Atome 2 Filter

@TOME V2.3
(Nov 2016)

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3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling

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Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]

Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1405: (2016-03-24 )
LELPFSGQSIIPAAHNQKDMEKILELGLTYMVMLETHVAQLKSLVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTRGNAIMKAKQHKMLAIQRLFMIDSSACNKGVALIQKVQPDCIELLPGIIPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLW

Atome Classification :

	(20 SA)									.........10.......-----.20..----.-.....30....-----------------------.-----------------------..---.40........50-.-........60...---...--.-.70........80.....--.-------.------.--------90-----.........100.......110.-......120.......130-.----.---.--..-----...140....--.--..150-.........160.......170....-...180
		(Atome)	(Ident)	(Tito)	(Num)		(Ligand)	(Uniprot)		LELPFSGQSIIPAAHNQK-----DMEKI----L-ELGLTYMVMLE-----------------------T-----------------------HV---AQLKSLVKYAQA--G-GKKVLLHADLVNG---LKN--D-DYAIDFLCTEICPDGIIS--T-------R------G--------N------AIMKAKQHKMLAIQRLFMIDSSA-CNKGVALIQKVQPDCIEL--L----P---G--II-----PEQVQKMTQK--L--HIP---VIAGGLIETSEQVNQVIASGAIAVTT-SNKHLW
2	HHSearch	96.72	98%	-141	- C4 -	3KTS		?	A:[3-184]	LELPFSNQSIIPAAHNQK-----DMEKI----L-ELDLTYMVMLE-----------------------T-----------------------HV---AQLKALVKYAQA--G-GKKVLLHADLVNG---LKN--D-DYAIDFLCTEICPDGIIS--T-------R------G--------N------AIMKAKQHKMLAIQRLFMIDSSA-YNKGVALIQKVQPDCIEL--L----P---G--II-----PEQVQKMTQK--L--HIP---VIAGGLIETSEQVNQVIASGAIAVTT-SNKHLW
36	PsiBlast_CBE	96.59	97%	-140	- C4 -	3KTS		?	G:[3-184]	LELPFSNQSIIPAAHNQK-----DMEKI----L-ELDLTYMVMLE-----------------------T-----------------------HV---AQLKALVKYAQA--G-GKKVLLHADLVNG---LKN--D-DYAIDFLCTEICPDGIIS--T-------R------G--------N------AIMKAKQHKMLAIQRLFMIDSSA-YNKGVALIQKVQPDCIEL--L----P---G--II-----PEQVQKMTQK--L--HIP---VIAGGLIETSEQVNQVIASGAIAVTT-SNKHLW
21	PsiBlast_PDB	96.50	97%	-141	- C4 -	3KTS		?	A:[3-184]	LELPFSNQSIIPAAHNQK-----DMEKI----L-ELDLTYMVMLE-----------------------T-----------------------HV---AQLKALVKYAQA--G-GKKVLLHADLVNG---LKN--D-DYAIDFLCTEICPDGIIS--T-------R------G--------N------AIMKAKQHKMLAIQRLFMIDSSA-YNKGVALIQKVQPDCIEL--L----P---G--II-----PEQVQKMTQK--L--HIP---VIAGGLIETSEQVNQVIASGAIAVTT-SNKHLW
39	PsiBlast_CBE	96.29	97%	-141	- C4 -	3KTS		?	D:[3-184]	LELPFSNQSIIPAAHNQK-----DMEKI----L-ELDLTYMVMLE-----------------------T-----------------------HV---AQLKALVKYAQA--G-GKKVLLHADLVNG---LKN--D-DYAIDFLCTEICPDGIIS--T-------R------G--------N------AIMKAKQHKMLAIQRLFMIDSSA-YNKGVALIQKVQPDCIEL--L----P---G--II-----PEQVQKMTQK--L--HIP---VIAGGLIETSEQVNQVIASGAIAVTT-SNKHLW
37	PsiBlast_CBE	96.22	97%	-143	- C4 -	3KTS		?	F:[3-184]	LELPFSNQSIIPAAHNQK-----DMEKI----L-ELDLTYMVMLE-----------------------T-----------------------HV---AQLKALVKYAQA--G-GKKVLLHADLVNG---LKN--D-DYAIDFLCTEICPDGIIS--T-------R------G--------N------AIMKAKQHKMLAIQRLFMIDSSA-YNKGVALIQKVQPDCIEL--L----P---G--II-----PEQVQKMTQK--L--HIP---VIAGGLIETSEQVNQVIASGAIAVTT-SNKHLW
41	PsiBlast_CBE	96.06	97%	-142	- C4 -	3KTS		?	B:[3-184]	LELPFSNQSIIPAAHNQK-----DMEKI----L-ELDLTYMVMLE-----------------------T-----------------------HV---AQLKALVKYAQA--G-GKKVLLHADLVNG---LKN--D-DYAIDFLCTEICPDGIIS--T-------R------G--------N------AIMKAKQHKMLAIQRLFMIDSSA-YNKGVALIQKVQPDCIEL--L----P---G--II-----PEQVQKMTQK--L--HIP---VIAGGLIETSEQVNQVIASGAIAVTT-SNKHLW
35	PsiBlast_CBE	95.37	97%	-142	- C4 -	3KTS		?	H:[3-184]	LELPFSNQSIIPAAHNQK-----DMEKI----L-ELDLTYMVMLE-----------------------T-----------------------HV---AQLKALVKYAQA--G-GKKVLLHADLVNG---LKN--D-DYAIDFLCTEICPDGIIS--T-------R------G--------N------AIMKAKQHKMLAIQRLFMIDSSA-YNKGVALIQKVQPDCIEL--L----P---G--II-----PEQVQKMTQK--L--HIP---VIAGGLIETSEQVNQVIASGAIAVTT-SNKHLW
38	PsiBlast_CBE	95.27	97%	-140	- C4 -	3KTS		?	E:[3-184]	LELPFSNQSIIPAAHNQK-----DMEKI----L-ELDLTYMVMLE-----------------------T-----------------------HV---AQLKALVKYAQA--G-GKKVLLHADLVNG---LKN--D-DYAIDFLCTEICPDGIIS--T-------R------G--------N------AIMKAKQHKMLAIQRLFMIDSSA-YNKGVALIQKVQPDCIEL--L----P---G--II-----PEQVQKMTQK--L--HIP---VIAGGLIETSEQVNQVIASGAIAVTT-SNKHLW
40	PsiBlast_CBE	94.81	97%	-140	- C4 -	3KTS		?	C:[4-184]	-ELPFSNQSIIPAAHNQK-----DMEKI----L-ELDLTYMVMLE-----------------------T-----------------------HV---AQLKALVKYAQA--G-GKKVLLHADLVNG---LKN--D-DYAIDFLCTEICPDGIIS--T-------R------G--------N------AIMKAKQHKMLAIQRLFMIDSSA-YNKGVALIQKVQPDCIEL--L----P---G--II-----PEQVQKMTQK--L--HIP---VIAGGLIETSEQVNQVIASGAIAVTT-SNKHLW
1	HHSearch	63.92	33%	-124	- C4 -	1VKF		?	A:[20-182]	---------------ALW-----DMDSI----G-EIEPDVVFLLK-----------------------S-----------------------DI---LNLKFHLKILKD--R-GKTVFVDMDFVNG---LGE--G-EEAILFVKK-AGADGIIT--I-------K------P--------K------NYVVAKKNGIPAVLRFFALDSKA-VERGIEQIETLGVDVVEV--L----P---G--AVA----PKVARKIPG-------RT---VIAAGLVETEEEAREILKH-VSAIST-SSRILW
22	PsiBlast_PDB	63.85	31%	-129	- C4 -	1VKF		?	A:[23-182]	-----------------------DMDSI----G-EIEPDVVFLLK-----------------------S-----------------------DI---LNLKFHLKILKD--R-GKTVFVDMDFVNG---LGE--G-EEAILF-VKKAGADGIIT--I-------K------P--------K------NYVVAKKNGIPAVLRFFALDSKA-VERGIEQIETLGVDVVEV--L----P---G--AV-----APKVAR---------KIPGRTVIAAGLVETEEEAREILKHVS-AIST-SSRILW
43	PsiBlast_CBE	62.87	32%	-131	- C4 -	1VKF		?	C:[35-182]	----------------------------------------VFLLK-----------------------S-----------------------DI---LNLKFHLKILKD--R-GKTVFVDMDFVNG---LGE--G-EEAILF-VKKAGADGIIT--I-------K------P--------K------NYVVAKKNGIPAVLRFFALDSKA-VERGIEQIETLGVDVVEV--L----P---G--AV-----APKVAR---------KIPGRTVIAAGLVETEEEAREILKHVS-AIST-SSRILW
42	PsiBlast_CBE	62.16	32%	-130	- C4 -	1VKF		?	D:[35-182]	----------------------------------------VFLLK-----------------------S-----------------------DI---LNLKFHLKILKD--R-GKTVFVDMDFVNG---LGE--G-EEAILF-VKKAGADGIIT--I-------K------P--------K------NYVVAKKNGIPAVLRFFALDSKA-VERGIEQIETLGVDVVEV--L----P---G--AV-----APKVAR---------KIPGRTVIAAGLVETEEEAREILKHVS-AIST-SSRILW
44	PsiBlast_CBE	62.11	32%	-128	- C4 -	1VKF		?	B:[35-182]	----------------------------------------VFLLK-----------------------S-----------------------DI---LNLKFHLKILKD--R-GKTVFVDMDFVNG---LGE--G-EEAILF-VKKAGADGIIT--I-------K------P--------K------NYVVAKKNGIPAVLRFFALDSKA-VERGIEQIETLGVDVVEV--L----P---G--AV-----APKVAR---------KIPGRTVIAAGLVETEEEAREILKHVS-AIST-SSRILW
3	HHSearch	51.96	15%	-107	- C4 -	1WA3		?	A:[3-180]	MEELFKKHKIVAVLRANSVEEAKEKALA----VFEGGVHLIEITF-----------------------T-----------------------V----PDADTVIKELSF--LKEKGAIIGAGTV-------T--S-VEQCRKAVE-SGAEFIVS--P-------HLD----E--------E------ISQFCKEKGVFYMPG---VMTP---T-ELVKAMKLGHTILKL--F----P---GEVVG-----PQFVKAMKGPF-P--NVK---FVPTGGVNL-DNVCEWFKAGVLAVGV-GSA---
16	HHSearch	51.07	14%	-97	- C4 -	1UB3		DEOC_THET8	A:[5-211]	---AHIDHTLLKPTATLE-----EVAKAAEEAL-EYGFYGLCIPP-----------------------S-----------------------YV---AWVRA---RYPH--A-PFRLVTVVGFPLGYQEKEV--K-ALEAALACA-RGADEVDMVLHLGRAKAGD------LDYLEAEVRA------VREAVPQAVLKVILETGYFSPEE-IARLAEAAIRGGADFLKT--S----T---G--FGPRGASLEDVALLVRV--AQGRAQ---VKAAGGIRDRETALRMLKAGASRLGTSSGVALV
11	HHSearch	50.99	15%	-100	- C4 -	2V82		DGOA_ECOLI	A:[25-178]	------------------------VGAV----I-DAGFDAVEIPL-----------------------N-----------------------SP---QW-EQSIPAIVDA-Y-GDKALIGAGTV-------L--K-PEQVDALAR-MGCQLIVT--P-------NIH----S--------E------VIRRAVGYGMT-----VCPGCAT-ATEAFT-ALEAGAQALKI--F----P---S--SAFG---PQYIKALKAVLPS--DIA---VFAVGGVTP-ENLAQWIDAGCAGAGL-GSD---
12	HHSearch	50.15	14%	-122	- C4 -	2EKC	-	TRPA_AQUAE	A:[37-236]	------------------------FKEV----L-KNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGI-----------------------RF---EDVLELSETLRKEFP-DIPFLL-MTYYNP---IFRI-GLEKFCRLSRE-KGIDGFIV--P-------DLPPEEAE--------E------LKAVMKKYVLSFVP---LGAPTSTRKR-IKLICEAADEMTYF--VSVTGY---E--RI-----KKKVEEYREL--C--DKP---VVVGFGVSKKEHAREIG-SFADGVVV-GSA---
9	HHSearch	49.60	15%	-105	- C4 -	3VND		?	A:[37-237]	-----------------------IIQTL----V-DNGADALELGF-----------------------PFSDPLADGPVIQGANLRSLAAGTTS---SDCFDIITKVRAQHP-DMPIGLL-LYANL---VFANGI-DEFYTKAQA-AGVDSVLI--A-------D------V--------PVEESAPFSKAAKAHGIAPI---FIAPPNA-DADTLKMVSEQGEGYTYLLSR----AGVT---PI-----ENILTQLAEF--N--APP---PLLGFGIAEPEQVRAAIKAGAAGAIS-GSA---
20	HHSearch	49.46	16%	-100	- C4 -	3IGS		NANE2_SALTY	A:[90-214]	---------------FLD-----DVDAL----A-QAGAAIIAVDG-----------------------T-----------------------ARQRPVAVEALLARIHH--H-HLLTMADCSSV-------------DDGLACQR-LGADIIGT--T-------M------S--------G------------------------------YTTPDT--------------P----E---E--PD-----LPLVKALHDA--G---CR---VIAEGRYNSPALAAEAIRYGAWAVTV-GS-AIT