@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VPZ5: (2017-11-24 )
MLIHLFFRNNKKSKMHLKLNNYLISGEYMNIPRFGLGTFRLKEQAVIDSVKNALDVGYRAIDTAQIYENEAAIGQAIAESGVSRQDLFLTTKIWVDNFAQDKFIPSLKESLQKLRTDHVDLTLIHWPAPDLGVSIPEIMQLLLEAKQQGLTKQIGISNFNIALTQQAIDTIGVEHIATNQIELSPYLQNHKLVNFLQEKNIDVTSYMTLAYGKVLQDPVLAEIAAANKATTAQIALAWALQRGFAVIPSSTKRENLISNLKAQDIELTAAEMQMIAELDRNSREVSPEPWAPVWD

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_B_6(3WBW)
?
[Raw transfer]



NDP_A_4(3WBW)
?
[Raw transfer]



NAP_B_2(1A80)
DKGA_CORSC
[Raw transfer]



NAP_B_2(1A80)
DKGA_CORSC
[Raw transfer]



NAD_C_3(1M9H)
DKGA_CORSC
[Raw transfer]



NAP_A_3(3UZZ)
AK1D1_HUMAN
[Raw transfer]



EDO_A_10(4F40)
PGFS_LEIMA
[Raw transfer]



EDO_B_20(4F40)
PGFS_LEIMA
[Raw transfer]



GOL_C_10(3O0K)
?
[Raw transfer]



GOL_D_12(3O0K)
?
[Raw transfer]



GLU_A_3(4FZI)
PGFS_TRYCC
[Raw transfer]



NA7_A_3(2WZM)
Y2407_MYCS2
[Raw transfer]



NA7_B_4(2WZM)
Y2407_MYCS2
[Raw transfer]



CIT_F_6(1VBJ)
PGFS_TRYBB
[Raw transfer]



CIT_E_5(1VBJ)
PGFS_TRYBB
[Raw transfer]



GOL_D_12(3O0K)
?
[Raw transfer]



GLU_B_4(4FZI)
PGFS_TRYCC
[Raw transfer]



GOL_D_12(3O0K)
?
[Raw transfer]



GOL_C_10(3O0K)
?
[Raw transfer]



IMN_B_9(4JQ4)
AK1C2_HUMAN
[Raw transfer]



ID8_A_3(4JQA)
AK1C2_HUMAN
[Raw transfer]



ID8_B_7(4JQA)
AK1C2_HUMAN
[Raw transfer]



GOL_C_10(3O0K)
?
[Raw transfer]
123 HHSearch 91.7143% -79 - C6 -3UP8 - ? -
1 PsiBlast_PDB 90.5243% -77 - C6 -3UP8 - ? -
15 PsiBlast_PDB 87.0137% -92 - C6 -2WZM 4.6 Y2407_MYCS2
33 PsiBlast_CBE 86.6937% -92 - C6 -2WZM 3.0 Y2407_MYCS2
10 PsiBlast_PDB 86.2637% -99 - C6 -4OTK - Y2971_MYCTU -
125 HHSearch 85.2034% -91 - C6 -2WZM - Y2407_MYCS2 -
122 HHSearch 84.8135% -93 - C6 -4OTK - Y2971_MYCTU -
3 PsiBlast_PDB 83.7937% -90 - C6 -3O0K 2.7 ?
16 PsiBlast_PDB 82.9937%-101 - C- -2WZT - Y2407_MYCS2 -
22 PsiBlast_CBE 82.9137% -87 - C6 -3O0K 2.7 ?
24 PsiBlast_CBE 82.8837% -92 - C6 -3O0K 2.7 ?
26 PsiBlast_CBE 82.8635% -80 - C6 -3WBW 9.8 ?
18 PsiBlast_PDB 82.6239% -60 - C6 -1M9H 6.6 DKGA_CORSC
124 HHSearch 82.4233% -79 - C6 -3WBW - ? -
17 PsiBlast_PDB 82.2539% -57 - C6 -1A80 8.3 DKGA_CORSC
4 PsiBlast_PDB 81.6635% -75 - C6 -3WBW 7.6 ?
28 PsiBlast_CBE 81.5435% -80 - C6 -3WBY - ? -
140 HHSearch 81.2135% -91 - C6 -3O0K 2.7 ?
8 PsiBlast_PDB 81.1035% -81 - C6 -3WBY - ? -
23 PsiBlast_CBE 80.8337% -92 - C6 -3O0K 2.8 ?
139 HHSearch 80.6735% -91 - C6 -3O0K 2.7 ?
132 HHSearch 78.4038% -57 - C6 -1A80 9.6 DKGA_CORSC
32 PsiBlast_CBE 75.0435% 6 - C6 -4F40 2.5 PGFS_LEIMA
12 PsiBlast_PDB 74.8735% 10 - C6 -4F40 2.3 PGFS_LEIMA
59 PsiBlast_CBE 70.6933% -19 - C6 -1VBJ 3.2 PGFS_TRYBB
58 PsiBlast_CBE 69.9033% -18 - C6 -1VBJ 3.7 PGFS_TRYBB
6 PsiBlast_PDB 69.5233% 3 - C6 -4FZI 2.7 PGFS_TRYCC
27 PsiBlast_CBE 68.9533% -15 - C6 -4FZI 2.1 PGFS_TRYCC