@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XX15: (2018-01-01 )
MEDQYVQAMTIAGSDSDGSAGMQADMHTFFTRNVYGVSVMTACVAGNSYGIGASVTLPTDFIDKEFELIAKDFQIRAAKTGMLADSKLIETVVKNYQKYDFGPLVVDPVIVTKHGNLLLEESALQSLKEKLVPLAEVLTPNFYEAEKLTGRTLAAEEDFVQAAKELQDMGAKNVMIKGHHAKNAQQETVNDYVLFESGKSFWLNAPFYPTDRINGTGDSLSACIAAELAKGKTVEQAIRLAKDYVNRAIREEINVGHKYGPINHWAAGELE

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UEG_D_15(4C5N)
?
[Raw transfer]




UEG_D_11(4C5L)
?
[Raw transfer]




UEG_A_5(4C5L)
?
[Raw transfer]




UEG_C_10(4C5L)
?
[Raw transfer]




PXL_C_11(4C5N)
?
[Raw transfer]




PXL_A_5(4C5N)
?
[Raw transfer]




HMH_H_8(1JXI)
THID_SALTY
[Raw transfer]




HMH_H_8(1JXI)
THID_SALTY
[Raw transfer]




PLP_A_2(4YWR)
?
[Raw transfer]




PXL_B_7(4C5N)
?
[Raw transfer]




EDO_A_3(4YL5)
?
[Raw transfer]




89 HHSearch 87.6642% -89 - C2 -1UB0 - ? -
5 PsiBlast_PDB 86.4242% -91 - C2 -1UB0 - ? -
4 PsiBlast_PDB 81.8032% -71 - C2 -1JXI - THID_SALTY -
26 PsiBlast_CBE 81.5932% -72 - C2 -1JXI 3.3 THID_SALTY
1 PsiBlast_PDB 81.4437%-104 - C2 -4JJP - ? -
86 HHSearch 80.5533% -69 - C2 -1JXI 3.3 THID_SALTY
3 PsiBlast_PDB 80.4232% -79 - C2 -1JXH - THID_SALTY -
21 PsiBlast_CBE 80.3137%-113 - C2 -4JJP - ? -
85 HHSearch 79.9033% -75 - C2 -1JXH - THID_SALTY -
105 Fugue 78.8732% -68 - C2 -1JXH - THID_SALTY -
24 PsiBlast_CBE 77.8637% 13 - C2 -2I5B - PDXK_BACSU -
23 PsiBlast_CBE 77.6337% 9 - C2 -2I5B - PDXK_BACSU -
2 PsiBlast_PDB 77.2337% 11 - C2 -2I5B - PDXK_BACSU -
22 PsiBlast_CBE 77.2137% 11 - C2 -2I5B - PDXK_BACSU -
93 HHSearch 75.8837% 14 - C2 -2I5B - PDXK_BACSU -
91 HHSearch 74.8135% -56 - C2 -4JJP - ? -
99 HHSearch 74.5430% -34 - C2 -3RM5 - THI20_YEAST -
25 PsiBlast_CBE 74.5337% 13 - C2 -2I5B - PDXK_BACSU -
100 HHSearch 74.1930% -22 - C2 -3RM5 - THI20_YEAST -
90 HHSearch 73.9835% -59 - C2 -4JJP - ? -
35 PsiBlast_CBE 72.5233% 5 - C2 -4C5L 2.9 ?
28 PsiBlast_CBE 71.9633% 7 - C2 -4C5N 2.1 ?
34 PsiBlast_CBE 71.5233% 7 * C2 *4C5L 3.7 ?
29 PsiBlast_CBE 71.4733% 7 - C2 -4C5N 2.6 ?
8 PsiBlast_PDB 70.8233% 7 - C2 -4C5L 2.3 ?
10 PsiBlast_PDB 70.3933% 3 - C2 -4C5N 3.6 ?
30 PsiBlast_CBE 68.4633% 4 - C2 -4C5N 2.9 ?