@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Wbm0358: (2015-11-30 )
MDIENNLQDLKRKFNYIERKLENPTNLSQKEFINLSKEYSELRPIIKIINEYDTLKKEILDLEEIIKDENSEYDIKELAKEEFFEKQKVLLPQVKAKLKLALLPKDEDDSRNAILEIRAGTGGEEAALFAAMLFRMYQKYAERRNWKFEPISISSTGIGGYKEASALINGTEVFARLKFESGVHRVQRVPETESSGRLHTSAATVAILPEVEEVDFKIEEKDLRIDVYRSSGPGGQSVNTTDSAVRVTHLPTEMVVIQQDEKSQHKNKAKALKVLRARLYEIERQKKEIERSTMRKSQIGSGDRSERIRTYNFPQSRITDHRINLTSHQLEQIIKEGELDEFIEVLISRNEAERLAGES

Atome Classification :

(20 SA) --------------------------.....---....10........20......-.-.30...-.....40.----.......50-...--------------.....60.---------......-.70.---.......80........-90........-----100.-......110..------.....120------------------..--------------......130---.....-...-----140.---------------------------------.------------.....150.....-----..160.......170.------....---..180-----.......------.190.---....--------------------..200.......210-----------..-.-.-...-..220......-.230.......---240---.....--------------------.---------------------.------250---.-----------------.---.-------------------------.-----.....260....-...270....-....280.-......290----------.-..--.....300.......310--------...-----....320.......330.......340.-----------......350.---.--.....-
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) --------------------------MDIEN---NLQDLKRKFNYIERKLENPTNL-S-QKEFIN-LSKEYSEL----RPIIKIINE-YDT--------------LKKEILDL---------EEIIKD-ENSE---YDIKELAKEEFFEKQKV-LLPQVKAKLK-----LALL-PKDEDDSRNAI------LEIRAGT-------------------GG--------------EEAALFAA----MLFRM-YQK-----YAER---------------------------------R------------NWKFEPISISSTG-----IGGYKEASALINGTEV------FARL---KFES------GVHRVQR------VPETE---SSGR--------------------LHTSAATVAILPE-------------VE-E-V-DFK-IEEKDLRIDVY-RSSGPGGQSVN---TTD---SAVRV--------------------T---------------------H------L-----P-----------------T---E-------------------------M-----VVIQQDEKSQHK-NKAKA-LKVL-RARLYEIE-RQKKEIER-----------S-TM--RKSQIGSGDRSERIRTYN--------FPQ-----SRITDHRINLTSHQLEQIIKEGELDEFI-----------EVLISRNEAE---R--LAGES-
26 HHSearch 90.0149% -63 - C11 -2B3T - RF1_ECOLI B:[7-354] ------------------------------A---KLEALHERHEEVQALLGDAQTI-ADQERFRA-LSREYAQL----SDVSRCFTD-WQQ--------------V------------------------------------------------------QQLQ-----VLLL-PKDPDDERNAF------LEVRAGT-------------------GG--------------DEAALFAG----DLFRM-YSR-----YAEA---------------------------------R------------RWRVEIMSASEGE-----HGGYKEIIAKISGDGV------YGRL---KFES------GGHRVQR------VPATE---SQGR--------------------IHTSACTVAVMPE-------------LP-D-AELPD-VNPADLRIDTF-RSSGAGGQHVN---TTD---SAIRI--------------------T---------------------H------L-----P-----------------T---G-------------------------I-----VVECQDERSQHK-NKAKA-LSVL-GARIHAAE-MAKRQ--------------------RRN-------SDRNRTYN--------FPQ-----GRVTDHRINLTLYRLDEVM-EGKLDMLI-----------EPIIQEHQAD---Q--LA----
1 PsiBlast_PDB 88.1051% -63 - C11 -2B3T - RF1_ECOLI B:[28-354] -----------------------------------------------------TIA-D-QERFRA-LSREYAQL----SDVSRCFTD-WQQ--------------V------------------------------------------------------QQLQ-----VLLL-PKDPDDERNAF------LEVRAGT-------------------GG--------------DEAALFAG----DLFRM-YSR-----YAEA---------------------------------R------------RWRVEIMSASEGE-----HGGYKEIIAKISGDGV------YGRL---KFES------GGHRVQR------VPATE---SQGR--------------------IHTSACTVAVMPE-------------LP-D-A-ELPDVNPADLRIDTF-RSSGAGGQHVN---TTD---SAIRI--------------------T---------------------H------L-----P-----------------T---G-------------------------I-----VVECQDERSQHK-NKAKA-LSVL-GARIHAAE-MAKRQ--------------------RRN-------SDRNRTYN--------FPQ-----GRVTDHRINLTLYRLDEVM-EGKLDMLI-----------EPIIQEHQAD---Q--LA----
30 HHSearch 85.3150% -50 * C11 *1RQ0 - RF1_THEMA A:[1-333] --------------------------------------MKEKKKEIEKLLARPDLT-P--EQMKN-YGMEYAKI----EEIENITNR-IKE--------------TQEFI-------------ELLR---EE------G--ENELEI-EKYEK-ELDQLYQELL-----FLLS----PEASDKAI------VEIRPGT-------------------GG--------------EEAALFAR----DLFRM-YTR-----YAER---------------------------------K------------GWNLEVAEIHETD-----LGGIREVVFFVKGKNA------YGIL---KYES------GVHRVQR------VPVTE---SGGR--------------------IHTSTATVAVLPE-------------IE-E-K-DIE-IRPEDLKIETF-RASG----YVN---KTE---SAVRI--------------------T---------------------H------L-----P-----------------T---G-------------------------I-----VVSCQNERSQYQ-NKQTA-LRIL-RARLYQLQ-KEQKEREI-----------S-Q------------RSEKIRTYN--------FPQ-----NRVTDHRINYTSYRLQEIL-DGDLDEII-----------SKLIEHDIEN---N--LEEVL-
3 PsiBlast_PDB 80.1956% -58 - C11 -1RQ0 - RF1_THEMA A:[69-324] -----------------------------------------------------------------------------------------------------------------------------------------------------------LDQLYQELL-----FLLS-PEASD---KAI------VEIRPGT-------------------GG--------------EEAALFAR----DLFRM-YTR-----YAER---------------------------------K------------GWNLEVAEIHETD-----LGGIREVVFFVKGKNA------YGIL---KYES------GVHRVQR------VPVTE---SGGR--------------------IHTSTATVAVLPE-------------IE-E-K-DIE-IRPEDLKIETF-RASG----YVN---KTE---SAVRI--------------------T---------------------H------L-----P-----------------T---G-------------------------I-----VVSCQNERSQYQ-NKQTA-LRIL-RARLYQLQ-KEQKEREI-----------S-Q------------RSEKIRTYN--------FPQ-----NRVTDHRINYTSYRLQEIL-DGDLDEII-----------SKLIEHDIEN---N--LEEVL-
27 HHSearch 68.4548% 25 - C11 -1ZBT - RF1_STRMU A:[2-358] ---------------------------NIYD---QLQAVEDRYEEL----------------------REEANS----RETVAVYRE-YKQ--------------VVQNIADA---------QEM------PE---LEE--MAKEEL-KNSKV-AKEEYEEKLR-----FLLL-PKDPNDDKNII------LEIRGAA-------------------GG--------------DEAALFAG----DLLNM-YQK-----YAEN---------------------------------Q------------GWKFEVMEASANG-----VGGLKEVVAMVSGQSV------YSKL---KYES------GAHRVQR------VPVTE---SQGR--------------------VHTSTATVLVMPE-------------VE-E-V-EYE-IDPKDLRVDIY-HA------------KVA---TAVRI--------------------I---------------------H------L-----P-----------------T---N-------------------------I-----KVEMQEERTQQK-NRDKA-MKII-RARVADHF-AQIAQDEQ-----------D-A------TVGTGDRSERIRTYN--------FPQ-----NRVTDHRIGLTLQKLDSIL-SGKLDEVI-----------DALILYDQTQ---K--LEELN-
6 PsiBlast_PDB 62.5336% 30 - C11 -1GQE - RF2_ECOLI A:[31-359] ---------------------------------------KERLEEVNAELEQPDVW-N-EPERAQALGKERSSL----EAVVDTLDQ-MKQ--------------GLEDVSGL---------LELAVE-ADDE---ETFNEAVAELDALEEKL-------AQLE-----FRRM-FSGEYDSADCY------LDIQAGS-------------------GG--------------TEAQDWAS----MLERM-YLR-----WAES---------------------------------R------------GFKTEIIEESEGE-----VAGIKSVTIKISGDYA------YGWL---RTET------GVHRLVR------KSPFD---SGGR--------------------RHTSFSSAFVYPE-------------VD-DDI-DIE-INPADLRIDVY-RASGAGGQHVN---RTE---SAVRI--------------------T---------------------H------I-----P-----------------T---G-------------------------I-----VTQCQNDRSQHK-NKDQA-MKQM-KAKLYEVE-MQKKNAEK-----------Q-AMEDNKSDIGWG---SQIRSYV--------LDD-----SRIKDLRTGVETRNTQAVL-DGSLDQFI-----------EASLKAGL--------------
28 HHSearch 61.9536% 27 - C11 -1GQE - RF2_ECOLI A:[25-363] ------------------------------L---DYDAKKERLEEVNAELEQPDVW-NEPERAQA-LGKERSSL----EAVVDTLDQ-MKQ--------------GLEDVSGL---------LELAVEADDEE---TFN--EAVAEL-DALEE-KLAQLEFR---------RM-FSGEYDSADCY------LDIQAGS-------------------GG--------------TEAQDWAS----MLERM-YLR-----WAES---------------------------------R------------GFKTEIIEESEGE-----VAGIKSVTIKISGDYA------YGWL---RTET------GVHRLVR------KSPFD---SGGR--------------------RHTSFSSAFVYPE-------------VDDD-I-DIE-INPADLRIDVY-RASGAGGQHVN---RTE---SAVRI--------------------T---------------------H------I-----P-----------------T---G-------------------------I-----VTQCQNDRSQHK-NKDQA-MKQM-KAKLYEVE-MQKKNAEK-----------Q-AM--E-DNKSDIGWGSQIRSYV--------LDD-----SRIKDLRTGVETRNTQAVL-DGSLDQFI-----------EASLKAGL--------------
38 Fugue 59.2234% 29 - C11 -1GQE - RF2_ECOLI A:[4-365] ---------INPVNNRIQDLTERSDVLRGYL---DYDAKKERLEEVNAELEQPDVWNE-PERAQA-LGKERSSL----EAVVDTLDQMKQG--------------LEDVSGLL---------ELAVEA-DD-----EETFNEAVAELDALEEK-LAQLEFR-----------RMFSGEYDSADCY------LDIQAGS-------------------GG--------------TEAQDWASM---L--ERMYLR-----WAES---------------------------------R------------GFKTEIIEESEGE-----VAGIKSVTIKISGDYA------YGWL---RTET------GVHRLVR------KSPFD---SGGR--------------------RHTSFSSAFVYPE-------------VD-DDI-DIE-INPADLRIDVY-RASGAGGQHVN---RTE---SAVRI--------------------T---------------------H------I-----P-----------------T---G-------------------------I-----VTQCQNDRSQHK-NKDQAMKQ--MKAKLYEVEMQKKNAEKQ-----------AMED--NKSDIGWGS---QIRSYV--------LDD-----SRIKDLRTGVETRNTQAVL-DGSLDQFI-----------EASLKAGL--------------
2 PsiBlast_PDB 52.2256% 154 - C- -2FVO - RF1_THEMA A:[69-324] -----------------------------------------------------------------------------------------------------------------------------------------------------------LDQLYQELL-----FLLS-PEASD---KAI------VEIRPGT-------------------GG--------------EEAALFAR----DLFRM-YTR-----YAER---------------------------------K------------GWNLEVAEIHETD-----LGGIREVVFFVKGKNA------YGIL---KYES------GVHRVQR------VPVTE---SGGR--------------------IHTSTATVAVLPE-------------IE-E-K-DIE-IRPEDLKIETF-RASG------------E---SAVRI--------------------T---------------------H------L-----P-----------------T---G-------------------------I-----VVSCQNERSQYQ-NKQTA-LRIL-RARLYQLQ-KEQKEREI-----------S-Q------------RSEKIRTYN--------FPQ-----NRVTDHRINYTSYRLQEIL-DGDLDEII-----------SKLIEHDIEN---N--LEEVL-
35 HHSearch 48.6832% -36 - C11 -2JY9 - ? A:[7-102] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVS-IADNELEITAI-RAQGAGGQHVN---KTS---SAIHL--------------------RFDIRASGLPEYYKQRLLTASHH------L-----I-----------------SDDGV-------------------------I-----IIKAQEFRSQEL-NREAA-IARL-VAVIKELT-AEQKSRRA-----------T-RP--TRASKERRLSSKAQKSSV--------KAL-----RGKVRRPLDLEHHHHHH--------------------------------------------
4 PsiBlast_PDB 48.0937% 199 - C- -1MI6 - RF2_ECOLI A:[31-359] ---------------------------------------KERLEEVNAELEQPDVW-N-EPERAQALGKERSSL----EAVVDTLDQ-MKQ--------------GLEDVSGL---------LELAVE-ADDE---ETFNEAVAELDALEEKL-------AQLE-----FRRM-FSGEYDSADCY------LDIQAGS-------------------GG--------------TEAQDWAS----MLERM-YLR-----WAES---------------------------------R------------GFKTEIIEESEGE-----VAGIKSVTIKISGDYA------YGWL---RTET------GVHRLVR------KSPFD---SGGR--------------------RHTSFSSAFVYPE-------------VD-DDI-DIE-INPADLRIDVY-RASGAGGQHVN---RTE---SAVRI--------------------T---------------------H------I-----P-----------------T---G-------------------------I-----VTQCQNDRSQHK-NKDQA-MKQM-KAKLYEVE-MQKKNAEK-----------Q-AMEDNKSDIGWG---SQIRSYV--------LDD-----SRIKDLRTGVETRNTQAVL-DGSLDQFI-----------EASLKAGL--------------
5 PsiBlast_PDB 47.7137% 199 - C- -1ML5 RF2_ECOLI Z:[31-359] ---------------------------------------KERLEEVNAELEQPDVW-N-EPERAQALGKERSSL----EAVVDTLDQ-MKQ--------------GLEDVSGL---------LELAVE-ADDE---ETFNEAVAELDALEEKL-------AQLE-----FRRM-FSGEYDSADCY------LDIQAGS-------------------GG--------------TEAQDWAS----MLERM-YLR-----WAES---------------------------------R------------GFKTEIIEESEGE-----VAGIKSVTIKISGDYA------YGWL---RTET------GVHRLVR------KSPFD---SGGR--------------------RHTSFSSAFVYPE-------------VD-DDI-DIE-INPADLRIDVY-RTSGAGGQHVN---RTE---SAVRI--------------------T---------------------H------I-----P-----------------T---G-------------------------I-----VTQCQNDRSQHK-NKDQA-MKQM-KAKLYELE-MQKKNAEK-----------Q-AMEDNKSDIGWG---SQIRSYV--------LDD-----SRIKDLRTGVETRNTQAVL-DGSLDQFI-----------EASLKAGL--------------
32 HHSearch 45.8027% -26 - C11 -2JVA - ? A:[7-101] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NVH-LPDAEIELTAI-RAQGAGGQNVN---KVS---SAMHL--------------------R---------------------FDINASSL-----PPFYKERLLALNDSRITSD---GV------------------------I-----VLKAQQYRTQEQ-NRADA-LLRL-SELIVNAA-KLEHHHHH-----------H----------------------------------------------------------------------------------------------------
45 Fugue 43.0413% 16 - C4 -1CB7 GLME_CLOCO B:[1-483] --------------------------MELKNKKWTDEEFHKQREEVLQQWPTGKEV-D-LQEAVD-YLKKIPAE----KNFAEKLVL-AKKKGITMAQPRAGVALLDEHIELL---------RYLQDE-GGADFLPSTIDAYTRQNRYDECEN-GIKESEKAGRSLLNGFPGV-NFGVKGCRKVLEAVNLPLQARHGTPDSRLLAEIIHAGGWTSNEGGGISYNVPYAKNVTIEKSLLDWQ----YCDRL-VGF-----YEEQGVHINREPFGPLTGTLVPPSMSNAVGITEALLAA------------EQGVKNITVGYGE-----CGNMIQDIAALRCLEE------QTNE---YLKAYGYNDVFVTTVFHQWMGGFPQDES---KAFG--------------------VIVTATTIAALAG-------------AT-K-V-IVK-TPHEAIGIPTK-EANAAGIKATK---MAL---NMLEG--------------------Q---------------------R------M-----P-----------------M---S-------------------------K-----ELETEMAVIKAE-TKCIL-DKMF-ELGKGDLA-IGTVKAFETGVMDIPFGPSK-YN--AGKMMPVRDNLGCVRYLE--------FGN-----VPFTEEIKNYNRERLQERAKFEGRDVSF-----------QMVIDDIFAVGKGR--LIGRPE
40 Fugue 43.0219% 5 - C7 -3LRV PRP19_YEAST A:[11-343] ----------------------------------------------APKWPILKNL-E-LLQAQN-YSRN-------------------------------------------------------IKT--------FPYKELNKSMYYDKWVC-MCRCEDGALH-----FTQL-KDSKTITTITT------PNPR--T-------------------GG--------------EHPAIISRGPCNRLLLL-YPGNQITILDSK---------------------------------T------------NKVLREIEVDSANEIIYMYGHNTEYFIWADNRGT------IGFQ---SYED------DSQYIVH------SAKSDVEYSSGV--------------------LHKDSLLLALY----------------------------SPDGILDVY-NLSSPDQASSRFPVDEE---AKIKE--------------------V---------------------K------F-----A-----------------D---NGY-----------------------W-----MVVECDQTVVCF-DLRKD-VGTL-AYPTYTIG-TVTYDIDD-----------S-----GKNMIAYSNESNSLTIYK--------FDKKTKNWTKDEESALCLADFTDMDVVCGD--GGIA-----------AILKTNDSFN---I--VALTP-
7 PsiBlast_PDB 41.9832% -28 - C11 -2RSM - CL065_MOUSE A:[43-104] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LNESELEEQFV-KGHGPGGQATN---KTS---NCVVL--------------------K---------------------H------V-----P-----------------S---G-------------------------I-----VVKCHQTRSVDQ-NRKIA-RKVL-QEKVDVFY-NSGPSSG-----------------------------------------------------------------------------------------------------------------
47 Fugue 41.9418% -2 - C5 -4TWA SYP_PLAF7 A:[3-497] MAITSKKIENFSDWYTQVIVKSELIEYYDIS---GCYILRPAAYYIWECVQAFFNK-E-IKK-LN-VENSYFPLFVTKNKLEKEKNH-IEG--------------FSPEVAWVTKYGDSNLPEEIAIR-PTSE---TIMYSVFPKWIRSYRDLPLKLNQWNTVV-----RWEF-KQPTPFIRTRE------FLWQEGH-------------------TAHKNE----------EEAVKLVF----DILDL-YRR-----WYEE---------------------------------YLAVPIIKGIKSEGEKFGGANFTSTA-----EAFISENGRAIQAATSHYLGTNFAKMFKIEFED------ENEVKQY------VHQTS---WGCTTRSIGIMIMTHGDDKGLVLPPNVSKYKVVIVPIFYKTTDENAIHSYCK-D-I-EKI-LKNAQINCVYDDRASYSPGYKFN---HWELRGIPIRI--------------------E---------------------V------G-----P-----------------K---D-------------------------LQNNSCVIVRRDNNEKCNVKKESV-LLET-QQMLVDIH-KNLFLKAK-----------K-KL--DDSIVQVTSFSEVMNALNKKKMVLAPWCE-----DIATEEEIKKETQRLSLTLSGAMKPLCIPLDQPPMPPNMKCFWSGKPAK---RWCLFGRSY
31 HHSearch 41.0925% -29 - C11 -2RSM - CL065_MOUSE A:[4-110] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---SSGK------WGLRLQE------KPALL---FPG---------------------MAASTVQVAGRKD-------------YP---A-LLP-LNESELEEQFV-KGHGPGGQATN---KTS---NCVVL--------------------K---------------------H------V-----P-----------------S---G-------------------------I-----VVKCHQTRSVDQ-NRKIA-RKVL-QEKVDVFY-NSGPSSG-----------------------------------------------------------------------------------------------------------------
39 Fugue 40.9725% 6 - C11 -1J26 - ICT1_MOUSE A:[1-112] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGEH-------------AK-Q-A-SSY-IPLDRLSISYC-RSSGPGGQNVN---KVN---SKAEV--------------------R---------------------F------H-----L-----------------A---SADWIEEPVRQKIALTHKNKINKAGEL-----VLTSESSRYQFR-NLAEC-LQKI-RDMIAEAS-GPSSG-------------------------------------------------------------------------------------------------------------------
34 HHSearch 40.8835% 12 - C11 -1J26 - ICT1_MOUSE A:[13-108] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-SSY-IPLDRLSISYC-RSSGPGGQNVN---KVN---SKAEVRFHLASADWIEEPVRQKIALT---------------------H------KNKINKA-----------------G---E-------------------------L-----VLTSESSRYQFR-NLAEC-LQKI-RDMIAEAS-GPSSG-------------------------------------------------------------------------------------------------------------------