@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1429: (2018-01-12 )
MTKKIVAIWAQDEEGLIGKENRLPWHLPAELQHFKETTLNHAILMGRVTFDGMGRRLLPKRETLILTRNPEEKIDGVATFQDVQSVLDWYQDQEKNLYIIGGKQIFQAFEPYLDEVIVTHIHARVEGDTYFPEELDLSLFETVSSKFYAKDEKNPYDFTIQYRKRKEV

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EKB_A_4(3JWC)
?
[Raw transfer]



9DR_B_10(3SAI)
?
[Raw transfer]



7DR_B_6(3SA2)
?
[Raw transfer]



9DR_A_4(3SAI)
?
[Raw transfer]



EKB_A_4(3JVX)
?
[Raw transfer]



5WA_B_6(3JWF)
?
[Raw transfer]



N22_B_6(3E0B)
?
[Raw transfer]



5WB_B_6(3JWK)
?
[Raw transfer]



6DR_B_6(3SA1)
?
[Raw transfer]



N22_A_4(3E0B)
?
[Raw transfer]



5WB_A_4(3JWK)
?
[Raw transfer]



5WA_A_4(3JWF)
?
[Raw transfer]



TOP_A_3(3TQ8)
?
[Raw transfer]



TOP_A_3(3TQ8)
?
[Raw transfer]



RAR_A_2(4M7V)
?
[Raw transfer]



FOL_A_3(3TQB)
?
[Raw transfer]



FOL_B_7(2ZZA)
?
[Raw transfer]



FOL_A_4(2ZZA)
?
[Raw transfer]



MTX_B_6(3IX9)
DYR_STRPN
[Raw transfer]



NDP_A_3(3IX9)
DYR_STRPN
[Raw transfer]



NDP_A_3(3IX9)
DYR_STRPN
[Raw transfer]



NAP_A_3(4M7V)
?
[Raw transfer]



NDP_B_5(3IX9)
DYR_STRPN
[Raw transfer]



NAP_A_2(4M7U)
?
[Raw transfer]



MTX_A_3(3TQ9)
?
[Raw transfer]
21 PsiBlast_CBE 97.9794%-148 - C6 -3IX9 12.1 DYR_STRPN
1 PsiBlast_PDB 94.8994%-142 - C6 -3IX9 12.3 DYR_STRPN
117 HHSearch 89.8693%-113 - C6 -3IX9 12.3 DYR_STRPN
3 PsiBlast_PDB 77.4945%-154 - C6 -4M7V 11.1 ?
2 PsiBlast_PDB 77.4843%-141 - C6 -4M7U 12.1 ?
7 PsiBlast_PDB 76.9840%-168 - C6 -3JWC 5.3 ?
9 PsiBlast_PDB 76.7440%-163 - C6 -3JWK 5.0 ?
124 HHSearch 76.7238%-146 - C6 -4ELB - ? -
119 HHSearch 76.4438%-147 - C6 -3S9U - ? -
30 PsiBlast_CBE 76.3340%-166 - C6 -3SAI 6.6 ?
10 PsiBlast_PDB 76.3240%-164 - C6 -3JVX 5.3 ?
25 PsiBlast_CBE 75.9040%-167 - C6 -3JWF 5.3 ?
15 PsiBlast_PDB 75.7540%-165 - C6 -3S9U - ? -
8 PsiBlast_PDB 75.7040%-166 - C6 -3JWF 4.7 ?
91 PsiBlast_CBE 75.3141%-168 - C6 -3TQ9 8.7 ?
31 PsiBlast_CBE 75.2840%-168 - C6 -3SA2 7.1 ?
29 PsiBlast_CBE 75.2440%-163 - C6 -3JVX - ? -
28 PsiBlast_CBE 75.1540%-166 - C6 -3JWM - ? -
27 PsiBlast_CBE 75.0240%-157 - C6 -3JW5 - ? -
89 PsiBlast_CBE 75.0041%-173 - C6 -3TQB 7.6 ?
105 PsiBlast_CBE 74.4436%-144 - C6 -2ZZA 8.4 ?
104 PsiBlast_CBE 74.4036%-144 - C6 -2ZZA 8.1 ?
92 PsiBlast_CBE 72.2741%-151 - C6 -3TQ8 4.8 ?
115 HHSearch 71.3941%-151 - C6 -3TQ8 4.8 ?