@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0931: (2016-03-20 )
MYFIDNNNEKDPRINLAVEEFILTELNLDEPVLLFYINKPSIIIGRNQNTVEEIDTEYVEKNDVIVVRRLSGGGAVYHDEGNLNFSFITEDDGESFHNFAKFTQPIVEALKRLGVNAELKGRNDLLIDGFKVSGNAQFATKGKMFSHGTLMYDLNLDNVAASLKPRKDKIESKGIKSVRSRVANISDFMDQEMTTEEFRDLLLLYIFGVEKVEDVKEYKLTAADWEKIHEISAKRYGNWDWNYGKSPKFDLTRTKRFPVGAVDVRLNVQKGVITDIKIFGDFFGVKNVADIEEKLVNTTYKREVLAEALVDIDVKEYFGNITKDEFLDLLY

Atome Classification :

(23 SA) .........10........20......-.-.-30........40........50........60........70........80.......-.90..-......100.......110.--.....----------.120-.----------.....----..-130--.........140.......150.......160.......170.......180.......190-.........200...--------....210.....--..220---..-.....230..--.....240.......250......--.260.......270.......280-....-...290.......300...---....310.......320.......330
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MYFIDNNNEKDPRINLAVEEFILTELN-L-D-EPVLLFYINKPSIIIGRNQNTVEEIDTEYVEKNDVIVVRRLSGGGAVYHDEGNLNFSFI-TEDDG-ESFHNFAKFTQPIVEALKRL--GVNAE----------LKG--R----------NDLLI----DG-F----KVSGNAQFATKGKMFSHGTLMYDLNLDNVAASLKPRKDKIESKGIKSVRSRVANISDFMD---QEMTTEEFRDLLLLY--------IFGVEKVEDVKE--YKLTA---AD-WEKIHEISAK--RYGNWDWNYGKSPKFDLTRTKRFP--VGAVDVRLNVQKGVITDIKIFGDF-FGVK-NVADIEEKLVNTTYKREVL---AEALVDIDVKEYFGNITKDEFLDLLY
26 HHSearch 98.5945% -95 - C5 -1VQZ ? A:[13-340] MKYII-NHSNDTAFNIALEEYAFKHLLDE---DQIFLLWINKPSIIVGRHQNTIEEINRDYVRENGIEVVRRISGGGAVYHDLNNLNYTII-SKEDE-NKAFDFKSFSTPVINTLAQL--GVKAE----------FTG--R----------NDLEI----DG-K----KFCGNAQAYINGRIMHHGCLLFDVDLSVLANALKVSKDKFESKGVKSVRARVTNIINELP---KKITVEKFRDLLLEY--------MKKEYPE--MTE--YVFSE---EE-LAEINRIKDT--KFGTWDWNYGKSPEFNVRRGIKFT--SGKVEVFANVTESKIQDIKIYGDF-FGIE-DVAAVEDVLRGVKYEREDV---LKALKTIDITRYFAGISREEIAEAVV
1 PsiBlast_PDB 98.1744% -91 - C5 -1VQZ ? A:[15-339] -YIINHSN--DTAFNIALEEYAFKHLL-D-E-DQIFLLWINKPSIIVGRHQNTIEEINRDYVRENGIEVVRRISGGGAVYHDLNNLNYTII-SKEDE-NKAFDFKSFSTPVINTLAQL--GVKAE----------FTG--R----------NDLEI----DG-K----KFCGNAQAYINGRIMHHGCLLFDVDLSVLANALKVSKDKFESKGVKSVRARVTNIINELP---KKITVEKFRDLLLEY--------M--KKEYPEMTE--YVFSE---EE-LAEINRIKDT--KFGTWDWNYGKSPEFNVRRGIKFT--SGKVEVFANVTESKIQDIKIYGDF-FGIE-DVAAVEDVLRGVKYEREDV---LKALKTIDITRYFAGISREEIAEAV-
27 HHSearch 90.4933% -80 * C5 *3A7R LPLA_ECOLI A:[3-333] LRLLI-SDSYDPWFNLAVEECIFRQMPAT---QRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFM-AGKPE----YDKTISTSIVLNALNAL--GVSAE----------ASG--R----------NDLVVKTVEGD-R----KVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLP----GITHEQVCEAITEA--------FFAHYGE-RVEA--EIISPNKTPD-LPNFAETFAR---QSSWEWNFGQAPAFSHLLDERFT--WGGVELHFDVEKGHITRAQVFTDS-LNPA-PLEALAGRLQGCLYRADML---QQECEALLVDFPEQEKELRELSAWMA
2 PsiBlast_PDB 81.4533% -74 - C5 -3A7A LPLA_ECOLI A:[12-320] ----------DPWFNLAVEECIFRQMP-A-T-QRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFM-A---G-KPEYDKTISTSIVLNALNAL--GVSAE----------ASG--R----------NDLVV----KT-VEGDRKVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAITEAFFAHYGERVEAEIISPNKTPDLPN--FAETF---A--------------RQSSWEWNFGQAPAFSHLLDERFT--WGGVELHFDVEKGHITRAQVFTDS-LNPA-PLEALAGRLQGCLYRADMLQQECEALL-VDFPE---------------
3 PsiBlast_PDB 81.0633% -74 - C5 -3A7R LPLA_ECOLI A:[12-320] ----------DPWFNLAVEECIFRQMP-A-T-QRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFM-A---G-KPEYDKTISTSIVLNALNAL--GVSAE----------ASG--R----------NDLVV----KT-VEGDRKVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAITEAFFAHYGERVEAEIISPNKTPDLPN--FAETF---A--------------RQSSWEWNFGQAPAFSHLLDERFT--WGGVELHFDVEKGHITRAQVFTDS-LNPA-PLEALAGRLQGCLYRADMLQQECEALL-VDFPE---------------
20 PsiBlast_CBE 80.7333% -68 - C5 -4TVW LPLA_ECOLI D:[16-324] ----------DPWFNLAVAECIFRQMP-A-T-QRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFM-A---G-KPEYDKTISTSIVLNALNAL--GVSAE----------ASG--R----------NDLVV----KT-VEGDRKVSGSAYRETKDRGAHGGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAITEAFFAHYGERVEAEIISPNKTPDLPN--FAETF---A--------------RQSSWEWNFGQAPAFSHLLDERFT--WGGVELHFDVEKGHITRAQVFTDS-LNPA-PLEALAGRLQGCLYRADMLQQECEALL-VDFPE---------------
6 PsiBlast_PDB 80.6433% -68 - C5 -4TVW LPLA_ECOLI A:[16-324] ----------DPWFNLAVAECIFRQMP-A-T-QRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFM-A---G-KPEYDKTISTSIVLNALNAL--GVSAE----------ASG--R----------NDLVV----KT-VEGDRKVSGSAYRETKDRGAHGGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAITEAFFAHYGERVEAEIISPNKTPDLPN--FAETF---A--------------RQSSWEWNFGQAPAFSHLLDERFT--WGGVELHFDVEKGHITRAQVFTDS-LNPA-PLEALAGRLQGCLYRADMLQQECEALL-VDFPE---------------
21 PsiBlast_CBE 80.4833% -70 - C5 -4TVW LPLA_ECOLI C:[16-324] ----------DPWFNLAVAECIFRQMP-A-T-QRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFM-A---G-KPEYDKTISTSIVLNALNAL--GVSAE----------ASG--R----------NDLVV----KT-VEGDRKVSGSAYRETKDRGAHGGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAITEAFFAHYGERVEAEIISPNKTPDLPN--FAETF---A--------------RQSSWEWNFGQAPAFSHLLDERFT--WGGVELHFDVEKGHITRAQVFTDS-LNPA-PLEALAGRLQGCLYRADMLQQECEALL-VDFPE---------------
18 PsiBlast_CBE 80.2533% -66 - C5 -3A7A LPLA_ECOLI C:[12-320] ----------DPWFNLAVEECIFRQMP-A-T-QRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFM-A---G-KPEYDKTISTSIVLNALNAL--GVSAE----------ASG--R----------NDLVV----KT-VEGDRKVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAITEAFFAHYGERVEAEIISPNKTPDLPN--FAETF---A--------------RQSSWEWNFGQAPAFSHLLDERFT--WGGVELHFDVEKGHITRAQVFTDS-LNPA-PLEALAGRLQGCLYRADMLQQECEALL-VDFPE---------------
22 PsiBlast_CBE 80.2133% -71 - C5 -4TVW LPLA_ECOLI B:[16-324] ----------DPWFNLAVAECIFRQMP-A-T-QRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFM-A---G-KPEYDKTISTSIVLNALNAL--GVSAE----------ASG--R----------NDLVV----KT-VEGDRKVSGSAYRETKDRGAHGGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAITEAFFAHYGERVEAEIISPNKTPDLPN--FAETF---A--------------RQSSWEWNFGQAPAFSHLLDERFT--WGGVELHFDVEKGHITRAQVFTDS-LNPA-PLEALAGRLQGCLYRADMLQQECEALL-VDFPE---------------
28 HHSearch 80.1125% -80 - C5 -2E5A LIPT_BOVIN A:[5-340] GLILQ-SISNDVYHNLAVEDWIHDHMN-L-EGKPVLFLWRNSPTVVIGRHQNPWQECNLNLMREEGVKLARRRSGGGTVYHDMGNINLTFF-TTKKK----YDRMENLKLVVRALKAVHPHLDVQ----------ATK--R----------FDLLL----DGQF----KISGTASKIGRNAAYHHCTLLCGTDGTFLSSLLKSPYQGIRSNATASTPALVKNLMEKDP---T-LTCEVVINAVATE--------YATSHQI-DNHIHLINPTD---ETVFPGINSKAIE---LQTWEWIYGKTPKFSVDTSFTVLHSHVEIKVFIDVKNGRIEVCNIEAPDHWLPLEICDQLNSSLIGSKFSPIET---TV-------------DELHSKWNILC
19 PsiBlast_CBE 79.7933% -81 - C5 -4TVY LPLA_ECOLI B:[16-324] ----------DPWFNLAVAECIFRQMP-A-T-QRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFM-A---G-KPEYDKTISTSIVLNALNAL--GVSAE----------ASG--R----------NDLVV----KT-VEGDRKVSGSAYRETKDRGAHGGTLLLNADLSRLANYLN----------------RVTNLTELLPGITHEQVCEAITEAFFAHYGERVEAEIISPNKTPDLPN--FAETF---A--------------RQSSWEWNFGQAPAFSHLLDERFT--WGGVELHFDVEKGHITRAQVFTDS-LNPA-PLEALAGRLQGCLYRADMLQQECEALL-VDFPE---------------
5 PsiBlast_PDB 78.9933% -73 - C5 -1X2H LPLA_ECOLI A:[12-320] ----------DPWFNLAVEECIFRQMP-A-T-QRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFM-A---G-KPEYDKTISTSIVLNALNAL--GVSAE----------ASG--R----------NDLVV----KT-VEGDRKVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAK-------RVTNLTELLPGITHEQVCEAITEAFFAHYGERVEAEIISPNKTPDLPN--FAETF---A--------------RQSSWEWNFGQAPAFSHLLDERFT--WGGVELHFDVEKGHITRAQVFTDS-LNPA-PLEALAGRLQGCLYRADMLQQECEALL-VDFPE---------------
25 PsiBlast_CBE 78.1132% -91 - C5 -2C8M LPLAN_THEAC B:[15-255] ------------RMSLAYDEAIYRSFQ-YGD-KPILRFYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRSSDDM-DITSMFRTMNEAVVNSLRIL--GLDARPGELNDVSIPVNK--K----------TDIMA----GE-K----KIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVL------------KSTRERVANVTDFVD-----VSIDEVRNALIRG--------FSETLHI-DFRE--DTITE---KE-ESLARELFDK--KYSTEEWNMG----------------------------------------------------------------------------------------------
29 HHSearch 77.8032% -89 - C5 -2C8M LPLAN_THEAC A:[4-256] RLLLL-ETPGNTRMSLAYDEAIYRSFQ-Y-GDKPILRFYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVV-RSSDDMDITSMFRTMNEAVVNSLRIL--GLDAR----------PGE--LNDVSIPVNKKTDIMA----GE-K----KIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLK---------------ERVANVTDFV-----DVSIDEVRNALIRG--------FSETLHI-DFRE--DTITE---KE-ESLARELFDK--KYSTEEWNMGL---------------------------------------------------------------------------------------------
8 PsiBlast_PDB 76.8832% -87 - C5 -2ART LPLAN_THEAC A:[15-255] ------------RMSLAYDEAIYRSFQ-YGD-KPILRFYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRSSDDM-DITSMFRTMNEAVVNSLRIL--GLDARPGELNDVSIPVNK--K----------TDIMA----GE-K----KIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLKVP----------STRERVANVTDFVD-----VSIDEVRNALIRG--------FSETLHI-DFRE--DTITE---KE-ESLARELFDK--KYSTEEWNMG----------------------------------------------------------------------------------------------
9 PsiBlast_PDB 76.7232% -83 - C5 -2ARU LPLAN_THEAC A:[15-255] ------------RMSLAYDEAIYRSFQ-YGD-KPILRFYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRSSDDM-DITSMFRTMNEAVVNSLRIL--GLDARPGELNDVSIPVNK--K----------TDIMA----GE-K----KIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLKVP----------STRERVANVTDFVD-----VSIDEVRNALIRG--------FSETLHI-DFRE--DTITE---KE-ESLARELFDK--KYSTEEWNMG----------------------------------------------------------------------------------------------
24 PsiBlast_CBE 76.4532% -89 - C5 -2C8M LPLAN_THEAC C:[15-255] ------------RMSLAYDEAIYRSFQ-YGD-KPILRFYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRSSDDM-DITSMFRTMNEAVVNSLRIL--GLDARPGELNDVSIPVNK--K----------TDIMA----GE-K----KIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVL------------KSTRERVANVTDFVD-----VSIDEVRNALIRG--------FSETLHI-DFRE--DTITE---KE-ESLARELFDK--KYSTEEWNMG----------------------------------------------------------------------------------------------
23 PsiBlast_CBE 76.3232% -86 - C5 -2C8M LPLAN_THEAC D:[15-255] ------------RMSLAYDEAIYRSFQ-YGD-KPILRFYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRSSDDM-DITSMFRTMNEAVVNSLRIL--GLDARPGELNDVSIPVNK--K----------TDIMA----GE-K----KIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLK--------------RERVANVTDFVD-----VSIDEVRNALIRG--------FSETLHI-DFRE--DTITE---KE-ESLARELFDK--KYSTEEWNMG----------------------------------------------------------------------------------------------
10 PsiBlast_PDB 76.3132% -90 - C5 -2C7I - LPLAN_THEAC A:[15-255] ------------RMSLAYDEAIYRSFQ-YGD-KPILRFYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRSSDDM-DITSMFRTMNEAVVNSLRIL--GLDARPGELNDVSIPVNK--K----------TDIMA----GE-K----KIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLK--------------RERVANVTDFVD-----VSIDEVRNALIRG--------FSETLHI-DFRE--DTITE---KE-ESLARELFDK--KYSTEEWNMG----------------------------------------------------------------------------------------------
11 PsiBlast_PDB 75.8032% -94 - C5 -2C8M LPLAN_THEAC A:[15-255] ------------RMSLAYDEAIYRSFQ-YGD-KPILRFYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRSSDDM-DITSMFRTMNEAVVNSLRIL--GLDARPGELNDVSIPVNK--K----------TDIMA----GE-K----KIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLK---------------ERVANVTDFVD-----VSIDEVRNALIRG--------FSETLHI-DFRE--DTITE---KE-ESLARELFDK--KYSTEEWNMG----------------------------------------------------------------------------------------------
7 PsiBlast_PDB 74.7432% -81 - C5 -3R07 LPLAN_THEAC A:[38-278] ------------RMSLAYDEAIYRSFQ-YGD-KPILRFYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRSSDDM-DITSMFRTMNEAVVNSLRIL--GLDARPGELNDVSIPV------------------------GE-K----KIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLKVPDEKFRDKIAKSTRERVANVTDFVD-----VSIDEVRNALIRG--------FSETLHI-DFRE--DTITE---KE-ESLARELFDK--KYSTEEWNMG----------------------------------------------------------------------------------------------
13 PsiBlast_PDB 70.9031% -75 - C5 -2E5A LIPT_BOVIN A:[18-269] --------------NLAVEDWIHDHMN-L-EGKPVLFLWRNSPTVVIGRHQNPWQECNLNLMREEGVKLARRRSGGGTVYHDMGNINLTFF-TTKKK-YDRMENLKL---VVRALKAV--HPHLD----------VQATKR----------FDLLL----DGQF----KISGTASKIGRNAAYHHCTLLCGTDGTFLSSLLKSPYQGIRSNATASTPALVKNLME-KD---PTLTCEVVINAVATE--------YATSHQI-DNHI--HLINP---TD-ETVFPGINSKAIELQTWEWIYGKTPKFSV---------------------------------------------------------------------------------------