@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : PA4001: (2016-02-22 )
MKNAMQVLRTWAARGVQWVGVAGVIGLSGAAQAGDYDGSPQVAEFVSEMTRDYGFAGEQLMGLFRDVNRKQSILDAISRPAERVKQWKEYRPIFISDARISRGVDFWNKHAEDLARAEKEYGVPAEIIVSIIGVETFFGRNTGSYRVMDALSTLGFDYPPRADFFRKELREFLLLAREQQVDPLSLTGSYAGAMGLPQFMPSSFRAYAVDFDGDGHINIWSDPTDAIGSVASYFKQHGWVTGEPVVSVAEINDESAESAVTRGVDPTMSLGELRARGWRTHDALRDDQKVTAMRFVGDKGIEYWVGLPNFYVITRYNRSAMYAMAVYQLAGEIARARGAH
Atome Classification :
(20 SA)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10....-.---------...-20..-......30........40........50......--..60........70.-......-.--80...---..-----...--90......-.-----.100.......110.......120.-------..----....130-.......140........---.150...-....160.-.......170----........180......-.190.......200..-----.....210...--.-----....220......-.230.----......-240...-----...-.250....-...260.......270---.......280.......---290---........300.......--310.......320.......330.......340---------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MK
N
A
M
Q
V
L
R
T
W
A
ARG-
V
---------
Q
W
V
-GVAG-VIGLSGAAQAGDYDGS
P
Q
V
A
E
F
V
S
E
M
T
R
DYGF
A
G
--
E
Q
L
M
G
L
F
R
DV
N
R
K
Q
S
-
I
L
D
A
I
S
-
R
--
P
A
E
R
V
---
K
Q
-----
W
K
E--YR
P
I
F
I
SD-
A
-----
R
ISR
G
V
D
F
W
N
K
H
A
E
D
L
A
R
A
E
K
EYGV-------
P
A
----
E
I
I
V
S
I
I
-
G
V
E
T
F
FGR--NTG
S
Y
R
V
M
---
D
A
L
S
T
LG-FDYP
P
-
R
A
-
D
F
F
R
K
E
L
R
E
-----
F
L
L
L
A
R
EQQVD
P
L
SLTG-SYAGAMGL
P
Q
FMPSS
F
-----
R
A
Y
A
V
D
F-DGD--G-----
H
I
N
IWSDP
T
D
A
I
G
-
S
V
A
S
Y
----
F
K
QHGW-VTGEP
V
-----
V
S
V
-
A
EIND
E
S
A
-
E
S
A
V
TRGVDP
T
M
S
L
G
E
---
L
R
ARGWRT
H
D
ALRDDQ
K
---
V
T
----
A
M
R
F
VGDKG
I
E
Y
W
VGLP
N
--
F
Y
V
I
T
R
YNR
S
A
M
Y
A
M
A
V
Y
Q
L
A
G
E
I
A
R
ARGAH-----------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
97.97
100%
-119
- C4 -
4ANR
1
?
A:
[23-322]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
Q
V
A
E
F
V
S
E
M
T
R
D
Y
G
F
A
G
--
E
Q
L
M
G
L
F
R
D
V
N
R
K
Q
S
-
I
L
D
A
I
S
-
R
--
P
A
E
R
V
---
K
Q
-----
W
K
E
--
Y
R
P
I
F
I
S
D
-
A
-----
R
I
S
R
G
V
D
F
W
N
K
H
A
E
D
L
A
R
A
E
K
E
Y
G
V
-------
P
A
----
E
I
I
V
S
I
I
-
G
V
E
T
F
F
G
R
--
N
T
G
S
Y
R
V
M
---
D
A
L
S
T
L
G
-
F
D
Y
P
P
-
R
A
-
D
F
F
R
K
E
L
R
E
-----
F
L
L
L
A
R
E
Q
Q
V
D
P
L
S
L
T
G
-
S
Y
A
G
A
M
G
L
P
Q
F
M
P
S
S
F
-----
R
A
Y
A
V
D
F
-
D
G
D
--
G
-----
H
I
N
I
W
S
D
P
T
D
A
I
G
-
S
V
A
S
Y
----
F
K
Q
H
G
W
-
V
T
G
E
P
V
-----
V
S
V
-
A
E
I
N
D
E
S
A
-
E
S
A
V
T
R
G
V
D
P
T
M
S
L
G
E
---
L
R
A
R
G
W
R
T
---
L
R
D
D
Q
K
---
V
T
----
A
M
R
F
V
G
D
K
G
I
E
Y
W
V
G
L
P
N
--
F
Y
V
I
T
R
Y
N
R
S
A
M
Y
A
M
A
V
Y
Q
L
A
G
E
I
A
R
A
R
G
A
------------------------------------------------------------------------------------------------------------------------------------------------------------------
42
Fugue
84.18
46%
-103
- C4 -
1QUS
3
MLTB_ECOLI
A:
[1-322]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
V
E
P
---------------------------------
Q
H
N
V
M
Q
M
G
G
D
F
A
N
N
P
N
A
Q
Q
F
I
D
K
M
V
N
K
H
G
F
D
R
--
Q
Q
L
Q
E
I
L
S
Q
A
K
R
L
D
S
-
V
L
R
L
M
D
-
N
--
Q
G
P
N
----
G
A
-----
W
L
R
--
Y
R
K
K
F
I
T
P
-
D
-----
N
V
Q
N
G
V
V
F
W
N
Q
Y
E
D
A
L
N
R
A
W
Q
V
Y
G
V
-------
P
P
----
E
I
I
V
G
I
I
-
G
V
E
T
R
W
G
R
--
V
M
G
K
T
R
I
L
---
D
A
L
A
T
L
S
-
F
N
Y
P
R
-
R
A
-
E
Y
F
S
G
E
L
E
T
-----
F
L
L
M
A
R
D
E
Q
D
D
P
L
N
L
K
G
-
S
F
A
G
A
M
G
Y
G
Q
F
M
P
S
S
Y
-----
K
Q
Y
A
V
D
F
-
S
G
D
--
G
-----
H
I
N
L
W
-
D
P
V
D
A
I
G
-
S
V
A
N
Y
----
F
K
A
H
G
W
-
V
K
G
D
Q
V
-----
A
V
M
-
A
N
----
G
Q
-
A
P
G
L
P
N
G
F
K
T
K
Y
S
I
S
Q
---
L
A
A
A
G
L
T
P
Q
Q
P
L
G
N
H
Q
Q
---
A
S
----
L
L
R
L
D
V
G
T
G
Y
Q
Y
W
Y
G
L
P
N
--
F
Y
T
I
T
R
Y
N
H
S
T
H
Y
A
M
A
V
W
Q
L
G
Q
A
V
A
L
A
R
V
Q
------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
83.59
46%
-113
- C4 -
1D0L
2
MLTB_ECOLI
A:
[13-320]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
D
F
A
N
N
P
N
A
Q
Q
F
I
D
K
M
V
N
K
H
G
F
D
R
--
Q
Q
L
Q
E
I
L
S
Q
A
K
R
L
D
S
-
V
L
R
L
M
D
-
N
Q
A
P
---------GPNG
A
W
L
R
--
Y
R
K
K
F
I
T
P
-
D
-----
N
V
Q
N
G
V
V
F
W
N
Q
Y
E
D
A
L
N
R
A
W
Q
V
Y
G
V
-------
P
P
----
E
I
I
V
G
I
I
-
G
V
E
T
R
W
G
R
--
V
M
G
K
T
R
I
L
---
D
A
L
A
T
L
S
-
F
N
Y
P
R
-
R
A
-
E
Y
F
S
G
E
L
E
T
-----
F
L
L
M
A
R
D
E
Q
D
D
P
L
N
L
K
G
-
S
F
A
G
A
M
G
Y
G
Q
F
M
P
S
S
Y
-----
K
Q
Y
A
V
D
F
-
S
G
D
--
G
-----
H
I
N
L
W
-
D
P
V
D
A
I
G
-
S
V
A
N
Y
----
F
K
A
H
G
W
-
V
K
G
D
Q
V
-----
A
V
M
-
A
----
N
G
Q
-
A
P
G
L
P
N
G
F
K
T
K
Y
S
I
S
Q
---
L
A
A
A
G
L
T
P
Q
Q
P
L
G
N
H
Q
Q
---
A
S
----
L
L
R
L
D
V
G
T
G
Y
Q
Y
W
Y
G
L
P
N
--
F
Y
T
I
T
R
Y
N
H
S
T
H
Y
A
M
A
V
W
Q
L
G
Q
A
V
A
L
A
R
--------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
82.82
46%
-111
- C4 -
1D0K
7
MLTB_ECOLI
A:
[13-320]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
D
F
A
N
N
P
N
A
Q
Q
F
I
D
K
M
V
N
K
H
G
F
D
R
--
Q
Q
L
Q
E
I
L
S
Q
A
K
R
L
D
S
-
V
L
R
L
M
D
-
N
Q
A
P
---------GPNG
A
W
L
R
--
Y
R
K
K
F
I
T
P
-
D
-----
N
V
Q
N
G
V
V
F
W
N
Q
Y
E
D
A
L
N
R
A
W
Q
V
Y
G
V
-------
P
P
----
E
I
I
V
G
I
I
-
G
V
E
T
R
W
G
R
--
V
M
G
K
T
R
I
L
---
D
A
L
A
T
L
S
-
F
N
Y
P
R
-
R
A
-
E
Y
F
S
G
E
L
E
T
-----
F
L
L
M
A
R
D
E
Q
D
D
P
L
N
L
K
G
-
S
F
A
G
A
M
G
Y
G
Q
F
M
P
S
S
Y
-----
K
Q
Y
A
V
D
F
-
S
G
D
--
G
-----
H
I
N
L
W
-
D
P
V
D
A
I
G
-
S
V
A
N
Y
----
F
K
A
H
G
W
-
V
K
G
D
Q
V
-----
A
V
M
-
A
----
N
G
Q
-
A
P
G
L
P
N
G
F
K
T
K
Y
S
I
S
Q
---
L
A
A
A
G
L
T
P
Q
Q
P
L
G
N
H
Q
Q
---
A
S
----
L
L
R
L
D
V
G
T
G
Y
Q
Y
W
Y
G
L
P
N
--
F
Y
T
I
T
R
Y
N
H
S
T
H
Y
A
M
A
V
W
Q
L
G
Q
A
V
A
L
A
R
--------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
82.81
46%
-111
- C4 -
1QUS
3
MLTB_ECOLI
A:
[13-320]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
D
F
A
N
N
P
N
A
Q
Q
F
I
D
K
M
V
N
K
H
G
F
D
R
--
Q
Q
L
Q
E
I
L
S
Q
A
K
R
L
D
S
-
V
L
R
L
M
D
-
N
Q-----------GPNG
A
W
L
R
--
Y
R
K
K
F
I
T
P
-
D
-----
N
V
Q
N
G
V
V
F
W
N
Q
Y
E
D
A
L
N
R
A
W
Q
V
Y
G
V
-------
P
P
----
E
I
I
V
G
I
I
-
G
V
E
T
R
W
G
R
--
V
M
G
K
T
R
I
L
---
D
A
L
A
T
L
S
-
F
N
Y
P
R
-
R
A
-
E
Y
F
S
G
E
L
E
T
-----
F
L
L
M
A
R
D
E
Q
D
D
P
L
N
L
K
G
-
S
F
A
G
A
M
G
Y
G
Q
F
M
P
S
S
Y
-----
K
Q
Y
A
V
D
F
-
S
G
D
--
G
-----
H
I
N
L
W
-
D
P
V
D
A
I
G
-
S
V
A
N
Y
----
F
K
A
H
G
W
-
V
K
G
D
Q
V
-----
A
V
M
-
A
----
N
G
Q
-
A
P
G
L
P
N
G
F
K
T
K
Y
S
I
S
Q
---
L
A
A
A
G
L
T
P
Q
Q
P
L
G
N
H
Q
Q
---
A
S
----
L
L
R
L
D
V
G
T
G
Y
Q
Y
W
Y
G
L
P
N
--
F
Y
T
I
T
R
Y
N
H
S
T
H
Y
A
M
A
V
W
Q
L
G
Q
A
V
A
L
A
R
--------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
82.70
46%
-112
- C4 -
1D0M
3
MLTB_ECOLI
A:
[13-320]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
D
F
A
N
N
P
N
A
Q
Q
F
I
D
K
M
V
N
K
H
G
F
D
R
--
Q
Q
L
Q
E
I
L
S
Q
A
K
R
L
D
S
-
V
L
R
L
M
D
-
N
Q-----------GPNG
A
W
L
R
--
Y
R
K
K
F
I
T
P
-
D
-----
N
V
Q
N
G
V
V
F
W
N
Q
Y
E
D
A
L
N
R
A
W
Q
V
Y
G
V
-------
P
P
----
E
I
I
V
G
I
I
-
G
V
E
T
R
W
G
R
--
V
M
G
K
T
R
I
L
---
D
A
L
A
T
L
S
-
F
N
Y
P
R
-
R
A
-
E
Y
F
S
G
E
L
E
T
-----
F
L
L
M
A
R
D
E
Q
D
D
P
L
N
L
K
G
-
S
F
A
G
A
M
G
Y
G
Q
F
M
P
S
S
Y
-----
K
Q
Y
A
V
D
F
-
S
G
D
--
G
-----
H
I
N
L
W
-
D
P
V
D
A
I
G
-
S
V
A
N
Y
----
F
K
A
H
G
W
-
V
K
G
D
Q
V
-----
A
V
M
-
A
----
N
G
Q
-
A
P
G
L
P
N
G
F
K
T
K
Y
S
I
S
Q
---
L
A
A
A
G
L
T
P
Q
Q
P
L
G
N
H
Q
Q
---
A
S
----
L
L
R
L
D
V
G
T
G
Y
Q
Y
W
Y
G
L
P
N
--
F
Y
T
I
T
R
Y
N
H
S
T
H
Y
A
M
A
V
W
Q
L
G
Q
A
V
A
L
A
R
--------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
82.52
46%
-107
- C4 -
1QDR
3
MLTB_ECOLI
A:
[13-320]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
D
F
A
N
N
P
N
A
Q
Q
F
I
D
K
M
V
N
K
H
G
F
D
R
--
Q
Q
L
Q
E
I
L
S
Q
A
K
R
L
D
S
-
V
L
R
L
M
D
-
N
Q-----------GPNG
A
W
L
R
--
Y
R
K
K
F
I
T
P
-
D
-----
N
V
Q
N
G
V
V
F
W
N
Q
Y
E
D
A
L
N
R
A
W
Q
V
Y
G
V
-------
P
P
----
E
I
I
V
G
I
I
-
G
V
E
T
R
W
G
R
--
V
M
G
K
T
R
I
L
---
D
A
L
A
T
L
S
-
F
N
Y
P
R
-
R
A
-
E
Y
F
S
G
E
L
E
T
-----
F
L
L
M
A
R
D
E
Q
D
D
P
L
N
L
K
G
-
S
F
A
G
A
M
G
Y
G
Q
F
M
P
S
S
Y
-----
K
Q
Y
A
V
D
F
-
S
G
D
--
G
-----
H
I
N
L
W
-
D
P
V
D
A
I
G
-
S
V
A
N
Y
----
F
K
A
H
G
W
-
V
K
G
D
Q
V
-----
A
V
M
-
A
----
N
G
Q
-
A
P
G
L
P
N
G
F
K
T
K
Y
S
I
S
Q
---
L
A
A
A
G
L
T
P
Q
Q
P
L
G
N
H
Q
Q
---
A
S
----
L
L
R
L
D
V
G
T
G
Y
Q
Y
W
Y
G
L
P
N
--
F
Y
T
I
T
R
Y
N
H
S
T
H
Y
A
M
A
V
W
Q
L
G
Q
A
V
A
L
A
R
--------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
HHSearch
82.43
47%
-102
- C4 -
1QUS
3
MLTB_ECOLI
A:
[8-320]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
M
Q
M
G
G
D
F
A
N
N
P
N
A
Q
Q
F
I
D
K
M
V
N
K
H
G
F
D
R
--
Q
Q
L
Q
E
I
L
S
Q
A
K
R
L
D
S
-
V
L
R
L
M
D
-
N
--
Q
----GPN
G
A
-----
W
L
R
--
Y
R
K
K
F
I
T
P
-
D
-----
N
V
Q
N
G
V
V
F
W
N
Q
Y
E
D
A
L
N
R
A
W
Q
V
Y
G
V
-------
P
P
----
E
I
I
V
G
I
I
-
G
V
E
T
R
W
G
R
--
V
M
G
K
T
R
I
L
---
D
A
L
A
T
L
S
-
F
N
Y
P
R
-
R
A
-
E
Y
F
S
G
E
L
E
T
-----
F
L
L
M
A
R
D
E
Q
D
D
P
L
N
L
K
G
-
S
F
A
G
A
M
G
Y
G
Q
F
M
P
S
S
Y
-----
K
Q
Y
A
V
D
F
-
S
G
D
--
G
-----
H
I
N
L
W
-
D
P
V
D
A
I
G
-
S
V
A
N
Y
----
F
K
A
H
G
W
-
V
K
G
D
Q
V
A
V
M
A
N
G
Q
A
-
P
G
L
P
N
G
F
----------
K
T
K
Y
S
I
S
Q
---
L
A
A
A
G
L
T
P
Q
Q
P
L
G
N
H
Q
Q
---
A
S
----
L
L
R
L
D
V
G
T
G
Y
Q
Y
W
Y
G
L
P
N
--
F
Y
T
I
T
R
Y
N
H
S
T
H
Y
A
M
A
V
W
Q
L
G
Q
A
V
A
L
A
R
--------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
82.37
46%
-109
- C4 -
1LTM
3
MLTB_ECOLI
A:
[11-318]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
D
F
A
N
N
P
N
A
Q
Q
F
I
D
K
M
V
N
K
H
G
F
D
R
--
Q
Q
L
Q
E
I
L
S
Q
A
K
R
L
D
S
-
V
L
R
L
M
D
-
N
------------GPNG
A
W
L
R
--
Y
R
K
K
F
I
T
P
-
D
-----
N
V
Q
N
G
V
V
F
W
N
Q
Y
E
D
A
L
N
R
A
W
Q
V
Y
G
V
-------
P
P
----
E
I
I
V
G
I
I
-
G
V
E
T
R
W
G
R
--
V
M
G
K
T
R
I
L
---
D
A
L
A
T
L
S
-
F
N
Y
P
R
-
R
A
-
E
Y
F
S
G
E
L
E
T
-----
F
L
L
M
A
R
D
E
Q
D
D
P
L
N
L
K
G
-
S
F
A
G
A
M
G
Y
G
Q
F
M
P
S
S
Y
-----
K
Q
Y
A
V
D
F
-
S
G
D
--
G
-----
H
I
N
L
W
-
D
P
V
D
A
I
G
-
S
V
A
N
Y
----
F
K
A
H
G
W
-
V
K
G
D
Q
V
-----
A
V
M
-
A
----
N
G
Q
-
A
P
G
L
P
N
G
F
K
T
K
Y
S
I
S
Q
---
L
A
A
A
G
L
T
P
Q
Q
P
L
G
N
H
Q
Q
---
A
S
----
L
L
R
L
D
V
G
T
G
Y
Q
Y
W
Y
G
L
P
N
--
F
Y
T
I
T
R
Y
N
H
S
T
H
Y
A
M
A
V
W
Q
L
G
Q
A
V
A
L
A
R
--------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
82.30
46%
-107
- C4 -
1QDT
3
MLTB_ECOLI
A:
[13-320]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
D
F
A
N
N
P
N
A
Q
Q
F
I
D
K
M
V
N
K
H
G
F
D
R
--
Q
Q
L
Q
E
I
L
S
Q
A
K
R
L
D
S
-
V
L
R
L
M
D
-
N
Q-----------GPNG
A
W
L
R
--
Y
R
K
K
F
I
T
P
-
D
-----
N
V
Q
N
G
V
V
F
W
N
Q
Y
E
D
A
L
N
R
A
W
Q
V
Y
G
V
-------
P
P
----
E
I
I
V
G
I
I
-
G
V
E
T
R
W
G
R
--
V
M
G
K
T
R
I
L
---
D
A
L
A
T
L
S
-
F
N
Y
P
R
-
R
A
-
E
Y
F
S
G
E
L
E
T
-----
F
L
L
M
A
R
D
E
Q
D
D
P
L
N
L
K
G
-
S
F
A
G
A
M
G
Y
G
Q
F
M
P
S
S
Y
-----
K
Q
Y
A
V
D
F
-
S
G
D
--
G
-----
H
I
N
L
W
-
D
P
V
D
A
I
G
-
S
V
A
N
Y
----
F
K
A
H
G
W
-
V
K
G
D
Q
V
-----
A
V
M
-
A
----
N
G
Q
-
A
P
G
L
P
N
G
F
K
T
K
Y
S
I
S
Q
---
L
A
A
A
G
L
T
P
Q
Q
P
L
G
N
H
Q
Q
---
A
S
----
L
L
R
L
D
V
G
T
G
Y
Q
Y
W
Y
G
L
P
N
--
F
Y
T
I
T
R
Y
N
H
S
T
H
Y
A
M
A
V
W
Q
L
G
Q
A
V
A
L
A
R
--------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
82.14
46%
-108
- C4 -
1QUT
2
MLTB_ECOLI
A:
[13-320]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
D
F
A
N
N
P
N
A
Q
Q
F
I
D
K
M
V
N
K
H
G
F
D
R
--
Q
Q
L
Q
E
I
L
S
Q
A
K
R
L
D
S
-
V
L
R
L
M
D
-
N
Q-----------GPNG
A
W
L
R
--
Y
R
K
K
F
I
T
P
-
D
-----
N
V
Q
N
G
V
V
F
W
N
Q
Y
E
D
A
L
N
R
A
W
Q
V
Y
G
V
-------
P
P
----
E
I
I
V
G
I
I
-
G
V
E
T
R
W
G
R
--
V
M
G
K
T
R
I
L
---
D
A
L
A
T
L
S
-
F
N
Y
P
R
-
R
A
-
E
Y
F
S
G
E
L
E
T
-----
F
L
L
M
A
R
D
E
Q
D
D
P
L
N
L
K
G
-
S
F
A
G
A
M
G
Y
G
Q
F
M
P
S
S
Y
-----
K
Q
Y
A
V
D
F
-
S
G
D
--
G
-----
H
I
N
L
W
-
D
P
V
D
A
I
G
-
S
V
A
N
Y
----
F
K
A
H
G
W
-
V
K
G
D
Q
V
-----
A
V
M
-
A
----
N
G
Q
-
A
P
G
L
P
N
G
F
K
T
K
Y
S
I
S
Q
---
L
A
A
A
G
L
T
P
Q
Q
P
L
G
N
H
Q
Q
---
A
S
----
L
L
R
L
D
V
G
T
G
Y
Q
Y
W
Y
G
L
P
N
--
F
Y
T
I
T
R
Y
N
H
S
T
H
Y
A
M
A
V
W
Q
L
G
Q
A
V
A
L
A
R
--------------------------------------------------------------------------------------------------------------------------------------------------------------------
44
Fugue
47.49
22%
-43
- C3 -
4UY5
2
EGTD_MYCS2
A:
[2-327]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
L
S
L
A
N
YLA
A
D
S
A
A
E
A
L
R
R
D
V
R
A
G
-
L
T
AAP
K
S
L
P
P
K
W
F
Y
D
A
V
G
-
S
D
L
F
D
Q
I
T
R
L
P
E
Y
Y
P
T
R
T
E
A
Q
I
L
R
T
R
S
A
E
I
I
A
A
A
GA
D
T
L
V
E
L
G
S
G
T
S
E
K
T
R
M
L
L
D
A
--
M
R
--
D
A
E
L
L
---
R
--------
R
--
F
I
P
F
D
V
D
A
-
G
-----
V
L
R
S
A
G
A
A
I
G
A
E
Y
P
G
I
----------------------
E
I
D
A
V
C
G
-
D
F
E
E
H
L
G
K
IP
H
V
G
R
R
L
V
V
---
F
L
G
S
T
I
G
N
L
T
P
A
P
-
R
A
-
E
F
L
S
T
L
A
D
T
LQPG
D
S
L
L
L
G
T
D
L
V
K
D
T
G
R
L
V
R
-
A
Y
D
D
A
A
G
V
T
A
A
F
N
R
N
V
L
A
V
V
N
R
E
L
S
A
D
F
-
D
L
D
A
F
E
-----
H
V
A
K
W
N
S
D
E
E
R
I
E
M
W
L
R
A
R
----
T
A
Q
H
V
R
-
V
--
A
A
L
-----
D
L
E
-
V
D
F
A
A
G
E
E
M
L
T
E
V
S
C
K
F
R
P
E
N
V
V
A
E
---
L
A
E
A
G
L
R
Q
T
H
W
W
T
D
P
A
---------------
G
D
F
G
L
S
L
A
V
R
L
E
H
--
H
H
----------------------------
H
-----------------------------------------------------------------------------------------------------------------------------------------------------------------
48
Fugue
45.16
18%
-40
- C3 -
4RHJ
1
?
A:
[19-318]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SHM
F
S
K
F
L
M
N
V
K
G
V
T
P
R
G
-
S
---------
D
W
A
-
N
R
L
G
-
P
V
A
L
F
G
Y
G
A
-----
G
M
P
R
R
A
P
L
L
D
F
F
L
Q
S
P
-------------
R
D
C
D
H
Y
A
E
-
L
T
I
H
D
K
-
G
--
P
I
E
C
P
---
P
E
-----
T
V
M
--
F
M
P
V
L
N
C
G
-
Q
-----
M
L
D
E
A
A
G
T
E
T
P
T
S
D
E
W
Y
L
G
S
L
E
A
S
T
-------
E
L
L
E
K
G
Y
V
P
V
S
V
G
-
G
D
G
S
A
T
L
S
--
M
V
E
A
Y
K
R
L
FPS
D
D
I
V
I
V
H
-
F
S
A
R
P
-
S
V
-
S
D
P
R
S
P
L
R
V
-----
L
L
D
------------
K
G
-
L
L
K
G
V
V
S
V
G
N
R
Q
V
S
S
E
-----
D
R
K
V
R
K
L
-
H
K
-------------------------
M
F
Y
----
M
D
M
R
D
I
-
R
N
D
Y
P
V
F
----
I
S
I
D
A
S
V
L
D
P
A
F
-
A
P
A
V
D
S
P
V
-------------
A
G
G
L
S
T
R
D
L
L
H
I
M
N
G
---
I
R
----
G
P
K
V
V
G
---
I
D
V
Y
-
G
Y
N
P
--
D
L
D
V
Y
R
K
D
N
V
G
L
T
A
I
A
L
S
K
I
I
K
E
G
I
L
K
---------------------------------------------------------------------------------------------------------------------------------------------------------------------
39
HHSearch
41.01
18%
-62
- C4 -
3BKH
-
?
A:
[102-187]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
N
A
V
E
N
A
T
G
V
-------
R
S
----
Q
L
L
L
T
F
A
-
S
I
E
S
A
F
D
Y
--
E
I
K
-------------------------------------------------------
A
-
K
T
S
S
A
T
G
W
F
Q
F
L
T
G
T
W
-----
K
T
M
I
E
N
Y
G
M
K
Y
--
G
VLTDP
T
G
A
L
R
K
D
P
R
I
S
A
L
-
M
G
A
E
L
----
I
K
E
N
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
49
Fugue
39.83
14%
-49
- C1 -
3UGM
-
PTHX1_XANOP
A:
[169-1048]
KPKVRELVAHIVALSQHPAALGTVAVTYQHIITALAT
H
E
D
I
V
G
V
G
KQWSG
A
R
A
L
E
A
L
L
T
D
A
G
E
L
RGPPLQLDT
G
Q
L
V
K
I
A
K
R
GG
V
T
A
M
E
A
V
H
A
SRNALTPLNLT
P
A
Q
V
V
A
I
A
SNNG
G
K
Q
A
L
E
T
V
Q
R
L
L
P
V
L
C
Q
A
HGLTPA
Q
V
V
A
I
A
SHDG
G
K
Q
A
L
E
T
M
Q
R
L
L
P
V
L
C
Q
A
HGLP
P
D
Q
V
V
A
I
A
SNIG
G
K
Q
A
L
E
T
V
Q
R
L
L
PVLCQAHGLT
P
D
Q
V
V
A
I
A
SHGG
G
K
Q
A
L
E
T
V
Q
R
LLPVLCQAHGLT
P
D
Q
V
V
A
I
A
SHDG
G
K
Q
A
L
E
T
V
Q
R
LLPVLCQAHGLT
P
D
Q
V
V
A
I
A
SNGG
G
K
Q
A
L
E
T
V
Q
R
L
L
P
V
L
C
Q
AHGLT
P
D
Q
V
V
A
I
A
S
NGG
K
Q
A
L
E
T
V
Q
R
LLPVLCQAHGLT
P
D
Q
V
V
A
I
A
SHDG
G
K
Q
A
L
E
T
V
Q
R
LL
P
V
L
C
Q
THGLT
P
A
Q
V
V
A
I
A
SHDG
G
K
Q
A
L
E
T
V
Q
Q
L
L
P
V
L
-
C
---------
Q
A
H
-
G
L
T
P
-
D
Q
V
V
A
I
A
S
N
I
G
G
K
Q
A
L
A
T
V
Q
R
L
L
P
V
L
C
Q
A
H
G
L
T
P
--
D
Q
V
V
A
I
A
S
N
-
G
G
G
K
Q
-
A
L
E
T
V
Q
-
R
--
L
L
P
V
L
---
C
Q
-----
A
H
G
--
L
T
P
D
Q
V
V
A
I
A
-----
S
N
G
G
G
K
Q
A
L
E
T
V
Q
R
L
L
P
V
L
C
Q
A
H
G
L
-------
T
Q
----
V
Q
V
V
A
I
A
-
S
---------
N
I
G
G
K
Q
A
L
---
E
T
V
Q
R
L
L
-
P
V
L
C
Q
-
A
H
-
G
L
T
P
A
Q
V
V
A
-----
I
A
-----------
S
H
D
G
-
G
K
Q
A
L
E
T
V
Q
R
L
L
P
V
L
C
-----
Q
A
H
--
G
L
-
T
P
D
--
Q
-----
V
V
A
I
A
S
N
G
-
G
G
K
Q
-
A
L
E
T
V
----
Q
R
L
L
P
G
-
L
T
Q
E
Q
V
-----
V
A
I
-
A
S
N
N
G
G
K
Q
-
A
L
E
T
V
Q
R
L
L
P
V
L
C
------------
Q
A
H
G
L
T
P
D
Q
V
V
---
A
I
----
A
S
N
G
G
G
K
Q
A
L
E
T
V
Q
R
L
L
P
--
V
L
C
----
Q
A
H
G
L
T
P
A
Q
V
V
A
I
A
S
N
I
G
G
K
Q
A
L
E
T
V
Q
R
L
L
P
V
L
C
Q
DHGLT
L
A
Q
V
V
A
I
A
SNIG
G
K
Q
A
L
E
T
V
Q
R
L
LPVLCQGLT
Q
D
Q
V
V
A
I
A
SNIG
G
K
Q
A
L
E
T
V
Q
R
LLPVLCQDHGLT
P
D
Q
V
V
A
I
A
S
NIGGKQ
A
L
E
T
V
Q
R
L
L
PVLCQDHGLT
L
D
Q
V
V
A
I
A
S
N
GGK
Q
A
L
E
T
V
Q
R
L
L
P
V
L
C
Q
DHGLTPDQVVAIASNSG
45
Fugue
39.53
12%
-42
* C3 *
4EHX
11
LPXK_AQUAE
A:
[1-315]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MLRSSL
L
P
F
S
Y
L
Y
E
K
I
I
N
F
R
N
T
L
Y
D
K
G
-
F
---------
L
K
I
-
K
K
L
P
-
V
P
V
I
S
V
G
N
L
S
V
G
G
S
G
K
T
S
F
V
M
Y
L
A
D
L
-----
L
K
D
--
K
R
V
C
I
L
S
R
G
Y
K
R
K
S
K
-
G
T
L
I
V
S
-
E
--
Y
G
N
L
K
---
V
S
-----
W
E
E
AG
D
E
P
Y
L
M
A
K
-
L
-----
L
P
H
V
S
V
V
A
S
E
D
R
Y
K
G
G
L
L
A
L
E
K
L
S
P
-------------
E
V
F
I
L
D
D
-
G
F
Q
H
R
K
L
H
--
R
D
L
N
I
L
L
L
---
K
K
K
D
L
K
D
-
R
L
L
P
A
--------
G
N
L
R
E
-------
P
L
K
E
I
R
R
A
D
A
L
V
L
T
Y
-
Q
E
V
E
P
F
E
F
-------------------
F
-
T
G
K
--
P
-----
T
F
K
M
F
R
E
F
C
C
L
L
N
-
S
-
D
F
E
----
E
V
P
F
D
I
-
L
K
E
R
E
V
-----
I
A
F
-
S
G
L
G
D
N
G
Q
-
F
R
K
V
L
K
N
L
G
I
K
V
K
E
F
M
---
S
F
P
D
H
Y
D
Y
S
D
F
T
P
E
E
G
E
I
Y
L
T
T
----
P
K
D
L
I
K
L
Q
G
Y
E
N
V
F
A
L
N
F
--
K
V
K
L
E
R
E
E
K
L
K
K
L
I
Y
R
I
F
Y
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
HHSearch
37.95
16%
-41
- C4 -
3GXR
2
?
A:
[20-125]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
---
Q
D
-----
K
L
E
--
Y
D
G
V
R
A
S
H
-
T
-----
M
A
Q
T
D
A
G
R
M
E
K
Y
K
S
F
I
N
N
V
A
K
K
H
V
V
-------
D
P
----
A
V
I
A
A
I
I
-
S
R
E
S
R
A
G
N
--
V
I
F
N
T
T
P
------------------------------------------------
P
G
W
G
-
D
N
Y
N
G
F
G
L
M
Q
V
D
K
R
Y
H
-----
E
P
R
------------------
G
A
W
-
N
S
E
E
H
I
D
-
Q
A
T
G
I
----
L
V
N
F
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
HHSearch
37.93
16%
-56
- C4 -
1GBS
-
LYG_CYGAT
A:
[26-124]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
S
--
Y
C
G
V
P
A
S
K
-
T
-----
I
A
E
R
D
L
K
A
M
D
R
Y
K
T
I
I
K
K
V
G
E
K
L
C
V
-------
E
P
----
A
V
I
A
G
I
I
-
S
R
E
S
H
A
G
K
--
V
L
K
N
G
----------------------------------------------------
W
G
-
D
R
G
N
G
F
G
L
M
Q
V
D
K
R
S
H
-----
K
P
Q
G
------------------
T
W
-
N
G
E
V
H
I
T
-
Q
G
T
T
I
----
L
T
D
F
I
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
47
Fugue
37.50
17%
-42
- C2 -
1GPD
2
G3P_HOMAM
G:
[1-333]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKIGINGF
G
R
I
G
R
L
V
L
R
A
A
L
S
C
G
A----------
Q
V
V
-
A
V
N
D
P
F
I
A
L
E
Y
M
V
Y
M
F
K
Y
D
S
T
H
G
--
V
F
K
G
E
V
K
M
E
----------
D
G
A
L
V
V
D
G
K
K
I
T
-
V
F
N
E
-
M
-
K
--
P
E
N
I
-----
P
-----
W
S
K
--
A
G
A
E
Y
I
V
E
-
S
TGVFT
T
I
E
K
A
S
A
H
F
K
G
G
A
K
K
V
V
I
S
A
P
S
A
D
A
-------
P
------
M
F
V
C
G
V
-
N
L
E
K
Y
-----
S
K
D
-
M
T
V
V
---
S
N
A
S
C
T
T
-
N
C
L
A
P
-
V
A
-
K
V
L
H
E
N
---------
F
E
I
V
E
G
L
M
T
T
V
H
A
V
T
A
-
T
Q
K
T
V
D
G
-----
P
S
A
K
-----
D
W
R
G
G
R
G
-
A
A
Q
--
N
-----
I
I
P
S
S
T
G
A
A
K
A
V
G
-
K
V
I
P
E
LDGK
L
T
G
M
A
F
-
R
V
P
T
P
D
-----
V
S
V
-
V
D
L
T
V
R
L
G
-
K
E
C
S
Y
D
D
I
K
A
A
M
K
T
A
S
EGP
L
Q
G
F
L
G
Y
T
E
D
D
V
V
S
S
-
D
---
F
I
GDNR
S
S
I
F
D
A
K
A
G
I
Q
L
----
S
K
TF
V
K
V
V
S
W
Y
D
N
E
F
G
Y
S
Q
R
V
I
D
L
L
K
H
M
Q
K
V
D
S
A
------------------------------------------------------------------------------------------------------------------------------------------------------------------
43
Fugue
37.39
17%
-49
* C2 *
4RGP
6
?
A:
[2-256]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
A
T
E
Q
E
T
L
T
I
L
L
D
V
Y
-------
A
Y
Y
Q
A
Y
Q
I
V
K
A
S
Q
F
-
F
S
D
D
I
I
-
F
--
L
L
E
L
L
---
K
E
-----
R
R
E
--
L
N
------------------
V
D
F
L
F
Q
N
Q
V
H
L
Q
E
L
E
L
T
Y
H
I
SLLDNA
Y
E
E
----
E
L
L
A
N
Y
I
M
D
L
E
A
K
L
-
R
--
N
D
H
I
I
D
F
V
---
R
S
V
S
P
I
L
-
Y
R
L
L
-
M
R
L
M
Q
S
Q
V
A
D
I
N
D
-----
Y
I
Y
D
A
K
N
D
Q
Y
D
T
W
K
F
D
K
M
H
------------
D
S
A
-----
N
P
F
V
Q
N
F
-
V
A
K
--
G
-----
R
-----
D
S
K
I
T
S
R
-
S
L
A
D
F
----
I
Q
L
T
D
L
P
Q
A
I
K
D
N
-----
I
L
L
-
L
R
D
F
E
K
S
V
-
R
N
P
L
A
H
L
I
K
P
F
D
E
E
E
L
---
H
R
T
T
G
F
S
S
Q
T
F
L
E
K
I
I
Q
---
L
A
----
V
F
S
-----
G
I
H
Y
---------------
D
N
D
K
F
Y
F
D
K
V
N
E
L
I
K
R
I
Y
Q
----------------------------------------------------------------------------------------------------------------------------------------------------------------------