@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1964: (2016-03-30 )
MEAIKVESLTKNYHKKRAIENVDLSVNEGELYGFIGPNGAGKSTTIKVLLNFIYATSGGATILGKDVVKDSAEIKKMVGYVPSEVRYYPQMTANDIIHYAAKFHHIENATQKMNKYYEMFSIDPKKRFGEMSLGNKKKVAIVAGLITEPQLFILDEPTNGLDPLMQHYLFKEMTERNKEGMTIFLSSHNLREVQEYCTRAAFIRNGNIIAVEDIANQQMTGKVIALKGTNLPLEKLTNAGARIIEKEMGKARLIFDDDIKTILPLLQEKEITDLTITNQELEDKFMTLYEGGEIK

Atome Classification :

(21 SA) -.........10...----.----....20........30........40........50........60......----.-.---70--.----.--..----...---..80-----....-.------------...90..--......100-.....--.--..--.--110....-----..-...120.-----..--.-...--.----------130.......140.......150.......160....---...170.....-.-.-180.......190.......200.......---210-.-----------........220...-....-230........240....----...250-----------.....--....260.......270.......280.------......290...------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -MEAIKVESLTKNYH----K----KRAIENVDLSVNEGELYGFIGPNGAGKSTTIKVLLNFIYATSGGATILGKDV----V-K---D---S----A--EI----KKM---VGYV-----PSEV-R------------YYPQMTA--NDIIHYA---AKFHH--I--EN--A--T--QKMN-----KY-YEMFS-I-----DP--K-KRF--G----------EMSLGNKKKVAIVAGLITEPQLFILDEPTNGLDPLMQ---HYLFKEMTERN-K-E-GMTIFLSSHNLREVQEYCTRAAFIRNGNII---A---V-----------EDIANQQMTGKVIA-LKGT-NL-PLEKLTNAGARIIEK----EMGK-------------ARLIF--DDDIKTILPLLQEKEITDLTITNQELED------KFMTLYEGGEIK------------------------------------------
40 HHSearch 88.3134% -93 - C1 -1VPL ? A:[14-235] --GAVVVKDLRKRIG----K----KEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVFGKNV----V-E---E---P----H--EV----RKL---ISYL-----PEEA-G------------AYRNMQG--IEYLRFV---AGFYA--S--SS--SEIE--EMVE-----RA-TEIAG-L-----GEKIK-DRV--S----------TYSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNA---REVRKILKQAS-Q-E-GLTILVSSHNMLEVEFLCDRIALIHNGTIV---E---T-----------GTVEELKE--------------------------------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 85.2635% -96 - C1 -1VPL ? A:[14-225] --GAVVVKDLRKRIG----K----KEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVFGKNV----V-E---E---P----H--EV----RKL---ISYL-----PEEA-G------------AYRNMQG--IEYLRFV---AGFYA--S--SS--SEIE--EMVE-----RA-TEIAG-L-----GEKIK-DRV--S----------TYSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNA---REVRKILKQAS-Q-E-GLTILVSSHNMLEVEFLCDRIALIHNGTIV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 80.4430%-107 - C1 -4RVC - ? A:[2-232] --TLLEVKDLSGGYT----A----QNVLEDVTFVVDRGEMVALIGLNGAGKSTTIKHIIGLMEPRRGAISINGYRL----A-D---G---P----E--TY----RRQ---FAYI-----PETP-V------------LYEELTL--EEHLRLA---AMAYG--L--SE--A--EYERRLP-----PL-LREFR-L-----ER--RLSSFP-A----------HFSKGMKQKVMIVCAFLLEPPLYIIDEPFLGLDPLAI---HALLERMNEQK-A-K-GAGILLSTHILATAERYCDSFVILHNGRVK---AKGTL-----------DDIRRQ------FG-LRGA-SL------------------------------------------------------------------------------------------------------------------------------------
43 Fugue 79.8223% -72 - C1 -1OXS ? C:[1-352] -MVRIIVKNVSKVFKKG--K----VVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLV----A-S---N---G----K--LIVPPEDRK---IGMV-----FQTW-A------------LYPNLTA--FENIAFP---LTNMK--MSKEE--I--R--KRVE-----EV-AKILD-I-----HHVLN-HFP--R----------ELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMR---DSARALVKEVQ-S-RLGVTLLVVSHDPADIFAIADRVGVLVKGKLV---Q---VGKP--------EDLYDNPVSIQVAS-LIGEINE-LEGKVTNEGVVIGSL----RFPVSVSSDRAIIGIRPEDVKL--SKDVIKDDSWILVGKGKVKVIGYQGGLF------RITITPLDSEEEIFTYSDHPIHSGEEVLVYVRKDKIKVFEK-------------
11 PsiBlast_PDB 75.4826% -90 - C1 -3D31 - ? A:[2-248] ----IEIESLSRKW-----K----NFSLDNLSLKVESGEYFVILGPTGAGKTLFLELIAGFHVPDSGRILLDGKDV----T-D---L---S----P--E-----KHD---IAFV-----YQNY-S------------LFPHMNV--KKNLEFG---MRMKK--I--KD--P--K--RVLDTARDLKI-EHLLD-R-----NP--L-T----------------LSGGEQQRVALARALVTNPKILLLDEPLSALDPRTQENAREMLSVLHKKN-K----LTVLHITHDQTEARIMADRIAVVMDGKLI---Q---VGKP--------EEIFEKPVEGRVAS-FVGF-EN-VLK------GRVISA----EQGL-------------LRI--------------------------------------------------------------------------------------------
8 PsiBlast_PDB 75.2930% -91 - C1 -2IT1 - ? A:[1-215] -MVEIKLENIVKKFG----N----FTALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKIYFDEKDV----T-E---L---P----P--K-----DRN---VGLV-----FQNW-A------------LYPHMTV--YKNIAFP---LELRK--APREE--I--D--KKVR-----EV-AKMLH-I-----DKLLN-RYP--W----------QLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLR---LEVRAELKRLQ-K-ELGITTVYVTHDQAEALAMADRIAVIREGEIL---Q---V---------------------------------------------------------------------------------------------------------------------------------------------------------------------
34 HHSearch 74.6825% -97 - C1 -3GFO ECFA3_CLOP1 A:[5-233] -DYILKVEELNYNYS----DG---THALKGINMNIKRGEVTAILGGNGVGKSTLFQNFNGILKPSSGRILFDNKPI----D-Y---SRKGI----M--KL----RES---IGIV-----FQDPDN------------QLFSASV--YQDVSFG---AVNMK--L--PEDEI--R--KRVD-----NA-LKRTG-I-----EHLKD-KPT--H----------CLSFGQKKRVAIAGVLVMEPKVLILDEPTAGLDPMGV---SEIMKLLVEMQKE-L-GITIIIATHDIDIVPLYCDNVFVMKEGRVI---L---Q-----------GNPKEVFA--------------------------------------------------------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 74.2229% -91 - C1 -4U00 ? A:[5-217] ----IRIRNLHKWFG----P----LHVLKGIHLEVAPGEKLVIIGPSGSGKSTLIRTINRLEDFQEGEVVVDGLSV----K-D---D---R----ALREI----RRE---VGMV-----FQQF-N------------LFPHMTV--LENVTLAPMRVRRWP--R--EK--A--E--KKAL-----EL-LERVG-IL----DQ--A-RKYP-A----------QLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPEMV---GEVLDVMRDLA-Q-G-GMTMVVVTHEMGFAREVADRVVFMDGGQIV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24 HHSearch 74.0229% -84 - C1 -2IT1 - ? A:[1-223] -MVEIKLENIVKKFG----N----FTALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKIYFDEKDV----T-E---L--------P--PK----DRN---VGLV-----FQNW-A------------LYPHMTV--YKNIAFP---LELRK--A--PR--EEID--KKVR-----EV-AKMLH-I-----DKLLN-RYP--W----------QLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLR---LEVRAELKRLQ-KEL-GITTVYVTHDQAEALAMADRIAVIREGEIL---Q---V-----------GTPDEVYY--------------------------------------------------------------------------------------------------------------------------------------------------
28 HHSearch 73.8525%-100 - C1 -3TUI METN_ECOLI C:[23-253] --HMIKLSNITKVFH----QGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQEL----T-T---L---SESELT--KA----RRQ---IGMI-----FQHF-N------------LLSSRTV--FGNVALP---LELDN--T--PK--DEVK--RRVT-----EL-LSLVG-L-----GDKHD-SYP--S----------NLSGGQKQRVAIARALASNPKVLLCDQATSALDPATT---RSILELLKDIN-RRL-GLTILLITHEMDVVKRICDCVAVISNGELI---E---Q-----------DTVSEVFS--------------------------------------------------------------------------------------------------------------------------------------------------
46 Fugue 73.2122% -85 - C1 -3TUZ METN_ECOLI H:[23-362] --HMIKLSNITKVFHQGTRT----IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSE-S---E---L----T--KA----RRQ---IGMI-----FQHF-N------------LLSSRTV--FGNVALP---LELDN--TPKDE--V--K--RRVT-----EL-LSLVG-L-----GD--K-HDSYPS----------NLSGGQKQRVAIARALASNPKVLLCDQATSALDPATT---RSILELLKDIN-R-RLGLTILLITHEMDVVKRICDCVAVISNGELIEQDT---V-----------SEVFSHPKTPLAQK-FIQS-TL-HLDIPEDYQERLQAEPFTDCVPM-------------LRLEFTGQSVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKVEV------------------------
10 PsiBlast_PDB 73.2029% -88 - C1 -4U02 ? A:[5-217] ----IRIRNLHKWFG----P----LHVLKGIHLEVAPGEKLVIIGPSGSGKSTLIRTINRLEDFQEGEVVVDGLSV----K-D---D---R----ALREI----RRE---VGMV-----FQQF-N------------LFPHMTV--LENVTLAPMRVRRWP--R--EK--A--E--KKAL-----EL-LERVG-IL----DQ--A-RKYP-A----------QLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPEMV---GEVLDVMRDLA-Q-G-GMTMVVVTHEMGFAREVADRVVFMDGGQIV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
44 Fugue 72.2419% -76 - C1 -1Z47 ? A:[11-355] GSMTIEFVGVEKIYPG---G----ARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWI-GGKR----V-T---D---L----P--PQ----KRN---VGLV-----FQNY-A------------LFQHMTV--YDNVSFG---LREKRVPK--DE--M--D--ARVR-----EL-LRFMR-L-----ESYAN-RFP--H----------ELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIR---RELRTFVRQVH-D-EMGVTSVFVTHDQEEALEVADRVLVLHEGNVE---Q---FGTP--------EEVYEKPGTLFVASFIGES-NV-WTRAVQNGRIEVAGA----ALPV-------------DPAVS--EG--SEVAVVVRPKDVELQPASEREAHA------QVVRSAFKGSYSACWIRTKDGEVWEVHVPSADRHRWSPGAWVHMNVTRWFIFPR
35 HHSearch 71.8226% -81 - C1 -2OLJ ? A:[22-248] -LQMIDVHQLKKSFG----S----LEVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDGINL----K-AKDTN---L----N--KV----REE---VGMV-----FQRF-N------------LFPHMTV--LNNITLA---PMKVRK-W--PREKA--E--AKAM-----EL-LDKVG-L-----KDKAH-AYP--D----------SLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMV---GEVLSVMKQLA-N-E-GMTMVVVTHEMGFAREVGDRVLFMDGGYII---E---E-----------GKPEDLFD--------------------------------------------------------------------------------------------------------------------------------------------------
38 HHSearch 71.7625% -92 - C1 -1JI0 ? A:[5-228] --IVLEVQSLHVYYG----A----IHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDI----T-N---K---PA---HV-IN----RMG---IALV-----PEGR-R------------IFPELTV--YENLMMG---AYNRK--D--KEG-I--K--RDLE-----WI-FSLFPRL-----KERLK-QLG--G----------TLSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILV---SEVFEVIQKIN-Q-E-GTTILLVEQNALGALKVAHYGYVLETGQIV---L---E-----------GKASELLD--------------------------------------------------------------------------------------------------------------------------------------------------
19 PsiBlast_PDB 70.8529% -91 - C1 -4YMW - ? J:[2-215] ----IFVNDVYKNFG----S----LEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEEPTKGEVFIDGVKI----N-N---G---K----V--NI----NKVRQKVGMV-----FQHF-N------------LFPHLTA--IENITLA---PV------------K--V--KKMN-----KKEAEELA-V-----DL--L-AKV--GLLDKKDQYPIKLSGGQKQRLAIARALAMQPEVMLFDEPTSALDPEMV---KEVLNVMKQLA-N-E-GMTMVVVTHEMGFAREVGDRVIFMDDGVIV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12 PsiBlast_PDB 70.8529% -96 - C1 -1G6H LIVG_METJA A:[5-233] -MEILRTENIVKYFG----E----FKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDI----TNK---E---P----A--EL----YHY----GIVRTFQTPQPL-KEMTVLENLLIGEICPGESP--LNSLFYK---KWIPK--E--EE--M--V--EKAF-----KI-LEFLK-L-----SHLYD-RKA--G----------ELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLA---HDIFNHVLELK-A-K-GITFLIIEHRLDIVLNYIDHLYVMFNGQII---A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16 PsiBlast_PDB 70.4629% -89 - C1 -4YMT - ? J:[2-215] ----IFVNDVYKNFG----S----LEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEEPTKGEVFIDGVKI----N-N---G---K----V--NI----NKVRQKVGMV-----FQHF-N------------LFPHLTA--IENITLA---PV------------K--V--KKMN-----KKEAEELA-V-----DL--L-AKV--GLLDKKDQYPIKLSGGQKQRLAIARALAMQPEVMLFDEPTSALDPEMV---KEVLNVMKQLA-N-E-GMTMVVVTHEMGFAREVGDRVIFMDDGVIV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15 PsiBlast_PDB 70.2829% -90 - C1 -4YMS - ? J:[2-215] ----IFVNDVYKNFG----S----LEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEEPTKGEVFIDGVKI----N-N---G---K----V--NI----NKVRQKVGMV-----FQHF-N------------LFPHLTA--IENITLA---PV------------K--V--KKMN-----KKEAEELA-V-----DL--L-AKV--GLLDKKDQYPIKLSGGQKQRLAIARALAMQPEVMLFDEPTSALDPEMV---KEVLNVMKQLA-N-E-GMTMVVVTHEMGFAREVGDRVIFMDDGVIV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17 PsiBlast_PDB 69.4029% -87 - C1 -4YMU ? J:[2-215] ----IFVNDVYKNFG----S----LEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEEPTKGEVFIDGVKI----N-N---G---K----V--NI----NKVRQKVGMV-----FQHF-N------------LFPHLTA--IENITLA---PV------------K--V--KKMN-----KKEAEELA-V-----DL--L-AKV--GLLDKKDQYPIKLSGGQKQRLAIARALAMQPEVMLFDEPTSALDPEMV---KEVLNVMKQLA-N-E-GMTMVVVTHEMGFAREVGDRVIFMDDGVIV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 53.7830% 15 - C1 -4YER ? A:[6-302] ----IVVENLVKKFG----D----FEAVKGVSFSVKKGEIFAFLGPNGAGKTTTIHMLTTLLKPTSGKAWVAGHDV----L-K---E---P----R--EV----RRK---IGIV-----FQDQ-S------------LDRELTAYENMYIHGK---IYGYG--G--EK--L--K--KRIL-----EL-LEFVE-LLEFKDKP--V-KTF---------------SGGMARRLEIARSLIHEPEVLFLDEPTIGLDPHTR---AHMWEYISKMK-K-EHNMTIFLTTHYMDEAEQLADRVAIIDHGKII---A---LGTPTELKRMVGKEIIYVR-----------D-FIESCRKLPDGRLELNVE----D--------------------------------------IEEITYHKPTLND------VFLHL-------------------------------------------------