@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VNW6: (2017-11-18 )
MNKSELIDAIAEKGGVSKTDAGKALDATIASITEALKKGDTVTLVGFGTFSVKERAARTGRNPKTGEELQIKATKVPSFKAGKGLKDSVA

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_D_2(1OWG)
IHFB_ECOLI
[Raw transfer]

-

NACID_D_2(1OWG)
IHFB_ECOLI
[Raw transfer]

-

NACID_D_2(1OUZ)
IHFB_ECOLI
[Raw transfer]

-

NACID_F_2(1P51)
DBH_NOSS1
[Raw transfer]

-

FMT_B_6(4PT4)
DBH_MYCTO
[Raw transfer]




NACID_I_3(1P51)
DBH_NOSS1
[Raw transfer]

-

NACID_D_2(1P78)
DBH_NOSS1
[Raw transfer]

-

NACID_C_3(4QJU)
DBH_STAAM
[Raw transfer]

-

NACID_D_2(2HT0)
IHFB_ECOLI
[Raw transfer]

-

NACID_D_4(4QJU)
DBH_STAAM
[Raw transfer]

-

NACID_D_2(1P71)
DBH_NOSS1
[Raw transfer]

-

NACID_D_2(1P71)
DBH_NOSS1
[Raw transfer]

-

NACID_D_2(1P71)
DBH_NOSS1
[Raw transfer]

-

NACID_D_2(1P71)
DBH_NOSS1
[Raw transfer]

-

NACID_D_4(4QJU)
DBH_STAAM
[Raw transfer]

-

NACID_D_2(1OWF)
IHFB_ECOLI
[Raw transfer]

-

NACID_D_2(1OWF)
IHFB_ECOLI
[Raw transfer]

-

NACID_D_2(1IHF)
IHFB_ECOLI
[Raw transfer]

-

56 HHSearch 87.1562% -52 - C6 -4YF0 - DBHA_ECOLI -
47 HHSearch 83.7267% -13 - C6 -1HUE - DBH_GEOSE -
46 HHSearch 83.5070% -73 - C6 -4P3V - DBHB_ECOLI -
8 PsiBlast_PDB 82.8962% -89 - C6 -4YFH - DBHA_ECOLI -
3 PsiBlast_PDB 82.7467% -13 - C6 -1HUE - DBH_GEOSE -
45 HHSearch 82.4458% -39 - C6 -4QJN - DBH_STAAM -
2 PsiBlast_PDB 82.1270% -73 - C6 -4P3V - DBHB_ECOLI -
5 PsiBlast_PDB 82.0269% -79 - C6 -4YEW - DBHB_ECOLI -
1 PsiBlast_PDB 81.9170% -64 - C6 -2O97 - DBHB_ECOLI -
49 HHSearch 81.5456% - - C6 -3RHI - ? -
12 PsiBlast_PDB 81.5358% -43 - C6 -4QJN - DBH_STAAM -
9 PsiBlast_PDB 81.5162% -85 - C6 -4YEY - DBHA_ECOLI -
27 PsiBlast_CBE 81.1455% -18 - C6 -1P51 4.7 DBH_NOSS1
58 HHSearch 80.9369% -74 - C6 -4YFT - DBHB_ECOLI -
51 HHSearch 80.1262% -84 - C6 -1MUL - DBHA_ECOLI -
13 PsiBlast_PDB 79.9158% -35 - C6 -4QJU 5.9 DBH_STAAM
6 PsiBlast_PDB 79.7769% -74 - C6 -4YFT - DBHB_ECOLI -
33 PsiBlast_CBE 79.4944% -49 - C6 -4PT4 2.7 DBH_MYCTO (first)
25 PsiBlast_CBE 79.4055% -13 - C6 -1P51 - DBH_NOSS1 -
10 PsiBlast_PDB 78.7362% -84 - C6 -1MUL - DBHA_ECOLI -
22 PsiBlast_CBE 78.5158% -14 - C6 -4QJU 6.2 DBH_STAAM
26 PsiBlast_CBE 77.8955% -17 - C6 -1P51 5.1 DBH_NOSS1
23 PsiBlast_CBE 76.6155% -21 - C6 -1P78 4.5 DBH_NOSS1
54 HHSearch 76.5756% -8 - C6 -1P71 1128214396763122245304320.0 DBH_NOSS1
17 PsiBlast_PDB 76.2355% -8 - C6 -1P71 1128214396763122245304320.0 DBH_NOSS1
55 HHSearch 76.1856% -19 - C6 -1P71 1128214396763122245304320.0 DBH_NOSS1
24 PsiBlast_CBE 75.8455% -19 - C6 -1P71 1128214396763122245304320.0 DBH_NOSS1
65 HHSearch 65.1338% 79 - C6 -1OWF 3.3 IHFB_ECOLI
39 PsiBlast_CBE 64.0638% 78 - C6 -1OWF 3.3 IHFB_ECOLI
40 PsiBlast_CBE 63.4838% 84 - C6 -1OUZ 2.0 IHFB_ECOLI
43 PsiBlast_CBE 62.7438% 92 - C6 -1IHF 3.6 IHFB_ECOLI
52 HHSearch 62.2238% 88 - C6 -1OWG Error IHFB_ECOLI
42 PsiBlast_CBE 62.1638% 87 - C6 -1OWG Error IHFB_ECOLI
41 PsiBlast_CBE 60.1438% 93 - C6 -2HT0 4.5 IHFB_ECOLI