@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0144: (2016-03-12 )
MEEQEIIEKVEILPNNFSENDSIYISQENIKNLVLFSKENQTVLELLITPFLICVNSGLKYELHYYEISTEISKNDTEIIGFPFGNKLPKEITDNISPKLFVRREDYSAFENFLSQYFNAMKSMGFADDKQAIGMIEHGATLFYEVL

Atome Classification :

(20 SA) -----------------------------------------------------------------------------------------------------......------...10.......-.20....----....30......----------.---------.------40........--50-----------...--......---60-.....-....70........80-.-..---------.--....90.-..-----.....100.--......110----------------.......120.......130.-....----.-.140.....----------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -----------------------------------------------------------------------------------------------------MEEQEI------IEKVEILPNNFS-ENDSIYI----SQENIKNLVLFS----------K---------E------NQTVLELLIT--P------------FLI--CVNSGL---K--YELHY-YEISTEISKNDTEIIG-F-PF---------G--NKLPKEI-TD-----NISPKLFVR--REDYSAFEN----------------FLSQYFNAMKSMGFADDKQAI-GMIE----H-GATLFYEVL----------------------------------------------------------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 81.6722% -33 - C3 -4ACL ? A:[39-172] ---------------------------------------------------------------------------------------------------------------------EIIEDNDN-DNEKISY----HRNNIRKSIFFL----------Q---------EELLEKYSETVCKYIVF--P------------LLA--YVDEKL---M--LLREK-SASNISWSLLQLEYYD-R-KD---------G--GEYVFEI-TDNILSENIYPQICYQ--TISLILHND----------------FYGKYYDNIYNHSFLAYKKEI------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
33 Fugue 80.9921% -63 - C3 -4R33 ? A:[35-418] GDFVLPELEDVRAEAATVDTRAVLALAEGEEPAESRAAVALALWEDRSIGTAELQAAAEARCGARRPRLHTFVPLYTTNYCDSECKMCSMRKGNHRLDRKFSGRKEI------TEQLEILYHH----------------EGVRGVGFLT----------G---------E------YEDKHTRLAS--A------------FRIGWAIRTAL---DLGFERVY-FNIGS-MEQDEIDVLG-E-WI---------G--RE-------D-----PVTMCVFQE--SYDRETYRR----------------FMGK-----TSVGVPKAD------FD----R-RVVSFDRWLDAGYRYVNPGVLVGLHDDLSAELVSLVAHGDHLRSRGATADLSVPRMRPAMKSRDTTRVGDDDYLRLMSVVAFTCPEQRLVLTTREPQEFQDVALGLAGVISPGSPDVAPYRAGCEARNDEKSSQFLVADLRRPRHILGRIEASGTPVDHFVNPAGEASR
10 PsiBlast_CBE 66.4933% -51 - C3 -2B4G PYRD_TRYB2 C:[107-171] ---------------------------------------------------------------------------------------------------------------------------------SVEE----SVEMVKKLVPIT----------K---------E------KGTILELNLS--------------------CPNVPG---K--PQVGYDFDTTRTYLQKVSEAYG-L-PF---------G--VKMP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9 PsiBlast_CBE 65.9633% -54 - C3 -2B4G PYRD_TRYB2 D:[107-171] ---------------------------------------------------------------------------------------------------------------------------------SVEE----SVEMVKKLVPIT----------K---------E------KGTILELNLS--------------------CPNVPG---K--PQVGYDFDTTRTYLQKVSEAYG-L-PF---------G--VKMP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 65.7233% -50 - C3 -2B4G PYRD_TRYB2 A:[107-171] ---------------------------------------------------------------------------------------------------------------------------------SVEE----SVEMVKKLVPIT----------K---------E------KGTILELNLS--------------------CPNVPG---K--PQVGYDFDTTRTYLQKVSEAYG-L-PF---------G--VKMP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11 PsiBlast_CBE 65.4533% -46 - C3 -2B4G PYRD_TRYB2 B:[107-171] ---------------------------------------------------------------------------------------------------------------------------------SVEE----SVEMVKKLVPIT----------K---------E------KGTILELNLS--------------------CPNVPG---K--PQVGYDFDTTRTYLQKVSEAYG-L-PF---------G--VKMP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35 Fugue 61.9618% -38 - C3 -4TYZ ? A:[1-109] -----------------------------------------------------------------------------------------------------NIEGVF------RKSFPDLAGE--------------TLLDSFNCAWVE----------G---------S------ALKQGYLFIT--P------------HWL--CFQSTLAAAH--FSIEY-DEIKDIIKSKSVKM-------------------FENAIEV-KT-----HLNDTIFLTNFLQRDQAYSA----------------LMSQWLK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
34 Fugue 58.6512% -34 - C3 -3TL4 - SYQ_YEAST X:[2-187] -----------------------------------------------------------------------------------------------------SSVEEL------TQLFSQVGFEDK-KVKEIVK----NKKVSDSLYKLIKETPSDYQWNK---------S------TRALVHNLAS--FVKGTDLPKSELIVNG--IINGDL---K--TSLQV-DAAFKYVKANGEASTKMGMNENSGVGIEITE--DQVRNYVMQY-----IQENKERIL--TERYKLVPG----------------IFADVKNL-KELKWADPRSFK-PIID----Q-EVLKLLGPKDERDLI----------------------------------------------------------------------------------------------------------------------------------------------------------
40 Fugue 57.8213% -48 - C2 -3HHC IFNL3_HUMAN A:[34-196] ------------------------------------------------------------------------------------------------------ARGCH------IAQFKSL--SPQ-ELQAFKR----AKDALEESLLLK----------DCKCRSRLFPR------TWDLRQLQVR--E------------RPV--ALEAEL---A--LTLKV-LEATADTDPALGDVLD-Q-PL---------HTLHHILSQL-RA-----CIQ----------------G----------------RLHHWLHRLQE---APKKESP-GCLE----A-SVTFNLFRLLTRDLNCVASGDLCV-------------------------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 57.3325% -33 - C3 -1F8R OXLA_CALRH A:[99-176] --------------------------------------------------------------------------------------------------------REY------IRKFDLRLNEFSQENDNAWY----FIKNIRKKVGEV----------K---------K------DPGLLKYPVK--P------------SEA--GKSAGQ---L--YEESL-GKVVEELKRTNCSYI------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 56.2225% -36 - C3 -1F8S OXLA_CALRH A:[99-176] --------------------------------------------------------------------------------------------------------REY------IRKFDLRLNEFSQENDNAWY----FIKNIRKKVGEV----------K---------K------DPGLLKYPVK--P------------SEA--GKSAGQ---L--YEESL-GKVVEELKRTNCSYI------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 56.1325% -31 - C3 -2IID OXLA_CALRH A:[99-176] --------------------------------------------------------------------------------------------------------REY------IRKFDLRLNEFSQENDNAWY----FIKNIRKKVGEV----------K---------K------DPGLLKYPVK--P------------SEA--GKSAGQ---L--YEESL-GKVVEELKRTNCSYI------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
42 Fugue 51.9714% -40 - C1 -1IEZ - RIBB_ECOLI A:[1-217] -----------------------------------------------------------------------------------------------------MNQTLLSSFGTPFERVENALAALR-EGRGVMVLDDEDRENEGDMIFPA----------ET--------M------TVEQMALTIRHGS------------GIV--CLCITE---D--RRKQL-DLPMMVENNTSAYGTG-F-TV---------T--IEAAEGV-TT-----GVSAA--DR--ITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGH--TEATI-DLMTLAGFK-PAGVLCELTNDDGTMARAPECIEFANKHNMALVTIEDLVAYRQAHERKAS-----------------------------------------------------------------------------------------------------------------------
27 HHSearch 47.2117% -42 - C3 -2CWB - A:[66-89] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WQPQLQQLRDMGIQDDELSL-RALQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14 HHSearch 45.7917% -44 - C3 -1WR1 - DSK2_YEAST B:[332-355] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YEHQLRQLNDMGFFDFDRNV-AALR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13 HHSearch 45.1722% -71 - C3 -1Q02 - A:[6-39] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADP----------------RLIESLSQMLSMGFSDEGGWLTRLLQ----TKNYD----------------------------------------------------------------------------------------------------------------------------------------------------------------------
16 HHSearch 42.6617% -27 - C3 -2DNA - A:[20-43] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKEMECLQAMGFVNYNANL-QALI----A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17 HHSearch 41.9623% -19 - C3 -2KNZ - A:[12-33] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QQQLEQLNSMGFINREANL-QAL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30 HHSearch 41.2025% -33 - C3 -2PXG - ? A:[17-52] -----------------------------------------------------------------------------------------------------------------------------------LI----KQNAVEQLQV-G----------Q---------S------KQQVSALLGT--P------------SIP--DPFHAQ---R-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15 HHSearch 40.7221% -13 - C3 -1VEJ - ? A:[30-53] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QQELEELKALGFANRDANL-QALV----A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------