
-
D
L
-
N
-
D
D
----
D
G
F
T
I
QCDHCN
R
W
--------
Q
H
-------
A
I
C
-
Y
-----
G
I
------
K
D
I
G
M
A
-
P
-------------
D
---------------------
D
Y
L
---
C
N
S
------
C
D
----
P
R
E
V
D
---
I
N
L
A
--
R
--
K
I
Q
Q
-
E
R
I
---
N
V
-
K
-
25
SP3
53.98
15%
46
- C9 -
0.45
1K8W
-
TRUB_ECOLI
A:
[22-86]
------------------------------MDIN
G
--
V
L
-
L
L
-
D
-
K
P
----
Q
G
M
--------
S
S
--------
N
D
-------
A
L
Q
-
K
-----
V
K
------
R
I
Y
N
A
N
-
R
-------------
A
---------------------
G
H
T
---
G
A
L
-----
D
P
L
----
A
-
T
G
M
---
L
P
I
C
--
L
GE
A
T
K
F
-
S
Q
Y
---
L
L
-
D
S
26
SP3
51.43
15%
-30
* C14 *
-
1DVB
-
RUBY_DESVH
A:
[148-191]
----------------------------------------------------------------------------------------------------
F
L
R
E
Q
-
A
-------------
T
---------------------
K
W
R
---
C
R
N
CGYVH
E
G
T
----
G
A
P
E
L
---
C
P
A
C
--
A
--
H
P
K
A
H
F
E
L
---
L
G
-
I
N
38
Fugue
48.07
11%
-1
- C9 -
0.21
2JZ5
-
?
A:
[1-91]
----------------------------------
A
G
E
I
G
-
F
I
-
I
-
K
E
----
G
D
E
V
A
------
D
V
--------
T
I
FAETKDA
L
E
S
-
E
-----
L
A
------
K
Y
I
E
L
A
-
K
-------------
S
VCAGVEYNVSELTEESKELTA
R
F
K
---
F
E
V
-----
S
A
E
----
K
L
I
F
E
---
L
K
T
R
--
S
--
L
A
R
L
-
E
H
H
---
H
H
-
H
H
31
SP3
47.61
14%
-45
- C9 -
-
1GPS
-
?
?:
[1-47]
----------------------------------
K
I
C
R
R
-
R
S
-
A
-
G
F
----
K
G
P
C
M
------
S
N
---------
K
-------
N
C
A
---------------
Q
V
C
Q
Q
E
-
G
-------------
W
G--------------------
G
G
N
---
C
D
G
-----
P
F
R
----
R
C
--------
K
C
--
I
--
R
Q
C
-------------
37
Fugue
47.23
26%
44
- C- -
-
4G7X
-
?
A:
[3-94]
-------INCDPNTTTSHQLLFGFGSPIVQSVLF
D
G
C
M
L
-
D
I
E
K
-
D
D
----
Y
G
F
V
W
------
S
C
--------
L
S
-------
N
E
N
-
G
-----
D
Y
C-----
K
G
L
Y
K
P
-
R
-------------
F
---------------------
T
Q
G
---
V
S
P
-----
N
W
P
----
M
C
D
L
S
GAS
A
E
R
C
--
I
--
Y
P
---
Y
C
P
---
E
G
-
E
-
44
Fugue
45.54
13%
22
- C9 -
0.26
2MXT
-
HNRPQ_HUMAN
A:
[1-85]
---------GSENFQTLLDAGLPQKVAEKLDEIY
V
A
G
L
V
-
A
H
-
S
-
D
L
----
D
E
R
A
I
------
E
A
--------
L
K
-------
E
F
--------
N
E
------
D
G
A
L
A
V
-
L
-------------
Q
---------------------
Q
F
K
---
D
S
D
-----
L
S
H
----
V
Q
N
K
S
---
A
F
L
C
--
G
--
V
M
K
T
-
Y
R
Q
---
R
E
-
K
-
29
SP3
45.45
15%
14
- C9 -
0.24
1C1Y
-
RAF1_HUMAN
B:
[1-77]
-----------------------------------
S
N
T
I
-
R
V
-
F
-
L
P
----
N
-
K
Q
R
------
T
V
--------
V
N
-------
V
R
N
-
G
-----
M
S
LHDCLM
K
A
L
K
V
R
-
G
-------------
L
---------------------
Q
P
E
C--
C
A
V
-----
F
R
L
----
L
H
E
H
K
---
G
K
K
A
--
R
--
L
D
W
N
-
T
D
A
ASL
I
G
-
E
E
34
Fugue
44.66
31%
83
* C10 *
-
2N9Z
-
DKTX_HAPSC
A:
[1-42]
--------------------------------------------------------------------------------------------
D
------
C
A
K
E
G
E
-
V
-------------
C
---------------------
S
W
G
KKC
C
D
L
-----
D
N
F
----
Y
C
P
M
E
F--
I
P
H
C
--
K
--
K
Y
K
P
-
Y
V
P
---
V
T
-
T
-
7
HHSearch
44.59
17%
-113
- C7 -
-
2MM0
-
?
A:
[1-37]
-----------------------------------
N
C
V
A
-
N
I
-
L
-
N
I
----
N
E
A
V
I
------
A
T
--------
G
C
-------
V
P
A
-
G
-----
G
E
------
L
R
I
F
V
G
S
S
-------------
H
---------------------
S
Y
L
---
I
-----------------------------------------------