@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0742: (2016-03-18 )
MLVGNNIAKSYPNKLVLQNVDFEAKSGDMIVLTGENGSGKTTLLDMLASLKKPDSGTLELDNELFTTNDIRQQIAYLNNELYAKKSTTIEDFMKQHGLLFENIELDKWDRLLAGWRINKRLKLGELSTGMLMKVKIGSVLARKAKLYLYDEPFASIDIMARSEVMKAIISETNPDAITIISSHHLEGTEKLYSKLWLIKDNTLQTIETETYREETGNALIDFYKEEMNK

Atome Classification :

(20 SA) ---.........10.--.----..-....20........30........40........50.......-----.60-...----.--..----------------.------..--70.---.----..----....--80.-...--.-------...90-----..---......100---.----........110-.-----------------.......--.---120---------.---.---------------...---------....130.......140.......150.......160.......170.-.--..--....-180........190.--......200..-------....-.--.210....-...220.......--------------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ---MLVGNNIAKSYP--N----KL-VLQNVDFEAKSGDMIVLTGENGSGKTTLLDMLASLKKPDSGTL-----EL--DNE----L--FT----------------T------ND--IRQ---Q----IA----YLNN--ELY-AKK--S-------TTIED-----FM---KQHGLLF-----E----NIELDKWDR---L-----------------LAGWRIN--K---R-----------L---K---------------LGE---------LSTGMLMKVKIGSVLARKAKLYLYDEPFASIDIMARSEVMKAIIS-ET-N--PD--AITI-IS-SHHLEGTEKLYS--KLWLIKD-NTL-------QTIE-T--ETYREETG-NALIDFYKEEMNK--------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 88.0927% -80 - C1 -1VPL ? A:[16-232] ----VVVKDLRKRIG--K----KE-ILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIV-----TVFGKNV----V--EE----------------P------HE--VRK---L----IS----YLPE--EAG-AYR--N-------MQGIE-----YL---RFVAGFYASSSSE----IEEMVERAT---E-----------------IAGLGEK--I---K-----------D---R---------------VST---------YSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRK-ILK-QA-S--QE--GLTILVS-SHNMLEVEFLCD--RIALIHN-GTI---------VE-T--GTVEE-------------------------------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 87.8626% -80 - C1 -4P32 LPTB_ECOLI A:[3-221] ----LTAKNLAKAYK--G----RR-VVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNI-----II--DDDDISLL--PL----------------H------AR--ARR---G----IG----YLPQ--EAS-IFR--R-------LSVYDNLMAVLQ---IRDDLSA-----E----QRE-DRANE---L-----------------MEEFHIE--HL--R-----------D---S---------------MGQS--------LSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEH-LR-D--SG--LGVL-IT-DHNVRETLAVCE--RAYIVSQ-GHL-------IAHG-T--PT----------------------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 87.3326% -76 - C1 -4QC2 ? A:[4-222] ----LTAKNLAKAYK--G----RR-VVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNI-----II--DDDDISLL--PL----------------H------AR--ARR---G----IG----YLPQ--EAS-IFR--R-------LSVYDNLMAVLQ---IRDDLSA-----E----QRE-DRANE---L-----------------MEEFHIE--HL--R-----------D---S---------------MGQS--------LSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEH-LR-D--SG--LGVL-IT-DHNVRETLAVCE--RAYIVSQ-GHL-------IAHG-T--PT----------------------------------------------------------------------------------------------------------------------------
48 HHSearch 85.2623% -87 - C1 -1VPL ? A:[16-251] ----VVVKDLRKRIG--K----KE-ILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIV-----TV--FGK----N--VV----------------EEP----HE--VRK---L----IS----YLPE--EAG-AYR--N-------MQGIE-----YL---RFVAGFY-----ASSS-SEIEEMVER---A-----------------TEIAGLGEKI---K-----------D---R---------------VST---------YSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRKILKQ-AS-Q--EG--LTIL-VS-SHNMLEVEFLCD--RIALIHN-GTI-------VETGTV--EELKERYKAQNIEEVFEEVVK---------------------------------------------------------------------------------------------------------
10 PsiBlast_PDB 84.5525% -73 - C1 -4P33 LPTB_ECOLI A:[3-221] ----LTAKNLAKAYK--G----RR-VVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNI-----II--DDDDISLL--PL----------------H------AR--ARR---G----IG----YLPQ--EAS-IFR--R-------LSVYDNLMAVLQ---IRDDLSA-----E----QRE-DRANE---L-----------------MEEFHIE--HL--R-----------D---S---------------MGQS--------LSGGERRRVEIARALAANPKFILLDQPFAGVDPISVIDIKRIIEH-LR-D--SG--LGVL-IT-DHNVRETLAVCE--RAYIVSQ-GHL-------IAHG-T--PT----------------------------------------------------------------------------------------------------------------------------
29 HHSearch 83.4322% -83 - C1 -1Z47 ? A:[14-238] ---TIEFVGVEKIYPG-G----AR-SVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDV-----WI--GGK----R--VT----------------DL-----PP--QKR---N----VG----LVFQ--NYA-LFQ--H-------MTVYD-----NV---SFGLREK-----RVPK-DEMDARVRE---L-----------------LRFMRLESYA---N-----------R---F---------------PHE---------LSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQ-VH-DE-MG--VTSV-FV-THDQEEALEVAD--RVLVLHE-GNV-------EQFGTP--EEVYEKPG----------------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 81.0326% -75 - C1 -2IHY ? A:[25-243] -------DQIGRMKQ--G----KT-ILKKISWQIAKGDKWILYGLNGAGKTTLLNILNAYEPATSGTV-----NL--FGK----MPGYS----------------A------ET--VRQ---H----IG----FVSH--SLL-EKF--QEGERVIDVVISG-----A----------------------IDDEIRNE---AHQLLK------------LVGMSAK--A---Q-----------Q---Y---------------IGY---------LSTGEKQRVMIARALMGQPQVLILDEPAAGLDFIARESLLSILDS-LS-DSYPT--LAMI-YV-THFIEEITANFS--KILLLKD-G---------QSIQ----------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 80.7725% -84 - C1 -4RVC - ? A:[8-209] --------DLSGGYT--A----QN-VLEDVTFVVDRGEMVALIGLNGAGKSTTIKHIIGLMEPRRGAI-----SI--NGY----R--LA----------------D------GPETYRR---Q----FA----YIPE--TPV-LYE--E-------LTLEE-----HL---RLAAMAY-----G----LSEAEYERRLPPL-----------------LREFRLE--R---R-----------L---SSF-------------PAH---------FSKGMKQKVMIVCAFLLEPPLYIIDEPFLGLDPLAIHALLERMNE-QK-A--KG--AGIL-LS-THILATAER-YC--DSFVILH-N-----------------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 80.5725% -88 - C1 -4WBS ? A:[40-272] ----LVVRNLKKRYG--S----RT-VVKDVSLDVKSGEVVGLLGPNGAGKTTSFYMIVGLVPLDAGEI-----DL--DGK----S--IS----------------L------LP--IHK---RASLGLS----YLPQ--EAS-VFR--K-------LSVEE-----NI---RA---VL-----E----LQVGDDGKR---LSKDAIASRTEALLDELQISHLREN--P---A-----------L---------------------S---------LSGGERRRVEIARALATNPSFILLDEPFAGVDPIAVLEIQKIVKF-LK-Q--RN--IGVL-IT-DHNVRETLGICD--HAYIISD-GSVLAAGAPGDIIE-N--ESVR--------------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 80.1721% -56 - C1 -1Z47 ? A:[19-250] --------GVEKIYP--G----GARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDV-----WI--GGK----R--VT----------------D------LP--PQK---R----NV----GLVF--QNY-A-----------------------L---FQHMTVY-----D----NVSFGLREK---R-----------------VPKDEMD--A---R-----------V---RELLRFMRLESYANRFPHE---------LSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRE-LRTFVR-QV-H--DEMGVTSV-FV-THDQEEALEVAD--RVLVLHE-GNV-------EQFG-TP-EEVYEKPG-TLFVASFIGESN---------------------------------------------------------------------------------------------------------
38 HHSearch 80.0420% -86 - C1 -3TUI METN_ECOLI C:[24-254] ---MIKLSNITKVFH--QGTRTIQ-ALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSV-----LV--DGQ----E--LT----------------TLSESELTK--ARR---Q----IG----MIFQ--HFN-LLS--S-------RTVFG-----NV---ALPLELD-----NTPK-DEVKRRVTE---L-----------------LSLVGLGDKH---D-----------S---Y---------------PSN---------LSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKD-IN-RR-LG--LTIL-LI-THEMDVVKRICD--CVAVISN-GEL-------IEQDTV--SEVFSH------------------------------------------------------------------------------------------------------------------------
53 Fugue 79.8323% -60 - C1 -1Z47 ? A:[11-355] GSMTIEFVGVEKIYP--G----GARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDV-----WI--GGK----R--VT----------------D------LP--PQKRNVG----LV----FQNY--ALF-QHMTVY-------DNVSF-----GL---REKRVPK-----D----EMD-ARVRE---L-----------------LRFMRLE--S---Y-----------ANR-F---------------PHE---------LSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQ-VH-D--EM--GVTS-VFVTHDQEEALEVAD--RVLVLHEGNVE-------QFGT-P--EEVYEKPG-TLFVASFIGESNVWTRAVQNGRIEVAGAALPVDPAVSEGSEVAVVVRPKDVELQPASEREAHAQVVRSAFKGSYSACWIRTKDGEVWEVHVPSADRHRWSPGAWVHMNVTRWFIFPR
32 HHSearch 78.7022% -87 - C1 -3FVQ FBPC_NEIG1 A:[4-236] ---ALHIGHLSKSFQ--N----TP-VLNDISLSLDPGEILFIIGASGCGKTTLLRCLAGFEQPDSGEI-----SL--SGK----T--IFSKNTN-----------L------PV--RER---R----LG----YLVQ--EGV-LFP--H-------LTVYR-----NI---AYGLGNG-----KGRT-AQERQRIEA---M-----------------LELTGISELA---G-----------R---Y---------------PHE---------LSGGQQQRAALARALAPDPELILLDEPFSALDEQLRRQIREDMIA-ALRA--NG--KSAV-FV-SHDREEALQYAD--RIAVMKQ-GRI-------LQTASP--HELYRQPA----------------------------------------------------------------------------------------------------------------------
44 HHSearch 78.5722% -86 - C1 -3GFO ECFA3_CLOP1 A:[7-236] ---ILKVEELNYNYSD-G----TH-ALKGINMNIKRGEVTAILGGNGVGKSTLFQNFNGILKPSSGRI-----LF--DNK----P--IDYSRKG-----------I------MK--LRE---S----IG----IVFQ--DPDNQLF--S-------ASVYQ-----DV---SFGAVNM-----KLPE-DEIRKRVDN---A-----------------LKRTGIEHLK---D-----------K---P---------------THC---------LSFGQKKRVAIAGVLVMEPKVLILDEPTAGLDPMGVSEIMKLLVE-MQ-KE-LG--ITII-IA-THDIDIVPLYCD--NVFVMKE-GRV-------ILQGNP--KEVFAEKE----------------------------------------------------------------------------------------------------------------------
23 PsiBlast_CBE 76.8331% -88 - C1 -2PJZ ? A:[7-205] -----VGITLSGKGY--E----RF-SLENINLEV-NGEKVIILGPNGSGKTTLLRAISGL-LPYSGNI-----FI--NG--------ME----------------V------RK--IRN---Y----IR----YSTNLPEAY--EI--G-------VTVND-----IV-------YLY-----E------ELKGLDR---D-----------------LF-LEML--K---A-----------L---K---------------LGEEILRRKLYKLSAGQSVLVRTSLALASQPEIVGLDEPFENVD-AARRHVISRYIK-EY-G--KE--GILV----THELD-MLNLYKEYKAYFLVG-NRL-------Q-------------------------------------------------------------------------------------------------------------------------------------
13 PsiBlast_PDB 76.1826% -80 - C1 -4MKI ECFA2_CALS4 B:[25-238] -----------------------V-ALKDINFSIDDEEFVGIIGHTGSGKSTLIQQLNGLLKPSKGKIYINGIDI--TDK----K--VS----------------L------KD--IRK---Q----VGLVFQYPEY--QLF---E--E-------TVFKD-----IAFGPSNLGLSE-----E----EVKERVYEA---ME----------------IVG--IS--K---E-----------LADKS---------------PFE---------LSGGQKRRVAIAGILAMRPKILILDEPTAGLDPKGKQEILNKIKEIHD-K--YK--MITI-LV-SHNMEDIARIAD--KIIVMNR-GKI-------ELIG-TPREVFRE-------------------------------------------------------------------------------------------------------------------------
35 HHSearch 74.6920% -81 - C1 -2YYZ ? A:[3-226] ---SIRVVNLKKYFG--K----VK-AVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGEI-----YF--DDV----L--VN----------------DI-----PP--KYR---E----VG----MVFQ--NYA-LYP--H-------MTVFE-----NI---AFPLRAR-----RISK-DEVEKRVVE---I-----------------ARKLLIDNLL---D-----------R---K---------------PTQ---------LSGGQQQRVALARALVKQPKVLLFDEPLSNLDANLRMIMRAEIKH-LQ-QE-LG--ITSV-YV-THDQAEAMTMAS--RIAVFNQ-GKL-------VQYGTP--DEVYDSPK----------------------------------------------------------------------------------------------------------------------
46 HHSearch 74.5720% -89 * C1 *2OLJ ? A:[24-251] ---MIDVHQLKKSFG--S----LE-VLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGEI-----II--DGI----N--LKAKDTN-----------L------NK--VRE---E----VG----MVFQ--RFN-LFP--H-------MTVLN-----NI---TLAPMKV-----RKWPREKAEAKAME---L-----------------LDKVGLKDKA---H-----------A---Y---------------PDS---------LSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQ-LA-N--EG--MTMV-VV-THEMGFAREVGD--RVLFMDG-GYI-------IEEGKP--EDLFDRPQ----------------------------------------------------------------------------------------------------------------------
47 HHSearch 73.8420% -96 - C1 -1B0U HISP_SALTY A:[7-244] ----LHVIDLHKRYG--G----HE-VLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAI-----IV--NGQ----N--INLVRDKDGQLKVADKNQL------RL--LRT---R----LT----MVFQ--HFN-LWS--H-------MTVLE-----NV---MEAPIQVLGLS-K----HDARERALK---Y-----------------LAKVGID--ERAQG-----------K---Y---------------PVH---------LSGGQQQRVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQ-LA-E--EG--KTMV-VV-THEMGFARHVSS--HVIFLHQ-GKI-------EEEGDP--EQVFGNP-----------------------------------------------------------------------------------------------------------------------
45 HHSearch 73.3417% -94 - C1 -3GD7 CFTR_HUMAN (first) A:[20-246] ----MTVKDLTAKYTEGG----NA-ILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGEI-----QI--DGV----S--WDSIT-------------L------EQ--WRK---A----FG----VIPQ--KVF-IFS----------GTFRK-----NL---DPNAAH-------------SDQEIWK---V-----------------ADEVGLRSVI---EQFPGKLDFVLVD---G---------------GCV---------LSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQ-AF----AD--CTVI-LC-EARIEAM-LECD--QFLVIEE-NKV-------RQYDSI--LELYHYPA-D--------------------------------------------------------------------------------------------------------------------