@TOME V2.3
(Mar 2018)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : M_BR29_EuGene_00014781: (2018-03-20 )
TQKCIITIRKADPALGQDTLYDLVSLAPNSDLTFGKIPASMTEVTFGVDEKCQARLVRGDLSRPYEYKGMQNPLYGLDGPDFVKKLQAWRRKPENSINFSLW
Atome Classification :
(20 SA)
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10..-.-...---------..20.........-30....-....40.....-.-..50--...----...-.-.60---.....--.----...70--.-.......80---....------------...-------.-90...-.-....100
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
Q
K
C
I
I
T
I
RKADP-A-L
G
Q
---------
D
T
L
-
Y
D
L
V
SLAPN-SDLTFG-KIPAS
M
T
E
V
T
F-G-V
D
E
K
--
C
Q
A
----
R
L
V
-R-GD----LSRPY--E----YKGMQ--N-PLYGLD
G
P
D
---
F
V
K
K
------------
L
Q
A
-------
W
-RRKPE-N-SINFSLW
32
Fugue
61.06
22%
-
- C5 -
-
4F6L
-
?
A:
[2013-2390]
-------------------------------------------------------------------------------------------------------------------------------------------VALPDNLSELQKIVMSRYNLGILEDSLSHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVVLPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISVGTYFD
I
D
T
E
D
V
T
F
S
E
A
D
V
-
Y
-
K
G
Q
----------------
L
L
T
S
P
Y
-
T
R
S
K
F
Y
-
S
E
L
K
V
L
E
A
V
N
N
-
G
-
L
D
------
G
----
R
I
V
-
R
V
G
N
----
L
T
S
P
Y
--
N
GRWH
M
R
N
I
K
--
T
-
N
R
F
S
M
V
M
N
D
---
L
L
Q
L
------------
D
C
I
-------
G
-
V
S
M
A
E
-
M
-
P
V
D
F
S
F
V
49
SP3
55.81
11%
-161
- C4 -
-
1H6K
-
NCBP2_HUMAN
X:
[38-118]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
S
C
T
L
Y
V
G
N
L
S
F
-
Y
-
T
T
E
---------
E
Q
I
-
Y
E
L
F
S
--------
K
S
G
-
D
I
----
K
K
I
I
M
-
G
-
L
D
K
M
--
C
G
F
----
C
F
V
-
E
-------
Y
Y
S
R
A
--
D
AENA
M
R
Y
I
N
--
G
---
T
R
L
D
D
-------
R
I
------------
I
-------------------
R
T
D
W
D
A
G
46
SP3
49.32
12%
68
- C4 -
-
1UFX
-
A:
[1-103]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSG
S
S
G
T
L
V
R
V
K
K
S
A
A
-
T
-
L
G
-----------------
I
A
I
E
G
G
-
A
N
--
T
R
-
Q
P
L
P
R
I
V
T
I
Q
R
-
G
G
S
A
H
N
--
C
-
G
----
Q
L
K
-
V
-
G
H
----
V
I
L
----
E
----
V
N
G
L
-----
T
L
R
G
K
E
H
R
E
---
A
A
R
I
------------
I
A
E
-------
A
-
F
K
T
K
D
R
D
-
Y
I
D
F
L
V
T
48
SP3
49.05
19%
83
* C4 *
-
1QAV
-
SNTA1_MOUSE
A:
[75-164]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GS
L
Q
R
R
R
V
T
V
R
K
A
D
A
-
G
G
L
G
-----------------
I
S
I
K
G
G
-
R
E
---
N
-
K
M
P
I
L
I
S
K
I
F
K
-
G
-
L
A
A
D
--
Q
T
E
----
A
L
F
-
V
-
G
D
----
A
I
--
L
--
S
----
V
N
G
E
-----
D
L
S
S
A
T
H
D
E
---
A
V
Q
A
------------
L
K
------------
K
T
G
-
K
-
E
V
V
L
E
V
K
45
SP3
48.60
12%
42
- C4 -
-
1Q3O
-
SHAN1_RAT
A:
[3-106]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DYII
K
E
K
T
V
L
L
Q
K
K
D
S
E
-
G
-
F
G
----------
F
V
L
-
R
G
A
K
A
Q
T
P
I
-
E
E
F
T
P
T
-
P
A
F
P
A
L
Q
Y
L
E
S
-
V
-
D
E
G
G
VA
W
R
A
----
G
L
R
-
M
-
G
D
FLIE
V
N
------------
G
Q
-----
N
V
V
K
V
G
H
R
Q
---
V
V
N
M
------------
I
R
Q
------------
G
G
-
N
-
T
L
M
V
K
V
V
31
Fugue
47.95
12%
-4
- C4 -
-
3MAH
-
?
A:
[7-151]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DCIKAVAAK
D
G
I
T
V
I
K
V
K
S
-
S
N
-
K
-
L
L
S
---------
W
H
F
M
R
K
L
F
E
I
F
E
F
-
Y
Q
E
P
V
D
M
V
A
T
-
S
E
V
G
V
S
L
-
T
-
I
D
N
D
--
K
N
L
----
P
D
I
-
V
-
R
A
----
L
S
D
I
G
--
D
----
V
T
V
D
K
--
D
M
V
I
I
C
I
V
G
V
G
---
F
E
A
R
------------
I
I
N
ALKGVPV
R
M
I
S
Y
G
G
-
S
-
N
Y
N
V
S
V
L
41
SP3
47.32
13%
-31
- C4 -
-
1IU0
-
DLG4_RAT
A:
[1-91]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
E
Y
E
E
I
T
L
E
R
G
N
S
-
G
-
L
G
-----------------
F
S
I
A
G
G
-
T
D
N
P
H
I
-
G
D
D
P
S
I
--
F
I
T
-
K
-
I
I
P
G
--
G
A
A
AQDG
R
L
R
-
V
-
N
D
------
S
I
L
--
F
----
V
N
E
V
-----
D
V
R
E
V
T
H
S
A
---
A
V
E
A
------------
L
K
------------
E
A
G
-
S
-
I
V
R
L
Y
V
M
35
Fugue
45.56
18%
113
* C5 *
-
2Y3U
1
?
A:
[15-695]
NLYFQGGTMYDFEYLNGLSYTELTNLIKNIKWNQINGLFNYSTGSQKFFGDKNRVQAIINALQESGRTYTANDMKGIETFTEVLRAGFYLGYYNDGLSYLNDRNFQDKCIPAMIAIQKNPNFKLGTAVQDEVITSLGKLIGNASANAEVVNNCVPVLKQFRENLNQYAPDYVKGTAVNELIKGIEFDFSGAAYEKDVKTMPWYGKIDPFINELKALGLYGNITSATEWASDVGIYYLSKFGLYSTNRNDIVQSLEKAVDMYKYGKIAFVAMERITWDYDGIGSNGKKVDHDKFLDDAEKHYLPKTYT
F
D
N
G
T
F
I
I
R
A
G
D
K
---
V
S
E
---------
E
K
I
-
K
R
L
Y
W
A
S
R
E
-
V
K
S
Q
F
H
-
R
V
V
G
N
D
K
A
L
E
V
-
G
-
N
A
D
D
--
V
L
T
M---
K
I
F
----------
N
S
P
E
--
E
----
Y
K
-
F
N
--
T
-
N
I
N
G
V
S
T
D
N
GGL
Y
I
E
P
RGT---------
F
Y
T
-------
Y
-
E
R
T
P
Q
-
Q
-
S
I
-
F
S
L
E
42
SP3
45.34
14%
57
- C4 -
-
1MFG
-
A:
[1-95]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G
S
M
E
I
R
V
R
V
E
K
-
D
P
-
E
-
L
G
-----------------
F
S
I
S
G
G
-
V
G
G
R
G
N
-
P
F
R
P
D
D
D
G
I
F
V
T
R
-
V
Q
P
E
--
G
P
A
SK--
L
L
Q
-
P
-
G
D
------
K
I
I
--
Q
----
A
N
G
Y
-----
S
F
I
N
I
E
H
G
Q
---
A
V
S
L
------------
L
K
T
------------
F
Q
-
N
-
T
V
E
L
I
I
V
44
SP3
44.04
10%
-89
- C- -
-
1AY7
-
BARS_BACAM
B:
[1-89]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
K
A
V
I
N
G
E
Q
I
R
-----
S
I
---------
S
D
L
-
H
Q
T
L
K
-------
K
E
L
A
--
L
P
E
Y
-----
Y
-
G
-
E
N
L
D
--
A
L
W
----
D
C
L
-
T
-
G
W
----
V
E
Y
P
L
VL
E
----
W
R
Q
F
E
QS
K
-
Q
L
T
E
N
G
A
E
S
---
V
L
Q
V
------------
F
R
E
-------
A
-
K
A
E
G
C
-
D
I
T
I
I
L
S
--
43
SP3
43.94
15%
49
- C4 -
-
1D5G
-
A:
[1-96]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PKP
G
D
I
F
E
V
E
L
A
K
N
D
N
-
S
-
L
G
-----------------
I
S
V
T
G
G
-
V
N
T
S
V
R
-
H
G
G
I
Y
V
K
A
V
I
P
-
Q
-
G
A
A
E
--
S
D
G
----
R
I
H
-
K
-
G
D
------
R
V
L
--
A
----
V
N
G
V
-----
S
L
E
G
A
T
H
K
Q
---
A
V
E
T
------------
L
R
------------
N
T
G
-
Q
-
V
V
H
L
L
L
E
38
Fugue
41.57
13%
-61
- C4 -
-
4EYT
-
?
A:
[10-106]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
Q
N
C
L
I
K
I
I
N
I
P
Q
G
T
-
L
K
A
---------
E
V
V
-
L
A
V
R
H
L
G
Y
E
-
F
Y
C
D
Y
I
-
D
G
Q
A
M
I
R
F
Q
N
S
-
D
-
E
Q
R
L
--
A
I
Q
----
K
L
L
N
H
-
N
N
----
N
K
L
Q
I
--
E
----
I
R
G
Q
I
--
C
-
D
V
I
S
T
I
P
E
D
---
E
E
K
N
------------
Y
W
N
-------
Y
-
I
K
F
K
K
-
N
--------
36
Fugue
40.84
16%
87
- C5 -
-
4DID
-
SOPB_SALTY
B:
[16-142]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
R
P
E
I
I
V
L
R
E
P
G
A
-
T
-
W
G
N
YLQHQKASN
H
S
L
-
H
N
L
Y
N
L
Q
R
D
-
L
L
T
V
A
A
-
T
V
L
G
K
Q
D
P
V
L
T
-
S
-
M
A
N
Q
--
M
E
L
----
A
K
V
-
K
-
A
D
RPAT
K
Q
E
E
A
--
A
----
A
K
A
L
K
--
K
-
N
L
I
E
L
I
A
A
R
---
T
Q
Q
Q
DGLPAKEAHRFA
A
V
A
-------
F
-
R
D
A
Q
V
-
K
-
Q
L
N
N
Q
P
W
10
PsiBlast_PDB
40.44
31%
-12
- C7 -
-
4MS3
-
GABR2_HUMAN
B:
[66-110]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
C
D
N
-
A
-
K
G
L
---------
K
A
F
-
Y
D
A
I
K
Y
G
P
N
-
H
L
M
V
F
G
-
G
V
C
P
S
V
T
S
I
----------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
39.85
31%
-18
- C7 -
-
4MQF
-
GABR2_HUMAN
B:
[66-112]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
C
D
N
-
A
-
K
G
L
---------
K
A
F
-
Y
D
A
I
K
Y
G
P
N
-
H
L
M
V
F
G
-
G
V
C
P
S
V
T
S
I
----------------------------------------------------------------------------------------------------------
11
PsiBlast_PDB
39.72
31%
-4
- C7 -
-
4MS4
-
GABR2_HUMAN
B:
[66-110]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
C
D
N
-
A
-
K
G
L
---------
K
A
F
-
Y
D
A
I
K
Y
G
P
N
-
H
L
M
V
F
G
-
G
V
C
P
S
V
T
S
I
----------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
39.55
31%
-11
- C7 -
-
4MR9
-
GABR2_HUMAN
B:
[66-112]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
C
D
N
-
A
-
K
G
L
---------
K
A
F
-
Y
D
A
I
K
Y
G
P
N
-
H
L
M
V
F
G
-
G
V
C
P
S
V
T
S
I
----------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
39.07
31%
-4
- C7 -
-
4MR8
-
GABR2_HUMAN
B:
[66-112]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
C
D
N
-
A
-
K
G
L
---------
K
A
F
-
Y
D
A
I
K
Y
G
P
N
-
H
L
M
V
F
G
-
G
V
C
P
S
V
T
S
I
----------------------------------------------------------------------------------------------------------
40
Fugue
38.69
15%
15
- C5 -
-
1P9Y
1
TIG_ECOLI
A:
[4-120]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MQVSVETTQGL
G
R
R
V
T
I
T
I
A
A
D
S
I
-
E
-
T
A
V
---------
K
S
E
-
L
V
N
V
A
K
K
V
R
I
D
G
L
R
K
G
-
K
V
P
M
N
I
V
A
Q
R
Y
-
G
---
A
S
--
V
R
Q
----
D
V
L
-
G
-
D
L
----
M
S
R
N
F
--
I
----
D
A
I
I
K
--
E
-
K
I
N
P
A
G
A
P
T
---
Y
V
P
G
------------
E
Y
K
-------
L
-
G
E
D
F
T
-
Y
-
S
V
E
F
E
V
Y
8
PsiBlast_PDB
38.55
31%
-10
- C7 -
-
4MRM
-
GABR2_HUMAN
B:
[66-115]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
C
D
N
-
A
-
K
G
L
---------
K
A
F
-
Y
D
A
I
K
Y
G
P
N
-
H
L
M
V
F
G
-
G
V
C
P
S
V
T
S
I
----------------------------------------------------------------------------------------------------------