@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VUU0: (2017-12-20 )
MQVYLVGGAVRDYLLGHSYQEKDYVVVGATPEHMLAQGFQPVGKDFPVFLHPETKEEYALARTERKSGQGYHGFQFFTDTTVSLEDDLIRRDLTINAIAMDQDGKIYDPYGGQNDLENKILRHVSEAFAEDPLRVLRVARFAARYFPYGFQIAPETLQLMQTMADSGELDALTPERVWKETSRALMENHADIYFQTLRDCGALKHLFPEIDALFGVPQRPEYHPEVDCGIHTLMSLQQACKSNYSLDVRFAVLVHDLGKALTPAKELPRHIMHEERGIKPVTQLCERLRVPTQTKQLALSVCKEHLKCHQIMSLKPGTLWRLLQRLDVLRRPERVEAFVQACECDAKGRLGLEDRPYPQAQYMREAMQIVRSIKVQDLPENIKGAEIGEMLIQYRIEALAEFKNQHQSLSHS

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

APC_F_6(1VFG)
?
[Raw transfer]



ATP_B_5(4WC0)
?
[Raw transfer]



ATP_A_7(1MIW)
CCA_GEOSE
[Raw transfer]



CTP_A_3(4WC5)
?
[Raw transfer]



CTP_A_3(4WC1)
?
[Raw transfer]



ATP_A_3(4WC0)
?
[Raw transfer]



CTP_A_3(4WC7)
?
[Raw transfer]



APC_E_5(1VFG)
?
[Raw transfer]



ATP_A_3(4WC6)
?
[Raw transfer]



CTP_B_8(1MIY)
CCA_GEOSE
[Raw transfer]



CTP_A_7(1MIY)
CCA_GEOSE
[Raw transfer]



APC_A_3(4WC2)
?
[Raw transfer]



ATP_A_3(4WC4)
?
[Raw transfer]



CTP_B_4(4WC1)
?
[Raw transfer]



GOL_A_4(3AQL)
?
[Raw transfer]
34 HHSearch 77.7324% -16 * C3 *3WFO - ? -
36 HHSearch 76.6227% 4 - C3 -3WFP - ? -
1 PsiBlast_PDB 76.0929% - - C3 -3H38 - ? -
37 HHSearch 75.2727% 1 - C3 -3WFP - ? -
3 PsiBlast_PDB 72.9029% 4 - C3 -5HC9 - ? -
46 HHSearch 72.8322% -2 - C3 -5HC9 - ? -
42 HHSearch 70.5724% -0 - C3 -1MIW 5.5 CCA_GEOSE
48 HHSearch 68.3624% -3 - C3 -3AQL - ? -
41 HHSearch 68.2324% 3 - C3 -1MIV - CCA_GEOSE -
65 Fugue 67.7022% 23 - C3 -3AQL - ? -
2 PsiBlast_PDB 67.4829% 5 - C3 -3H3A - ? -
64 Fugue 65.9825% 38 - C3 -4X4W - TRNT1_HUMAN -
45 HHSearch 65.8324% -11 - C3 -3AQK - ? -
49 HHSearch 65.7225% 30 - C3 -4X4W - TRNT1_HUMAN -
17 PsiBlast_PDB 64.4631% -11 - C3 -3AQM - ? -
35 HHSearch 64.2123% - - C3 -4X0A - ? -
20 PsiBlast_PDB 63.8130% -11 - C3 -3AQN - ? -
38 HHSearch 63.3523% 16 - C3 -4WBY - ? -
22 PsiBlast_CBE 62.5533% -23 - C3 -4WC0 5.5 ?
6 PsiBlast_PDB 62.5333% -15 - C3 -4WC0 5.4 ?
19 PsiBlast_PDB 62.2630% -13 - C3 -3AQL 2.7 ?
7 PsiBlast_PDB 62.0233% -14 - C3 -4WC1 3.8 ?
11 PsiBlast_PDB 61.5033% -9 - C3 -4WC5 5.5 ?
21 PsiBlast_CBE 60.7833% -13 - C3 -4WC1 3.7 ?
8 PsiBlast_PDB 60.3333% -6 - C3 -4WC2 5.3 ?
10 PsiBlast_PDB 60.2533% -8 - C3 -4WC4 4.8 ?
12 PsiBlast_PDB 60.2333% -6 - C3 -4WC6 5.7 ?
13 PsiBlast_PDB 59.9833% -8 - C3 -4WC7 4.1 ?
26 PsiBlast_CBE 59.6138% -35 - C3 -1MIY 4.1 CCA_GEOSE
25 PsiBlast_CBE 59.1438% -35 - C3 -1MIY 4.9 CCA_GEOSE
4 PsiBlast_PDB 59.0033% -4 - C3 -1VFG 5.4 ?
23 PsiBlast_CBE 58.8033% -5 - C3 -1VFG 5.1 ?