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(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PA0024: (2015-12-18 )
MTDRIAAVKTYLLDLQDRICAALEAEDGKARFAEDAWERPAGGGGRTRVIGDGALIEKGGVNFSHVFGDSLPPSASAHRPELAGRGFQALGVSLVIHPENPHVPTSHANVRFFCAEKEGEEPVWWFGGGFDLTPYYAHEEDCVHWHRVARDACAPFGADVYPRYKEWCDRYFHLKHRNEPRGIGGLFFDDLNQWDFDTCFAFIRAIGDAYIDAYLPIVQRRKHTPFDERQREFQAYRRGRYVEFNLVFDRGTLFGLQSGGRTESILMSLPPQVRWGYDWKPEPGSEEARLTEYFLADRDWLAGQP

Atome Classification :

(20 SA) -----------------------------------------------------.........---------------10......--------------..20........30.......------.-40--------.-...--.....50......----..60---......------..70........----------------80---.-------...---.----...----90..--......100.......110...-...-.120.......-----------130.......--------140.......150...------------..-----------------..160-........170--------.......----180----.......-..-190..--..-------...200.......210.......----220....-----...230....-----------...--------240.......250-------------....-..-.260--.......-----..270--.....----..--------.280--------.........290------------...-----......300...------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -----------------------------------------------------MTDRIAAVK---------------TYLLDLQD--------------RICAALEAEDGKARFAEDAWE------R-P---------A-GGG--GRTRVIGDGALIE----KGGV---NFSHVF------GDSLPPSASAHR----------------PE---L-------AGR---G----FQA----LGVS--LVIHPENPHVPTSHANVRFFCA-EKE-GEEPVWWFGGG-----------FDLTPYYAHE--------EDCVHWHRVARDACAP------------FG-----------------ADVY--PRYKEWCDRYF--------HLKHRNE----P------RGIGGLF-FD-DLNQW--DF-------DTCFAFIRAIGDAYIDAYLPIVQ----RRKHTPF-----DERQREFQAY-----------RRG--------RYVEFNLVFDRGT-------------LFGL-QS-GG----RTESILM-----SLPP---QVRWG----YD--------WK----------PEPGSEEARL--------------TEY-----FLADRDWLAGQP------------------------------------------------
5 PsiBlast_PDB 94.3470% -92 - C5 -2QT8 HEM6_LEIMA A:[13-309] ---------------------------------------------------------VEAVK---------------DFLLKLQD--------------DICEALEAEDGQATFVEDKWT------R-E---------G-GGG--GRTRVMVDGAVIE----KGGV---NFSHVY------GKGLPMSSTERH----------------PD---I-------AGC---N----FEA----MGVS--LVIHPKNPHVPTSHANVRLFVA-ERE-GKEPVWWFGGG-----------FDLTPYYAVE--------EDCRDFHQVAQDLCKP------------FG-----------------ADVY--ARFKGWCDEYF--------FIPYRNE----A------RGIGGLF-FD-DLNEW--PF-------EKCFEFVQAVGKGYMDAYIPIVN----RRKNTPY-----TEQQVEFQEF-----------RRG--------RYAEFNLVIDRGT-------------KFGL-QS-GG----RTESILI-----SLPP---RARWG----YN--------WQ----------PEPGTPEARL--------------TEY-----FLTKRQWV----------------------------------------------------
3 PsiBlast_PDB 94.1369% -96 - C5 -3E8J ? A:[8-306] -------------------------------------------------------LPVEAVK---------------EFLLKLQD--------------DICHAIEAEDEQATFMEDKWT------R-E---------G-GGG--GRTRVIANGAVIE----KGGV---NFSHVY------GK----------------------------------------GC---N----YQA----MGVS--LVIHPKNPHVPTSHANVRLFVA-EKE-GKEPVWWFGGG-----------FDLTPYYAVE--------EDCYYFHHVAQELCRP------------FG-----------------ADVY--ERFKAWCDEYF--------FIPHRNE----A------RGIGGLF-FD-DLNEW--PF-------EKCFAFMQAVGKGFIDAYIPIVN----RRKNTPY-----TEQQVEFQEF-----------RRG--------RYAEFNLVIDRGT-------------KFGL-QS-GG----RTESILM-----SLPP---RARWG----YN--------WH----------PEPGTPEARL--------------TEY-----FLTKKQWV----------------------------------------------------
6 PsiBlast_PDB 94.0070% -92 - C5 -3DWS HEM6_LEIMA A:[13-309] ---------------------------------------------------------VEAVK---------------DFLLKLQD--------------DICEALEAEDGQATFVEDKWT------R-E---------G-GGG--GRTRVMVDGAVIE----KGGV---NFSHVY------GKGLPMSSTERH----------------PD---I-------AGC---N----FEA----MGVS--LVIHPKNPHVPTSHANVRLFVA-ERE-GKEPVWWFGGG-----------FDLTPYYAVE--------EDCRDFHQVAQDLCKP------------FG-----------------ADVY--ARFKGWCDEYF--------FIPYRNE----A------RGIGGLF-FD-DLNEW--PF-------EKCFEFVQAVGKGYMDAYIPIVN----RRKNTPY-----TEQQVEFQEF-----------RRG--------RYAEFNLVIDRGT-------------KFGL-QS-GG----RTESILI-----SLPP---RARWG----YN--------WQ----------PEPGTPEARL--------------TEY-----FLTKRQWV----------------------------------------------------
1 PsiBlast_PDB 93.9570% -95 - C5 -3EJO - ? A:[1-301] -----------------------------------------------------MSLAIEAVK---------------DFLVKLQD--------------DICEALEAEDGQATFMEDKWT------R-E---------G-GGG--GRTRVMVNGAVIE----KGGV---NFSHVY------GKGL-------------------------D---M-------TGC---N----FQA----MGVS--LVIHPKNPHVPTSHANVRLFVA-ERE-GKEPVWWFGGG-----------FDLTPYYAVE--------EDCRYFHQVAQDLCKP------------FG-----------------ADVY--TRFKVWCDEYF--------FIPYRNE----A------RGIGGLF-FD-DLNEW--PF-------EKCFEFVQAVGKGYIDAYIPIVN----RRKNTPY-----TEQQVEFQEF-----------RRG--------RYAEFNLVIDRGT-------------KFGL-QS-GG----RTESILI-----SLPP---RARWG----YD--------WQ----------PEPGTPEARL--------------TEY-----FLMKRQWV----------------------------------------------------
2 PsiBlast_PDB 93.9169% -97 - C5 -3DWR HEM6_LEIMA A:[9-309] -----------------------------------------------------MSLAVEAVK---------------DFLLKLQD--------------DICEALEAEDGQATFVEDKWT------R-E---------G-GGG--GRTRVMVDGAVIE----KGGV---NFSHVY------G-----------------------------------------GC---N----FEA----MGVS--LVIHPKNPHVPTSHANVRLFVA-ERE-GKEPVWWFGGG-----------FDLTPYYAVE--------EDCRDFHQVAQDLCKP------------FG-----------------ADVY--ARFKGWCDEYF--------FIPYRNE----A------RGIGGLF-FD-DLNEW--PF-------EKCFEFVQAVGKGYMDAYIPIVN----RRKNTPY-----TEQQVEFQEF-----------RRG--------RYAEFNLVIDRGT-------------KFGL-QS-GG----RTESILI-----SLPP---RARWG----YN--------WQ----------PEPGTPEARL--------------TEY-----FLTKRQWV----------------------------------------------------
14 PsiBlast_CBE 93.6569% -92 - C5 -3E8J ? B:[6-306] -----------------------------------------------------MSLPVEAVK---------------EFLLKLQD--------------DICHAIEAEDEQATFMEDKWT------R-E---------G-GGG--GRTRVIANGAVIE----KGGV---NFSHVY------GKG---------------------------------------GC---N----YQA----MGVS--LVIHPKNPHVPTSHANVRLFVA-E---GKEPVWWFGGG-----------FDLTPYYAVE--------EDCYYFHHVAQELCRP------------FG-----------------ADVY--ERFKAWCDEYF--------FIPHRNE----A------RGIGGLF-FD-DLNEW--PF-------EKCFAFMQAVGKGFIDAYIPIVN----RRKNTPY-----TEQQVEFQEF-----------RRG--------RYAEFNLVIDRGT-------------KFGL-QS-GG----RTESILM-----SLPP---RARWG----YN--------WH----------PEPGTPEARL--------------TEY-----FLTKKQWV----------------------------------------------------
13 PsiBlast_CBE 93.1569%-104 - C5 -3DWR HEM6_LEIMA B:[9-309] -----------------------------------------------------MSLAVEAVK---------------DFLLKLQD--------------DICEALEAEDGQATFVEDKWT----------------------G--GRTRVMVDGAVIE----KGGV---NFSHVY------G------------------------------------------C---N----FEA----MGVS--LVIHPKNPHVPTSHANVRLFVA-------EPVWWFGGG-----------FDLTPYYAVE--------EDCRDFHQVAQDLCKP------------FG-----------------ADVY--ARFKGWCDEYF--------FIPYRNE----A------RGIGGLF-FD-DLNEW--PF-------EKCFEFVQAVGKGYMDAYIPIVN----RRKNTPY-----TEQQVEFQEF-----------RRG--------RYAEFNLVIDRGT-------------KFGL-QS-GG----RTESILI-----SLPP---RARWG----YN--------WQ----------PEPGTPEARL--------------TEY-----FLTKRQWV----------------------------------------------------
20 HHSearch 85.6146% -77 - C5 -2AEX HEM6_HUMAN A:[38-346] ------------------------------------------------------GDMKTKME---------------LLILETQA--------------QVCQALAQVDGGANFSVDRWE------R-K---------E-GGG--GISCVLQDGCVFE----KAGV---SISVVH------GNLSEEAAKQMR----------------SR---GKVLKTKDGKL---P----FCA----MGVS--SVIHPKNPHAPTIHFNYRYFEV-EEA-DGNKQWWFGGG-----------CDLTPTYLNQ--------EDAVHFHRTLKEACDQ------------HG-----------------PDLY--PKFKKWCDDYF--------FIAHRGE----R------RGIGGIF-FD-DLDSP--SK-------EEVFRFVQSCARAVVPSYIPLVK----KHCDDSF-----TPQEKLWQQL-----------RRG--------RYVEFNLLYDRGT-------------KFGL-FTPGS----RIESILM-----SLPL---TARWE----YM--------HS----------PSENSKEAEI--------------LEV-----LRHPRDWVR---------------------------------------------------
7 PsiBlast_PDB 85.0444% -79 - C5 -2AEX HEM6_HUMAN A:[39-345] -------------------------------------------------------DMKTKME---------------LLILETQA--------------QVCQALAQVDGGANFSVDRWE------R-K---------E-GGG--GISCVLQDGCVFE----KAGV---SISVVH------GNLSEEAAKQMR----------------SRGKVL-------KTK---DGKLPFCA----MGVS--SVIHPKNPHAPTIHFNYRYFEV-EEA-DGNKQWWFGGG-----------CDLTPTYLNQ--------EDAVHFHRTLKEACDQ------------HG-----------------PDLY--PKFKKWCDDYF--------FIAHRGE----R------RGIGGIF-FD-DLDSP--SK-------EEVFRFVQSCARAVVPSYIPLVK----KHCDDSF-----TPQEKLWQQL-----------RRG--------RYVEFNLLYDRGT-------------KFGLFTP-GS----RIESILM-----SLPL---TARWE----YM--------HS----------PSENSKEAEI--------------LEV-----LRHPRDWVR---------------------------------------------------
8 PsiBlast_PDB 82.6045% -77 - C5 -1TKL - HEM6_YEAST A:[24-327] -----------------------------------------------------------------------------------QA--------------EITQGLESID-TVKFHADTWT------RGN---------D-GGG--GTSMVIQDGTTFE----KGGV---NVSVVY------GQLSPAAVSAMKADHKNLRLPEDPKTGLPV---T-------DGV---K----FFA----CGLS--MVIHPVNPHAPTTHLNYRYFETWNQD-GTPQTWWFGGG-----------ADLTPSYLYE--------EDGQLFHQLHKDALDK------------HD-----------------TALY--PRFKKWCDEYF--------YITHRKE----T------RGIGGIF-FD-DYDER--DP-------QEILKMVEDCFDAFLPSYLTIVK----RRKDMPY-----TKEEQQWQAI-----------RRG--------RYVEFNLIYDRGT-------------QFGL-RTPGS----RVESILM-----SLPE---HASWL----YN--------HH----------PAPGSREAKL--------------LEV-----TTKPREWVK---------------------------------------------------
9 PsiBlast_PDB 82.5145% -77 - C5 -1TLB - HEM6_YEAST A:[22-325] -----------------------------------------------------------------------------------QA--------------EITQGLESID-TVKFHADTWT------RGN---------D-GGG--GTSMVIQDGTTFE----KGGV---NVSVVY------GQLSPAAVSAMKADHKNLRLPEDPKTGLPV---T-------DGV---K----FFA----CGLS--MVIHPVNPHAPTTHLNYRYFETWNQD-GTPQTWWFGGG-----------ADLTPSYLYE--------EDGQLFHQLHKDALDK------------HD-----------------TALY--PRFKKWCDEYF--------YITHRKE----T------RGIGGIF-FD-DYDER--DP-------QEILKMVEDCFDAFLPSYLTIVK----RRKDMPY-----TKEEQQWQAI-----------RRG--------RYVEFNLIYDRGT-------------QFGL-RTPGS----RVESILM-----SLPE---HASWL----YN--------HH----------PAPGSREAKL--------------LEV-----TTKPREWVK---------------------------------------------------
15 PsiBlast_CBE 82.2845% -75 - C5 -1TLB HEM6_YEAST S:[22-325] -----------------------------------------------------------------------------------QA--------------EITQGLESID-TVKFHADTWT------RGN---------D-GGG--GTSMVIQDGTTFE----KGGV---NVSVVY------GQLSPAAVSAMKADHKNLRLPEDPKTGLPV---T-------DGV---K----FFA----CGLS--MVIHPVNPHAPTTHLNYRYFETWNQD-GTPQTWWFGGG-----------ADLTPSYLYE--------EDGQLFHQLHKDALDK------------HD-----------------TALY--PRFKKWCDEYF--------YITHRKE----T------RGIGGIF-FD-DYDER--DP-------QEILKMVEDCFDAFLPSYLTIVK----RRKDMPY-----TKEEQQWQAI-----------RRG--------RYVEFNLIYDRGT-------------QFGL-RTPGS----RVESILM-----SLPE---HASWL----YN--------HH----------PAPGSREAKL--------------LEV-----TTKPREWVK---------------------------------------------------
4 PsiBlast_PDB 79.6770% -11 - C5 -1VJU - HEM6_LEIMA A:[13-309] ---------------------------------------------------------VEAVK---------------DFLLKLQD--------------DICEALEAEDGQATFVEDKWT------R-E---------G-GGG--GRTRVMVDGAVIE----KGGV---NFSHVY------GKG------------------------------I-------AGC---N----FEA----MGVS--LVIHPKNPHVPTSHANVRLFVA-ERE-GKEPVWWFGGG-----------FDLTPYYAVE--------EDCRDFHQVAQDLCKP------------FG-----------------ADVY--ARFKGWCDEYF--------FIPYRNE----A------RGIGGLF-FD-DLNEW--PF-------EKCFEFVQAVGKGYMDAYIPIVN----RRKNTPY-----TEQQVEFQEF-----------RRG--------RYAEFNLVIDRGT-------------KFGL-QS-GG----RTESILI-----SLPP---RARWG----YN--------WQ----------PEPGTPEARL--------------TEY-----FLTKRQWV----------------------------------------------------
19 HHSearch 78.4370% -9 - C5 -1VJU - HEM6_LEIMA A:[9-309] -----------------------------------------------------MSLAVEAVK---------------DFLLKLQD--------------DICEALEAEDGQATFVEDKWT------R-E---------G-GGG--GRTRVMVDGAVIE----KGGV---NFSHVY------GKG------------------------------I-------AGC---N----FEA----MGVS--LVIHPKNPHVPTSHANVRLFVA-ERE-GKEPVWWFGGG-----------FDLTPYYAVE--------EDCRDFHQVAQDLCKP------------FG-----------------ADVY--ARFKGWCDEYF--------FIPYRNE----A------RGIGGLF-FD-DLNEW--PF-------EKCFEFVQAVGKGYMDAYIPIVN----RRKNTPY-----TEQQVEFQEF-----------RRG--------RYAEFNLVIDRGT-------------KFGL-QS-GG----RTESILI-----SLPP---RARWG----YN--------WQ----------PEPGTPEARL--------------TEY-----FLTKRQWV----------------------------------------------------
18 HHSearch 75.8946% -89 - C5 -1TXN HEM6_YEAST A:[10-270] ------------------------------------------------------LPIRQQME---------------ALIRRKQA--------------EITQGLESIDTV-KFHADTWT------R-G---------NDGGG--GTSMVIQDGTTFE----KGGV---NVSVVY------GQLSPAAVSAMK----------------AD---HKNLRLP-DGV---K----FFA----CGLS--MVIHPVNPHAPTTHLNYRYFET-WNQDGTPQTWWFGGG-----------ADLTPSYLYE--------EDGQLFHQLHKDALDK------------HD-----------------TALY--PRFKKWCDEYF--------YITHRKE----T------RGIGGIF-FD-DYDER--DP-------QEILKMVEDCFDAFLPSYLTIVK----RRKDMPY-----TKEEQQWQAI-----------RRG--------RYVEFN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11 PsiBlast_PDB 72.5742% -91 - C5 -1TK1 - HEM6_YEAST A:[24-265] -----------------------------------------------------------------------------------QA--------------EITQGLESID-TVKFHA-------------------------GG--GTSMVIQDGTTFE----KGGV---NVSVVY------GQLSPAAVSAMKADHK-------------------------DGV---K----FFA----CGLS--MVIHPVNPHAPTTHLNYRYFETWNQD-GTPQTWWFGGG-----------ADLTPSYLYE--------EDGQLFHQLHKDALDK------------HD-----------------TALY--PRFKK---------------------------------GIGGIF-FD-DYDER--DP-------QEILKMVEDCFDAFLPSYLTIVK----RRKDMPY-----TKEEQQWQAI-----------RRG--------R-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10 PsiBlast_PDB 71.6645% -83 - C5 -1TXN HEM6_YEAST A:[24-270] -----------------------------------------------------------------------------------QA--------------EITQGLESID-TVKFHADTWT------RGN---------D-GGG--GTSMVIQDGTTFE----KGGV---NVSVVY------GQLSPAAVSAMKADHKNLRLP--------------------DGV---K----FFA----CGLS--MVIHPVNPHAPTTHLNYRYFETWNQD-GTPQTWWFGGG-----------ADLTPSYLYE--------EDGQLFHQLHKDALDK------------HD-----------------TALY--PRFKKWCDEYF--------YITHRKE----T------RGIGGIF-FD-DYDER--DP-------QEILKMVEDCFDAFLPSYLTIVK----RRKDMPY-----TKEEQQWQAI-----------RRG--------RYVEFN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
33 Fugue 43.7619% -29 * C6 *1QF5 PURA_ECOLI A:[1-431] -------------------------------------------------------------G---------------NNVVVLGT--------------QW-----GDEGKGKIVDLLTERAKYVVR-Y---------Q-GGHNAGHTLVIN-GEKTVLHLIPSGILRENVTSII------GNGVVLSPAALM----------------KE---M-------KEL---E----DRG----IPVRERLLLSEACPLILDYHVALDNARE-KAR-GAKAIGTTGRG-------------IGPAYEDKVARRGLRVGDLFDKETFAEKLKEV------------MEYHNFQLVNYYKAEAVDYQKVL--DDTMAVADILTSMVVDVSDLLDQARQ----RGDFVMFEGAQGTL-LDIDHGTY--PYVTSSNTTAGGVATGSGLGPRYVDYVLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGATTGRRRRT--------GWLDTVAVRRAVQ-------------LNSL-SG-FC----LTKLDVL-----DGLK---EVKLC----VA--------YRMPDGREVTTTPLAADDWKGV--------------EPI-----YETMPGWSESTFGVKDRSGLPQAALNYIKRIEELTGVPIDIISTGPDRTETMILRDPFDA
29 Fugue 41.3318% -39 - C5 -4FDT ? A:[21-425] -----------------------------------------------------MQTKIQKYAGTAMPYPNRTDGMTPFYINHLGR--------------HGARFPTSRKALDKVEKVLVS------A-Q---------Q-ENG--LTSEGMALLSMIR----RLSR---LFDGQW------GK-LSKLGETEQ----------------EG---I-------AGR---M----IRNYPQLFSNS--AKIEAIATYVPRSINSMDAFLS-CMI-RHNPALQVQRSEGKQYNHILRFFDLNKSYVNY--------KEKGDWLPIYKAFVHKKISPVPIMKKFLLN-----------------PEQYLDKEAEEFVMALF--------SVAAILPDTSIP------LNLEDLFTLD-EWHRY--WQ-------TQNLRQYMSKSSAPVGKMLPVA------IAWPLL-----SEFIRSAQEV-----------ISGKSDYQANFRFAHAETVIPFVS-------------LMGI-EK-TDVQVCRPDSVSVYWKDYEISPMAANVQWL----FYRDRDQRIWVK----------ILLNEEAAALPISTACFPYYSWEKTRI-----FFNQRIEMAKKTLSVFN-------------------------------------------
32 Fugue 41.2314% -31 - C3 -4FDO DPRE1_MYCTU A:[27-481] TTTATRLTGWGRTAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQNGG---------------GLVIDMTPLNTIHSIDADTKLVDIDAGVNLDQLMKAALPFGLW------V-PVLPGTRQVTV-GGA--IACDIHGKNHHSA----GSFG---NHVRSMDLLTADGEIRHLTPTGED----------------AE---L-------FWATVGG----NGL----TGII--MRATIEMTPTSTAYFIADGDVT-ASL-DETIALHSDGS-----------EARYTYSSAW--------FDAISAPPKLGRAAVS------------RG-----------------RLAT--VEQLPAKLRSE--------PLKFDRK----S------GTYRGKV-QN--LTQFYHPL-------DMFGEWNRAYGPAGFLQYQFVIP----TEAVDEF-----KKIIGVIQAS-----------GHY--------SFLNVFKLFGPRNQAPLSFPIPGWNICVDF-PI-KD----GLGKFVS-----ELDR---RVLEFGGRLYT--------AK----------DSRTTAETFH--------------AMYPRVDEWISVRRKVDPLRVFASDMARRLELL-----------------------------------