@TOME V2.3
(Mar 2018)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : M_BR29_EuGene_00000401: (2018-03-20 )
EWCTVTVFYQGRTSGYPLPTAKKVGIVQSFPGEGKGYADYQYILDENCDWKEHGRPWLTGMRLETVPFVAKQKYE
Atome Classification :
(20 SA)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10----...-------------.-----...---.20---.-------..------.--.....30------....---------.--------....-------40---....-..-----..-----50----..---------..-.---..---.----------.60---......-.----.70....
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------E
W
C
T
V
T
V
F
Y
QG----RTS-------------G-----YPL---PT----A-------KK------V--
G
I
VQSF-------PGEG---------K--------GY
A
D
-------
Y
Q
---
Y
I
LD-EN-----C
D
-----
W
-----
K
E---------HG-R---PW---L----------TGM---
R
L
ETVP-F----VAKQKYE
21
SP3
68.74
21%
62
- C5 -
-
1GXT
1
HYPF_ECOLI
A:
[4-91]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------N
T
S
C
G
V
Q
L
R
I
R
G
----
K
V
Q
-------------
G
-----
V
G
F
R--
P
F
VWQL
A
-------
Q
Q
------
L
--
N
L
H
G
D
V
-------
C
N
D
G
---------
D
--------
G
----------
V
E
---
V
R
L
R
-
E
D
-----
P
E
VFLVQ
L
-----
Y
Q
---------
H
C
-
P
---
P
L
---
A
----------
R
I
D
---
S
V
E
R
E
P
-
F
----
I
W
S
Q
L
P
T
22
SP3
60.47
17%
72
- C5 -
-
2ACY
-
?
?:
[1-98]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AEGD
T
L
I
S
V
D
Y
E
I
F
G
----
K
V
Q
-------------
G
-----
V
F
F
R--
K
Y
TQAE
G
-------
K
K
------
L
--
G
L
V
G
W
V
-------
Q
N
T
D
---------
Q
--------
G
T
V
Q
-------
G
Q
---
L
Q
G
P
A
S
K
-----
V
R
HMQEW
L
-----
E
T
---------
K
G
-
S
---
P
K
SH-
I
----------
D
R
A
---
S
F
H
N
E
K
-
V
----
I
V
K
L
D
Y
T
15
Fugue
59.77
17%
1
- C5 -
-
4FHL
9
YEKI_SCHPO
A:
[2-392]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSMTLSSNQYQLPLNVRPYTTTWCSQSPSCSNLLAIGHDTGITIYCASEESTGLTLQELFTIQTGLPTLHLSFSSSCSYSENSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLTELVKNPWLLTLNTLPLVNSSLANVRWIGSDGSGIL
A
M
C
K
S
G
A
W
L
R
W
----
N
L
F
-------------
K
-----
N
L
L
---
P
N
----
V
-------
Q
G
------
I
--
S
L
F
P
S
L
-------
L
G
A
C
---------
P
HP------
R
Y
M
D
-------
Y
F
---
A
T
A
H
-
S
--------------------
Q
---------
H
G
-
L
---
I
Q
---
L
----------
I
N
T
YEK
D
S
N
S
I
P
-
I
----
Q
L
G
M
P
I
V
26
SP3
58.73
14%
22
- C5 -
-
1URR
1
ACYP2_DROME
A:
[6-102]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VAK
Q
I
F
A
L
D
F
E
I
F
G
----
R
V
Q
-------------
G
VFFRK
H
T
S
---
H
E
----
A
-------
K
R
------
L
--
G
V
R
G
W
C
-------
M
N
T
R
---------
D
--------
G
T
V
K
-------
G
Q
---
L
E
A
P
-
M
M
NLMEM
K
H
-----
W
-----
L
E
---------
N
N
-
R
---
I
P
NAK
V
----------
S
K
A
---
E
F
S
Q
I
Q
-
E
----
I
E
D
Y
T
F
T
17
Fugue
58.10
19%
-64
- C6 -
-
2JX5
-
?
A:
[1-69]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
L
V
I
V
R
L
Q
D
----
Q
T
L
-------------
P
-----
F
E
L
---
P
A
GAR-
A
-------
S
Q
------
L
--
S
N
L
L
S
S
-------
S
G
M
A
---------
F
--------
S
L
H
T
-------
Q
G
---
R
V
L
S
-
E
A
--------------------------------
A
---
E
L
---
N
----------
D
K
M
---
V
I
D
A
F
V
-
P
----
A
D
G
A
G
L
E
16
Fugue
56.04
33%
-34
- C2 -
-
3WL8
2
OPH_PSESP
A:
[23-358]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VKWECPAGYEVKEGLNVDFPHKGMKRAFIVYPAKNVSGPAPVWVPMTGSVESTNDNLTVARSGANSILADHGYTVIAPVRACANQDPNIRGERCNGPGSNGWNWNPWFEGRAADPSGEHWKNDEGPDSSFFVAMVQCVGTKYKLDARRLFLGGIASGGTMTNRALLFRSNFWAGGLPISGEWYVTSDDGTPLSFDDARAA
V
A
A
A
P
T
K
I
H
Q
G
----
R
V
G
-------------
P
-----
Y
P
L
---
P
A
----
K
-------
V
G
------
P
--
L
I
V
M
T
V
-------
W
G
G
E
---------
K
-------------------------------------
D
-----
L
-----
W
N
---------
C
T
-
R
---
P
---------------
D
G
S
---
R
F
L
C
A
D
-----------
Y
R
23
SP3
54.83
25%
46
* C8 *
-
1LO1
-
A:
[1-90]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AIPK
R
L
C
L
V
C
----
G
D---
I
A
S
-------------
G
-----
Y
H
Y
---
G
V
----
A
-------
S
C
------
E
--
A
C
K
A
F
F
-------
K
R
T
I
---------
Q
--------
G
N
I
E
-------
Y
S
---
C
P
A
T
-
N
E
-----
C
E
-----
I
-----
T
K
---------
R
R
-
R
KSC
Q
A
---
C
RFMKALK---
V
G
M
---
L
K
E
G
V
R
-
L
DRVR
G
G
R
Q
K
Y
K
29
SP3
50.31
25%
25
- C8 -
-
1R0N
-
B:
[7-92]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
L
C
L
V
C
---
G
D
----
R
A
S
-------------
G
-----
Y
H
Y
----------------------------
N
A
L
T
C
----------
E
G
CKGFFRRSV
T
--------
K
S
A
V
-------
Y
C
---
C
K
F
G
-
R
A
-----
C
E
-----
M
-----
D
M
---------
Y
M
-
R
---
R
K
---
C
QECRLKKCLA
V
G
M
---
R
P
E
C
V
V
-
P
ENQC
A
M
K
R
R
E
K
12
Fugue
47.39
20%
52
- C6 -
-
4WZ9
3
?
A:
[40-926]
QAVDERYRLPTTSIPIHYDLHLRTEIHRNERTFTGTVGIQLQVVQATDKLVMHNRGLVMSSAKVSSLPNGVTGAPTLIGDVQYSTDTTFEHITFTSPTILQPGTYLLEVAFQGRLATNDDGFYVSSYVADNGERRYLATTQFESTSARMAFPCYDEPGLKATFTVSITHSLSYKAISNMPQKTTTDIETDMRTTFFEKTPAMSTYLLAFVVSDFQLRLSGAQRVYVRPNAFNEATFALEAGVKILKVLDDHLGIPYDTYMPKLDQIAIPDFAAGAMENWGLVTYREQALLFNPAVSTYRGKTNVATTIAHEYAHQWFGNLVSPEWWEYIWLNEGFATLYEFYALDMAYPGQEYWELFNQQVIQYAMGQDGQASTRPMNWNAATPGEISALFDRVAYDKSGSVLNMMRHVLGDDNWKAGLKAYLTDRALQGAVDEQLYAGLQSAIEGKGVLPNGVTVAQIMR
T
W
T
------------
N
E
A
-------------
G
-----
Y
P
V
---
L
N
----
V
-------
R
R
SYDTGD
V
--
I
I
S
Q
E
R
-------
F
Y
N
D
---------
R
--------
K
V
P
N
TNIWMIP
Y
N
---
Y
V
H
Q
-
A
K
-----
A
D
-----
F
-----
N
E
---------
F
D
-
D
F--
Q
W
---
L
----------
A
T
K
---
A
A
R
I
E
T
-
T
----
V
P
A
N
E
W
I
30
SP3
45.15
13%
-8
- C5 -
-
1I2D
1
MET3_PENCH
A:
[391-573]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PRATQGFTIFLTGYMNSGKDAIARALQVTLNQQGGRSVSLLLGDTVRHELSSELGFTREDRHTNIQRIAFVATELTRAGAAVIAAPIAPYEESRKFARDAVSQ
A
G
S
F
F
L
V
H
V
A
T
PLEH
C
E
Q
-------------
S
-----
D
K
R
---
G
I
----
Y
-------
A
A
------
A
RR
G
E
I
K
G
F
-------
T
G
V
D
---------
D
--------
P
Y
E
T
-------
P
E
KAD
L
V
V
D
-
F
S
-----
K
Q
-----
S
-----
V
R
---------
S
I
-
V
---
H
E
---
I
----------
I
L
V
----
L
E
S
Q
G
-
F
----
L
E
R
Q
---
8
HHSearch
44.80
40%
-47
- C7 -
-
1ZOQ
-
IRF3_HUMAN
B:
[204-218]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
E
V
T
A
F
Y
R
G
----
R
Q
V
-------------
F
-----
Q
Q
--------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
HHSearch
43.95
23%
54
- C9 -
-
2ZYS
1
?
A:
[402-432]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
W
V
F
D
-
R
G
-----
A
D
-----
G
-----
K
S
DLDREVVRY
S
I
-
M
---
P
F
---
M
----------
S
A
A
---
D
L
-----------------
5
HHSearch
42.41
17%
-101
- C1 -
-
2F9H
-
?
A:
[84-123]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
T
L
I
F
A
D
----
A
P
T
DEDDVIRNGVYLT
P
-----
H
Q
L
---
P
K
----
I
--------
T
------
I
--
G
T
T
I
D
Y
-------
L
V
------------------------------------------------------------------------------------------------------------------------
24
SP3
42.40
10%
54
* C6 *
-
1V86
-
A:
[1-95]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGDAGGGVGK
E
L
V
D
L
K
I
I
W
N
K
----
T
K
H
-------------
D
-----
V
K
V
---
P
L
----
D
STGSELK
Q
K
------
I
--
H
S
I
T
G
L
-------
P
P
A
M
---------
Q
--------
K
V
M
--------
Y
K
---
G
L
V
P
-
E
D
-----
K
T
-----
L
-----
R
E
---------
I
K
V
T
---
S
G
---
A
----------
K
I
M
---
V
V
G
S
T
I
-
S
----
G
P
S
S
G
--
13
Fugue
40.97
25%
42
- C4 -
-
1TBA
-
TAF1_DROME
A:
[11-77]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
G
----
S
I
G
-------------
N
-----
G
L
D
---
L
T
----
G
-------
I
L
------
F
--
G
N
I
D
S
E
GRLLQDD
D
G
E
G
---------
R
--------
G
G
T
G
-------
F
D
---
A
E
L
R
-
E
N
-----
I
G
------------
S
---------
L
S
-
K
---
L
G
---
L
----------
D
S
M
---
L
L
E
V
I
D
-
L
----
K
E
A
----
7
HHSearch
40.33
23%
35
* C9 *
-
2ZYR
1
?
B:
[402-432]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
W
V
F
D
-
R
G
-----
A
D
-----
G
-----
K
S
DLDREVVRY
S
I
-
M
---
P
F
---
M
----------
S
A
A
---
D
L
-----------------
20
Fugue
38.96
14%
-
- C- -
-
4IL7
-
?
A:
[138-222]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------E
N
Y
L
I
Y
S
G
F
G
T
S
----
L
P
Q
-------------
T
-----
Y
T
I
---
P
A
----
N
-------
G
Y
------
L
--
I
I
S
I
T
N
-------
T
S
T
G
---------
N
IGQITLTI
G
S
T
T
-------
M
T
---
F
N
L
Q
-
T
G
-------------------
E
---------
N
K
-
I
---
P
V
---
I
----------
A
G
T
---
Q
I
T
N
M
T
-
L
----
T
S
S
S
A
I
L
28
SP3
38.77
20%
72
* C5 *
-
1K2Y
1
ALGC_PSEAE
X:
[5-154]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KAPTLPASIFRAYDIRGVVGDTLTAETAYWIGRAIGSESLAR
G
E
P
C
V
A
V
G
R
D
G
----
R
L
S
-------------
G
-----
P
E
L
---
V
K
----
Q
LIQGL--
V
D
------
C
--
G
C
Q
V
S
D
-------
V
G
M
V
---------
P
--------
T
P
V
L
-------
Y
Y
---
A
A
N
V
-
L
E
-----
G
K
-----
S
GVMLT
G
A
---------
H
N
-
P
---
P
D
---
Y
----------
N
G
F
---
K
I
V
V
A
G
E
T
----
L
A
N
E
Q
I
Q
10
HHSearch
38.11
40%
-37
* C7 *
-
5JEL
-
A:
[19-33]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
E
V
T
A
F
Y
R
G
----
R
Q
V
-------------
F
-----
Q
Q
--------------------------------------------------------------------------------------------------------------------------------------------------------------------
27
SP3
33.42
10%
-
- C5 -
-
1K0M
-
CLIC1_HUMAN
A:
[6-91]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
Q
V
E
L
F
V
K
A
----
G
S
D
-------------
G
-----
A
K
I
GNC
P
F
----
S
-------
Q
R
------
L
--
F
M
V
L
W
L
-------
K
G
----------------------
V
T
-------
F
N
---
V
T
T
V
-
D
-------------------
T
K
---------
R
R
-
T
---
E
T
---
V
------------
Q
---
K
L
C
P
G
G
-
E
----
L
P
F
L
L
Y
G