@TOME V3
(Feb 2022)
Ref.
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : BR29_104230T0_kcl96: (2019-03-28 )
LKRVVICEVFIRMSGGLDLPIGKDFVPAGETTKIHAYTCETDTMCGAECDTPSNYRYSS
Atome Classification :
(20 SA)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------...--.....-.---------10.....------..--..20...--....---.30..-----...---------..---.40........50........
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L
K
R
--
V
V
I
C
E
-
V
---------
F
-
I
R
MSG------GL--DLPIGKD--FVPA---GE
T
T
K
-----
I
H
A
---------
Y
T---CETDTMCGAECDTPSNYRYSS
8
PsiBlast_PDB
85.80
30%
-279
* C10 *
0.36
3N44
-
?
F:
[359-408]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
T
I
R
E
-
A
---------
E
-
I
E
V
E
G
------
N
S
--
Q
L
Q
I
--
S
--
F
S
T
A
---
L
A
S
A
E
-----
F
R
V
---------
Q
V
---
C
S
T
Q
V
H
C
A
A
E
C
H
P
P
K
D
H
----
2
PsiBlast_PDB
83.90
30%
-270
- C10 -
0.26
3J2W
-
?
A:
[337-386]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
T
I
R
E
-
A
---------
E
-
I
E
V
E
G
------
N
S
--
Q
L
Q
I
--
S
--
F
S
T
A
---
L
A
S
A
E
-----
F
R
V
---------
Q
V
---
C
S
T
Q
V
H
C
A
A
E
C
H
P
P
K
D
H
----
3
PsiBlast_PDB
83.21
30%
-289
- C10 -
0.28
2XFC
-
?
A:
[337-386]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
T
I
R
E
-
A
---------
E
-
I
E
V
E
G
------
N
S
--
Q
L
Q
I
--
S
--
F
S
T
A
---
L
A
S
A
E
-----
F
R
V
---------
Q
V
---
C
S
T
Q
V
H
C
A
A
E
C
H
P
P
K
D
H
----
9
PsiBlast_PDB
82.55
30%
-270
- C10 -
0.27
5ANY
-
?
A:
[337-386]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
T
I
R
E
-
A
---------
E
-
I
E
V
E
G
------
N
S
--
Q
L
Q
I
--
S
--
F
S
T
A
---
L
A
S
A
E
-----
F
R
V
---------
Q
V
---
C
S
T
Q
V
H
C
A
A
E
C
H
P
P
K
D
H
----
4
PsiBlast_PDB
82.29
30%
-271
- C10 -
0.39
3N40
-
?
F:
[339-388]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
T
I
R
E
-
A
---------
E
-
I
E
V
E
G
------
N
S
--
Q
L
Q
I
--
S
--
F
S
T
A
---
L
A
S
A
E
-----
F
R
V
---------
Q
V
---
C
S
T
Q
V
H
C
A
A
E
C
H
P
P
K
D
H
----
7
PsiBlast_PDB
81.77
30%
-270
- C10 -
0.17
3N43
-
?
F:
[359-408]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
T
I
R
E
-
A
---------
E
-
I
E
V
E
G
------
N
S
--
Q
L
Q
I
--
S
--
F
S
T
A
---
L
A
S
A
E
-----
F
R
V
---------
Q
V
---
C
S
T
Q
V
H
C
A
A
E
C
H
P
P
K
D
H
----
6
PsiBlast_PDB
81.57
30%
-270
- C10 -
0.23
3N42
-
?
F:
[359-408]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
T
I
R
E
-
A
---------
E
-
I
E
V
E
G
------
N
S
--
Q
L
Q
I
--
S
--
F
S
T
A
---
L
A
S
A
E
-----
F
R
V
---------
Q
V
---
C
S
T
Q
V
H
C
A
A
E
C
H
P
P
K
D
H
----
1
PsiBlast_PDB
80.52
30%
-268
- C10 -
0.31
2XFB
-
?
A:
[337-386]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
T
I
R
E
-
A
---------
E
-
I
E
V
E
G
------
N
S
--
Q
L
Q
I
--
S
--
F
S
T
A
---
L
A
S
A
E
-----
F
R
V
---------
Q
V
---
C
S
T
Q
V
H
C
A
A
E
C
H
P
P
K
D
H
----
5
PsiBlast_PDB
76.31
30%
-282
- C10 -
0.24
3N41
-
?
F:
[359-403]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
T
I
R
E
-
A
---------
E
-
I
E
V
E
G
------
N
S
--
Q
L
Q
I
--
S
--
F
S
T
A
---
L
A
S
A
E
-----
F
R
V
---------
Q
V
---
C
S
T
Q
V
H
C
A
A
E
C
H
---------
37
HHSearch
63.77
31%
13
- C6 -
-
1ZU1
-
ZN346_XENLA
A:
[8-49]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
------
A
L
--
D
L
P
V
G
K
D
--
A
V
N
S
LIR
E
N
S
H
I
-----
F
S
D
---------
T
Q
---
C
K
---
V
C
S
A
V
L
I
S
E
S
Q
K
L
---
30
SP3
60.76
22%
-34
- C6 -
-
1EY3
2
ECHM_RAT
A:
[1-258]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITR
I
K
K
--
P
V
I
A
A
-
V
---------
N
G
Y
A
L
G
G
------
G
C
--
E
L
A
M
M
C
D
--
I
I
Y
A
---
G
E
K
A
Q
-----
F
G
Q
----------------
P
E
I
L
L
G
T
I
P
G
A
G
G
T
Q
R
L
T
R
14
Fugue
59.56
20%
-36
- C7 -
-
1D3C
-
CDGT2_BACCI
A:
[497-583]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
T
--
P
T
I
G
H
-
V
GPMMAKPGV
T
-
I
T
I
D
G
RGFGSS
K
G
--
T
V
Y
F
G
T
T
--
A
V
S
G
---
A
D
I
T
S
WEDTQ
I
K
V
KIPAVAGGN
Y
N
---
I
K
V
A
N
A
A
G
T
A
S
N
V
Y
D
N
F
E
V
L
S
33
SP3
58.63
20%
-43
* C9 *
-
1HV9
1
GLMU_ECOLI
A:
[252-452]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VMLRDPARFDLRGTLTHGRDVE
I
D
T
NV
I
I
E
G
N
-
V
---------
T
-
L
----------
G
H
--
R
V
K
I
G
T
G
CV
I
K
N
S
VI-
G
D
D
C
E
-----
I
S
P
---------
Y
T
---
V
V
E
D
A
N
L
A
A
A
C
T
I
G
P
F
A
R
L
R
P
26
SP3
57.49
18%
-12
- C9 -
-
1V3W
4
?
A:
[1-173]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAIYEINGKKPRIHPSAFVDENAVVIGDVVLEEKTSVWPSAVLRGDIEQIYV
G
K
Y
--
S
N
V
Q
D
N
V
---------
S
-
I
H
T
S
H
------
G
Y
--
P
T
E
I
G
E
Y
---
V
T
I
---
G
H
N
A
M
-----
V
H
G
---------
A
K
---
V
G
N
Y
V
I
I
G
I
S
S
V
I
L
D
G
A
K
I
G
D
28
SP3
56.08
20%
-15
- C9 -
-
1HV9
2
GLMU_ECOLI
A:
[4-452]
NAMSVVILAAGKGTRMYSDLPKVLHTLAGKAMVQHVIDAANELGAAHVHLVYGHGGDLLKQALKDDNLNWVLQAEQLGTGHAMQQAAPFFADDEDILMLYGDVPLISVETLQRLRDAKPQGGIGLLTVKLDDPTGYGRITRENGKVTGIVEHKDATDEQRQIQEINTGILIANGADMKRWLAKLTNNNAQGEYYITDIIALAYQEGREIVAVHPQRLSEVEGVNNRLQLSRLERVYQSEQAEKLLLAGVMLRDPARFDLRGTLTHGRDVE
I
D
T
--
N
V
I
I
E
-
G
---------
N
-
V
T
L
G
H
------
R
V
--
K
I
G
T
G
C
V
--
I
K
N
S
VI-
G
D
D
C
E
-----
I
S
P
---------
Y
T
---
V
V
E
D
A
N
L
A
A
A
C
T
I
G
P
F
A
R
L
R
P
35
SP3
55.35
16%
-39
- C6 -
-
1D3G
4
PYRD_HUMAN
A:
[1-367]
---------------------------------------------------------------MATGDERFYAEHLMPTLQGLLDPESAHRLAVRFTSLGLLPFQDSDMLEVRVLGHKFRNPVGIAAGFDKHGEAVDGLYKMGFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSVVEHRLRARQQKQAKLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLGKAELRRLLTKVLQERDG
L
R
R
--
V
H
R
P
A
-
V
---------
L
-
V
K
I
A
P
------
D
L
--
T
S
Q
D
K
E
D
--
I
A
S
V
---
V
K
E
L
G
-----
I
D
G
---------
L
I
---
V
-
T
N
T
T
V
S
R
P
A
G
L
Q
G
A
L
R
S
E
T
16
Fugue
54.95
22%
-36
- C6 -
-
4JY3
7
?
A:
[10-379]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKSVSKETFNGLPWRI
M
T
R
--
S
H
L
H
D
-
A
---------
L
-
V
N
R
A
R
AL----
G
V
--
D
I
S
V
N
S
E
--
A
V
A
A
---
D
P
V
G
R
-----
L
T
L
---------
Q
T
GEV
L
E
A
D
L
I
V
G
A
-
D
G
V
G
S
K
V
R
D
S
I
19
Fugue
54.33
19%
-78
- C6 -
-
1IW4
-
ITRP_HALRO
A:
[1-55]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
--
H
M
D
C
T
-
E
---------
F
-
N
P
L
C
R
------
C
N
--
K
M
L
G
D
L
I
--
C
A
V
I
---
G
D
A
K
E
-----
E
H
R
------------------
N
M
C
A
L
C
C
E
H
P
G
G
F
E
Y
S
N
12
Fugue
54.08
22%
-36
- C6 -
-
4H2Q
7
?
A:
[10-379]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKSVSKETFNGLPWRI
M
T
R
--
S
H
L
H
D
-
A
---------
L
-
V
N
R
A
R
------
A
L
GV
D
I
S
V
N
S
E
--
A
V
A
A
---
D
P
V
G
R
-----
L
T
L
---------
Q
T
GEV
L
E
A
D
L
I
V
G
A
-
D
G
V
G
S
K
V
R
D
S
I
27
SP3
51.30
15%
39
- C6 -
-
1O8U
-
CAMK_RHOSO
A:
[4-252]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------LATPFQEYSQKYENIRLERDGGVLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNLGTPHDWDEIIFEGQRLLNNLLS
I
E
V
--
P
V
I
A
A
-
V
---------
N
-
G
P
V
T
N
------
H
P
--
E
I
P
V
M
S
D
--
I
V
L
A
---
A
E
S
A
T
-----
F
Q
D
---------
G
P
---
H
---
F
P
S
G
I
V
P
G
D
G
A
H
V
V
W
P
H