@TOME V2.3
(Nov 2016)

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3D Common Core:

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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : jhp_1322: (2015-12-22 )
MVVAKKSLGQHFLMDESFLDRIVNALPPLNSLRLIEIGVGLGDLTLKLLDRYPLKTYEIDSNLCEKMRARLRAEKKPFQLELVEKDALFLKEEEPYFLISNLPYYIATRLVLNALKDPKCRGLLVMTQKEVALKFCAKDSQNALSVLAHTIGNATLLFDVPPSAFSPPPKVFSSVFEVIKEPLKEKALASLAQAPFFEEALQKGFETLEDFLKACFSSPRKTLSNNLKKSVSYKEKLDKVLDFLALENQPTSVRASEVKDYLKLLKSVLKG

Atome Classification :

(20 SA) .........10........20........30........40........50.-----.--..----..--..60........70.......---.80.......---.-90------.-------.------..---...--..--100.......110.------...-.-.-.-120.---..-....130......--.140--.---.---......150.---...---...160.......170.......----180.......190......--.200.......210.....----..220.......230..---------------------.--------------------....240......-----..250.......--..--260.......270----
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MVVAKKSLGQHFLMDESFLDRIVNALPPLNSLRLIEIGVGLGDLTLKLLDRY-----P--LK----TY--EIDSNLCEKMRARLRAEKKPF---QLELVEKDAL---F-L-------K-------E------EE---PYF--LI--SNLPYYIATRLVLN------ALK-D-P-K-CRGL---LV-MTQKEVALKFCAK--DSQ---N---A---LSVLAHTIGN---ATL---LFDVPPSAFSPPPKVFSSVFEVI----KEPLKEKALASLAQAPFFE--EALQKGFETLEDFLKACFS----SPRKTLSNNLKKSVSYK---------------------E--------------------KLDKVL-DFLALE-----NQP--TSVRASE--VK--DYLKLLKSVLKG-----
22 PsiBlast_CBE 91.8833%-110 - C1 -3FUX RSMA_THET8 B:[21-268] ---ADKRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLE-A-----G--AE----VT--AIEKDL--RLRPVLEETLSGL---PVRLVFQDAL---L-Y-------P-------W------EEVPQGSL--LV--ANLPYHIATPLVTR------LLK-T-G-R-FARL---VF-LVQKEVAERMTAR--PKT---P---A---YGVLTLRVAHHAVAER---LFDLPPGAFFPPPKVWSSLVRLT----PT-------GALDDPGLFR--------------LVEAAFG----KRRKTLLNALAAAGYPK---------------------A--------------------RVEEAL-RALGL--------P--PRVRAEE--LDL-EAFRRLREGLE------
21 PsiBlast_CBE 91.4033%-114 - C1 -3FUX RSMA_THET8 C:[21-268] ---ADKRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLE-A-----G--AE----VT--AIEKDL--RLRPVLEETLSGL---PVRLVFQDAL---L-Y-------P-------W------EEVPQGSL--LV--ANLPYHIATPLVTR------LLK-T-G-R-FARL---VF-LVQKEVAERMTAR--PKT---P---A---YGVLTLRVAHHAVAER---LFDLPPGAFFPPPKVWSSLVRLT----PT-------GALDDPGLFR--------------LVEAAFG----KRRKTLLNALAAAGYPK---------------------A--------------------RVEEAL-RALGL--------P--PRVRAEE--LDL-EAFRRLREGLE------
1 PsiBlast_PDB 90.9333%-113 - C1 -3FUU RSMA_THET8 A:[21-268] ---ADKRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLE-A-----G--AE----VT--AIEKDL--RLRPVLEETLSGL---PVRLVFQDAL---L-Y-------P-------W------EEVPQGSL--LV--ANLPYHIATPLVTR------LLK-T-G-R-FARL---VF-LVQKEVAERMTAR--PKT---P---A---YGVLTLRVAHHAVAER---LFDLPPGAFFPPPKVWSSLVRLT----PT-------GALDDPGLFR--------------LVEAAFG----KRRKTLLNALAAAGYPK---------------------A--------------------RVEEAL-RALGL--------P--PRVRAEE--LDL-EAFRRLREGLE------
3 PsiBlast_PDB 90.1233%-110 - C1 -3FUX RSMA_THET8 A:[21-268] ---ADKRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLE-A-----G--AE----VT--AIEKDL--RLRPVLEETLSGL---PVRLVFQDAL---L-Y-------P-------W------EEVPQGSL--LV--ANLPYHIATPLVTR------LLK-T-G-R-FARL---VF-LVQKEVAERMTAR--PKT---P---A---YGVLTLRVAHHAVAER---LFDLPPGAFFPPPKVWSSLVRLT----PT-------GALDDPGLFR--------------LVEAAFG----KRRKTLLNALAAAGYPK---------------------A--------------------RVEEAL-RALGL--------P--PRVRAEE--LDL-EAFRRLREGLE------
2 PsiBlast_PDB 89.6933%-111 - C1 -3FUW RSMA_THET8 A:[21-268] ---ADKRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLE-A-----G--AE----VT--AIEKDL--RLRPVLEETLSGL---PVRLVFQDAL---L-Y-------P-------W------EEVPQGSL--LV--ANLPYHIATPLVTR------LLK-T-G-R-FARL---VF-LVQKEVAERMTAR--PKT---P---A---YGVLTLRVAHHAVAER---LFDLPPGAFFPPPKVWSSLVRLT----PT-------GALDDPGLFR--------------LVEAAFG----KRRKTLLNALAAAGYPK---------------------A--------------------RVEEAL-RALGL--------P--PRVRAEE--LDL-EAFRRLREGLE------
7 PsiBlast_PDB 84.2030%-110 - C1 -3UZU RSMA_BURPS A:[18-272] -----KRFGQNFLVDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSP--LH----AV--ELDRDLIGRLEQRFGE--------LLELHAGDAL---T-F-------DFGSIARPG------DE---PSLR-II--GNLPYNISSPLLFH------LMSFA-P-V-VIDQ---HF-MLQNEVVERMVAE--PGT---K---A---FSRLSVMLQY---RYVMDKLIDVPPESFQPPPKVDSAIVRMI------PHAPHELPAVDPA--------------VLGEVVTAAFS----QRRKMLRNTLG---GYR---------------------D--------------------LVD--F-DALGFD----------LARRAEDIGVD--EYVRVAQAVASA-----
26 HHSearch 83.4029%-105 - C1 -2H1R - ? A:[2-270] ----------HLLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLA-----KK-VI----TI--DIDSRMISEVKKRCLYEG-YN---NLEV----AI---KTV-------F--------------PK---FDV--CT--ANIPYKISSPLIFK------LIS-H-RPL-FKCA---VL-MFQKEFAERMLAN--VGD---SNYSR---LTINVKLFCK---VTK---VCNVNRSSFNPPPKVDSVIVKLI----PKESSF------------------LTNFDEWDNLLRICFS----RKRKTLHAIFKRNAVLN---------------------MLEHNYKNWCTLNKQVPVNFPFKKYCL-DVLEHL-----DM---CEKRSIN--LDENDFLKLLLEFNKK-----
25 HHSearch 80.4526% -99 - C1 -1ZQ9 DIM1_HUMAN A:[8-279] ---------QHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKA-----KK-VV----AC--ELDPRLVAELHKRVQGTPVAS---KLQVLVGDVL---KTD-------L--------------PF---FDT--CV--ANLPYQISSPFVFK------LLL-H-RPF-FRCA---IL-MFQREFALRLVAK--PGD---KLYCR---LSINTQLLAR---VDH---LMKVGKNNFRPPPKVESSVVRIE----PKNPPP------------------PINFQEWDGLVRITFV----RKNKTLSAAFKSSAVQQLLEKNYRIHCSVHNIIIPEDFS--------------------IADKIQ-QILTST-----GFS---DKRARS--MDIDDFIRLLHGFNAE-----
31 HHSearch 77.7931% -97 * C1 *3FTD - RSMA_AQUAE A:[7-245] ------SFGQHLLVSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPL----KK-LY----VI--ELDREMVENLKSIG-----DE---RLEVINEDAS---KFP-------F-------CSL----GK---ELK--VV--GNLPYNVASLIIEN------TVY-N-KDC-VPLA---VF-MVQKEVAEKLQGKK-DTG-------W---LSVFVRTFYD---VNY---VMTVPPRFFVPPPKVQSAVIKLV----KNEKFP------------------VKDLKNYKKFLTKIFQ----NRRKVLRKKIPE------------------------------------------------------ELLKEA-----GIN--PDARVEQ--LSLEDFFKLYRLIEDS-----
29 HHSearch 75.7129% -98 - C1 -1QYR - RSMA_ECOLI A:[17-266] ---------QNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERL-----DQ-LT----VI--ELDRDLAARLQTHPF---LGP---KLTIYQQDAM---TFN-------F-------GELAEKMGQ---PLR--VF--GNLPYNISTPLMFH------LFS-Y-TDA-IADM---HF-MLQKEVVNRLVAG--PNS---KAYGR---LSVMAQYYCN---VIP---VLEVPPSAFTPPPKVDSAVVRLV----PHATMP----------------HPVKDVRVLSRITTEAFN----QRRKTIRNSLGNLFSV--------------------------------------------------EVLTGM-----GID--PAMRAEN--ISVAQYCQMANYLAEN-----
10 PsiBlast_PDB 73.8329%-114 - C1 -4ADV - RSMA_ECOLI V:[17-229] ---------QNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLD----Q--LT----VI--ELDRDLAARL------QTHPFLGPKLTIYQQDAM---T-FNFGELAEK-------M------GQ---PLR--VF--GNLPYNISTPLMFHLFSYTDAIA-D--------M---HF-MLQKEVVNRLVAG--PNS---K---AYGRLSVMAQYYCN---VIP---VLEVPPSAFTPPPKVDSAVVRLV----PHATMPHPV----------------KDVRVLSRITTEAFN----QRRKTIRNSLGNLFSVE---------------------V--------------------LTGMGI-DPAMRA-----ENI--SVAQYCQ--MA--NYLAENA----------
11 PsiBlast_PDB 73.6731%-107 - C1 -2H1R - ? A:[2-209] ----------HLLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLL--------P--LAKKVITI--DIDSRMISEVKKRCLYEGYN----NLEV----A------I-------K-------T------VF---PKF--DVCTANIPYKISSPLIFK------LIS-HRP-L-FKCA---VL-MFQKEFAERMLANVGDSN---Y---SR--LTINVKLFCK---VTK---VCNVNRSSFNPPPKVDSVIVKLI----PK----------------E--SSFLTNFDEWDNLLRICFS----RKRKTLHAIFKRNAVLN---------------------M--------------------LEHNYK-NWCTLN-----KQV--PVNFPFK--KY--CLDVLEHLDMCE-----
48 Fugue 73.4922% -89 - C1 -1ZQ9 DIM1_HUMAN A:[8-285] ---------QHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAK----K--VV----AC--ELDPRLVAELHKRVQGTPVAS---KLQVLVGDVL---K-T-------D-------L------PF---FDT--CV--ANLPYQISSPFVFK------LLL-HRP-F-FRCA---IL-MFQREFALRLVAK--PGD---KLYCR---LSINTQLLAR---VDH---LMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKN----YRIHCSVHNIIIPEDFS---------------------I--------------------ADKIQQ-ILTSTG-----FSD--KRARSMD--ID--DFIRLLHGFNAEGIHFS
27 HHSearch 73.4226% -90 - C1 -3GRU RSMA_METJA A:[30-287] ---------QCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNA-----KK-VY----VI--EIDKSLEPYANKLKE---LYN---NIEIIWGDAL---KVD-------L-------NK-----LD---FNK--VV--ANLPYQISSPITFK------LIK-R---G-FDLA---VL-MYQYEFAKRMVAA--AGT---KDYGR---LSVAVQSRAD---VEI---VAKVPPSAFYPKPKVYSAIVKIK----PNKGKY-----------------HIENENFFDDFLRAIFQ----HRNKSVRKALIDSSKEL---------------------NY-------------------NKDEMK-KILEDFLNTNSEIKNLINEKVFK--LSVKDIVNLSNEFYRF-----
9 PsiBlast_PDB 73.3029%-114 - C1 -1QYR - RSMA_ECOLI A:[17-229] ---------QNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLD----Q--LT----VI--ELDRDLAARL------QTHPFLGPKLTIYQQDAM---T-FNFGELAEK-------M------GQ---PLR--VF--GNLPYNISTPLMFHLFSYTDAIA-D--------M---HF-MLQKEVVNRLVAG--PNS---K---AYGRLSVMAQYYCN---VIP---VLEVPPSAFTPPPKVDSAVVRLV----PHATMPHPV----------------KDVRVLSRITTEAFN----QRRKTIRNSLGNLFSVE---------------------V--------------------LTGMGI-DPAMRA-----ENI--SVAQYCQ--MA--NYLAENA----------
5 PsiBlast_PDB 71.5537%-131 - C1 -4JXJ RSMA_RICBR A:[31-205] ----------NFIFDGSLCDKIVRASGLEENSNVLEIGPGTGGLTRSILHKN-----PKLLT----VI--ETDER-CIPLLNEIK-QYHP----NLNIIKQDAL---K-L-------KLSDL---N------TN---KIT--II--SNLPYHIGTELVIR------WLK-E-S-SLVASM---TL-MLQKEVVERICAK--PST---K---AYGRLSVICSLIAT---VEK---CFDVAPTAFYPPPKVYSAIVKLT----PLENIPNSDLISKVELITK--MAFAGRRKMIKSSLKNLAP----NISELLAKLNISDNCRA---------------------E--------------------NLTPND-YLSLAS-----LI---------------------------------
13 PsiBlast_PDB 68.6335%-116 - C1 -3FTC - RSMA_AQUAE A:[12-181] -----------LLVSEGVLKKIAEELNIEEGNTVVEVGGGTGNLT-KVLLQH-----P--LKKLY-VI--ELDREMVENLKS-IGDER-------LEVINEDASKFPF-C-------S-------L------GK---ELK--VV--GNLPYNVASLIIEN------TVY-N-K-D-CVPL---AVFMVQKEVAEKLQGK--KDT---G---W---LSVFVRTFYD---VNY---VMTVPPRFFVPPPKVQSAVIKLV----KNEKFPVKDLKNYKKFLTK--IFQNRRKVLRKKIPEELLK----EAGINPDARVEQLSLED---------------------F--------------------FKLYRL-IEDS------------------------------------------
18 PsiBlast_PDB 68.5530%-102 - C1 -3GRU RSMA_METJA A:[30-256] ---------QCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELA-KN-----A--KK----VYVIEIDKSL-EPYANKLKELYN-----NIEIIWGDAL---K-V-------D-------L------NK---LDFNKVV--ANLPYQISSPITFK------LIK--------RGFDLAVL-MYQYEFAKRMVAA--AGTKDYG---R---LSVAVQSRAD---VEI---VAKVPPSAFYPKPKVYSAIVKI------KPNKGK--YHIENENFF-------------DDFLRAIFQHRNKSVRKALIDSSKELNYNK---------------------D--------------------EMKKILEDFLNTN-----SEI--KNLINEK--VF--KLSVKDIVNLSN-----
8 PsiBlast_PDB 68.4029%-111 - C1 -3TPZ RSMA_ECOLI A:[15-229] -------FGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLD----Q--LT----VI--ELDRDLAARL------QTHPFLGPKLTIYQQDAM---T-FNFGELAEK-------M------GQ---PLR--VF--GNPPYNISTPLMFHLFSYTDAIA-D--------M---HF-MLQKEVVNRLVAG--PNS---K---AYGRLSVMAQYYCN---VIP---VLEVPPSAFTPPPKVDSAVVRLV----PHATMPHPV----------------KDVRVLSRITTEAFN----QRRKTIRNSLGNLFSVE---------------------V--------------------LTGMGI-DPAMRA-----ENI--SVAQYCQ--MA--NYLAEN-----------
20 PsiBlast_PDB 68.3630%-102 - C1 -3GRY RSMA_METJA A:[30-256] ---------QCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELA-KN-----A--KK----VYVIEIDKSL-EPYANKLKELYN-----NIEIIWGDAL---K-V-------D-------L------NK---LDFNKVV--ANLPYQISSPITFK------LIK--------RGFDLAVL-MYQYEFAKRMVAA--AGTKDYG---R---LSVAVQSRAD---VEI---VAKVPPSAFYPKPKVYSAIVKI------KPNKGK--YHIENENFF-------------DDFLRAIFQHRNKSVRKALIDSSKELNYNK---------------------D--------------------EMKKILEDFLNTN-----SEI--KNLINEK--VF--KLSVKDIVNLSN-----