@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XYF3: (2018-01-09 )
MNENPLAVKLPGLELKNPIMPASGCFGFGKEYGKYYDLNQLGSIMVKATTPNARFGNPTPRVAETPSGMLNAIGLQNPGLDVVMHKLLPELEEYNELPIIANVAGACEEDYVEVCSKIGEAPNVKAIELNISCPNVKHGGIAFGTDSDVAFQLTQAVKKVSSVPVYVKLSPNVTDIVPIAQAIEAGGADGFTMINTLLGMRIDLKTRKPILANQTGGLSGPAIKPVAIRLIHQVASISSLPIIGMGGVQTVDDVLEMFMAGASAVAIGTANFTDPYICPKLIKELPVRMSELGIESLERLIKEVREERER

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EJZ_B_11(3MHU)
?
[Raw transfer]



OXC_A_5(2E6F)
PYRD_TRYCC
[Raw transfer]



IJZ_B_10(3MJY)
?
[Raw transfer]



ORO_C_25(3C61)
?
[Raw transfer]



ORO_B_23(3C61)
?
[Raw transfer]



FMN_A_3(1EP3)
PYRDB_LACLM
[Raw transfer]



FMN_A_3(1EP1)
PYRDB_LACLM
[Raw transfer]



FUM_A_4(3TQ0)
?
[Raw transfer]



DHB_B_8(2BSL)
PYRDA_LACLM
[Raw transfer]



FUM_B_12(3TQ0)
?
[Raw transfer]



FUM_B_12(3TQ0)
?
[Raw transfer]



FMN_A_5(5KSW)
PYRDB_LACLA
[Raw transfer]



FMN_A_3(1EP2)
PYRDB_LACLM
[Raw transfer]



FMN_A_5(5KSW)
PYRDB_LACLA
[Raw transfer]



FMN_C_13(5KSW)
PYRDB_LACLA
[Raw transfer]



GOL_A_16(3W88)
PYRD_TRYCC
[Raw transfer]



ACY_A_7(1JUE)
PYRDA_LACLM
[Raw transfer]



FAD_B_4(1EP3)
PYRDB_LACLM
[Raw transfer]



FAD_B_4(1EP3)
PYRDB_LACLM
[Raw transfer]
4 PsiBlast_PDB 90.7074% -50 - C1 -1EP3 8.1 PYRDB_LACLM
2 PsiBlast_PDB 90.4874% -45 - C1 -1EP1 8.8 PYRDB_LACLM
1 PsiBlast_PDB 90.1173% -47 - C1 -5KSW 8.7 PYRDB_LACLA
3 PsiBlast_PDB 88.2874% -46 - C1 -1EP2 8.6 PYRDB_LACLM
21 PsiBlast_CBE 88.0373% -42 - C1 -5KSW 8.6 PYRDB_LACLA
70 HHSearch 85.5175% -18 - C1 -1EP3 2.1 PYRDB_LACLM
66 HHSearch 84.8874% -22 - C1 -5KSW 8.7 PYRDB_LACLA
55 Fugue 80.2072% -4 - C1 -1EP3 2.1 PYRDB_LACLM
34 PsiBlast_CBE 64.2131% -43 - C1 -3C61 - ? -
35 PsiBlast_CBE 64.1231% -42 - C1 -3C61 3.2 ?
36 PsiBlast_CBE 63.8131% -40 - C1 -3C61 2.7 ?
71 HHSearch 62.7530% -39 - C1 -4EF8 - ? -
17 PsiBlast_PDB 62.5131% -43 - C1 -3C61 - ? -
74 HHSearch 61.5230% -39 - C1 -3TQ0 3.2 ?
48 PsiBlast_CBE 61.4831% -39 - C1 -4EF9 - ? -
68 HHSearch 61.4527% -42 - C1 -3W88 3.3 PYRD_TRYCC
49 PsiBlast_CBE 61.3531% -41 - C1 -4EF8 - ? -
42 PsiBlast_CBE 61.1231% -38 - C1 -3TQ0 3.2 ?
47 PsiBlast_CBE 61.0931% -41 - C1 -4EF9 - ? -
50 PsiBlast_CBE 61.0131% -40 - C1 -4EF8 - ? -
41 PsiBlast_CBE 60.0531% -38 - C1 -3TQ0 3.2 ?
12 PsiBlast_PDB 49.7330% -29 - C1 -1JUE 3.0 PYRDA_LACLM