@TOME V2.3
(Nov 2016)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : PA4304: (2016-02-26 )
MHRSTGIGVSRWLGGLLGVALALPALALPQGCIELLAQAPRVDVVQGQQRDLRLAVPIERLAIGDPKIADVQLLDRRGFLVTGKEQGSTSLLIWTGCSPEPLRSLVEVEGRGSVDTRGAPAFTVGAAEELPNQVQTDIRFVEVSRSKLKQASTSFVRRGGNLWVLGAPGSLGDIKVNADGSGLGGTFGTGSSGFNLIFGGGKWLSFMNALEGSGFAYTLARPSLVAMSGQSASFLAGGEFPIPVPNGTNDNVTIEYKEFGIRLTLTPTVMNNRRIALKVAPEVSELDYSAGIQSGGVAVPALRVRRTDTSVMLADGESFVISGLTSSNSVSNVDKFPWLGDIPILGAFFRSTKLDKDDRELLMIVTPHLVQPLAADAQLPDLPGEGLRHYDPGFSRLYFLERGEYDGQQNDTGLSD
Atome Classification :
(20 SA)
.........10.......---.20...----.....30........40--......-...50.....--...-------60...-.....-----70.---...-...----.80......-.-.90........100.......110.......120...-....130.-------......140.......150..-------..--....160.......170---------.......180-......----.190-...----....200..-.-.....210......------.-----------220.-......230.....-..-240..-.....250..---....----.------260-...-.-....270.......280.......290.......300......------..310.......320.......330...--.-----....----340-.........350----.-...-----...-..360-----.......370....-...380..----...-.-.390.......---.400--------------------...-....410....-----------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
MHRSTGI
G
V
S
R
W
L
G
G
L
L
G
---
V
A
L
A
L
P
----
A
LAL
P
Q
G
C
I
E
L
L
AQAP---RV
D
V
VQ-GQQR
D
L
R
L
AV--
P
I
E
-------
R
LAIG-DPKI
A
-----
D
V
Q
---
L
LD-RR
G
----
F
L
V
TGKEQG-
S
-
T
S
L
L
I
W
TGC
S
P
E
P
L
R
S
L
V
E
VEGRGSVDTRGA
P
A
F
TVG-
A
A
E
EL
P
N
Q
-------
V
Q
TD
I
R
F
V
E
V
S
R
S
K
L
K
Q
A
-
S
T
-------
S
F
--
V
RRGG
N
L
W
V
LGAPGSL
G
---------
D
I
K
V
NADGSG-LGGTFG----TGSS-G
F
N
----
L
I
FGG
G
-
K
W
-
L
-
S
F
M
N
ALEGS
G
F
A
Y
T
------L-----------AR
P
S
-
L
V
A
MSGQS
A
S
FLAG-GE-FPIPV-PNGTND
N
V
T
I
---
E
Y
KE----F------
G
I
--
R
L
T
-
L
-
T
P
TVMNN
R
R
I
A
L
K
VAPE
V
S
EL
D
Y
SAGIQSG
G
V
AV
P
A
-
L
R
V
RRT------D
T
S
V
M
L
ADGE
S
F
V
I
SGLTSSNSV-SNVD--K-----FPWL----G---D
I
P
I
L
G
A
F
F
R
------S-TKL-----DKD-D
R
E
L
L
-----
M
I
VT
P
H
LVQ
P
L
AAD-AQLPDLPG----EGL-R-HY-DPGF
S
R
L
Y
---
F
L
ER--------------------GEY-DGQQNDTGLSD-----------
29
Fugue
93.93
20%
-52
- C5 -
4MR0
7
PFBA_STRR6
A:
[114-571]
----
T
A
L
S
V
K
D
Y
--
G
A
V
G
---
D
G
I
H
D
D
----
R
Q
A
I
-
Q
D
A
I
D
A
A
A
Q
G
L
GGG
N
V
Y
F
P
E
-
G
T
Y
L
V
K
E
I
V
F
--
L
K
S
-------
H
T
H
L
E
L
N
E
K
A
T
-----
I
L
N
---
G
I
N
-
I
K
N
HPSI
V
F
M
T
G
L
F
T
D
-
D
-
G
A
Q
V
E
W
G
P
------
T
E
D
I
S
Y
S
G
-
G
T
I
D
M
N
G
A
L
N
E
E
G
T
-
K
A
K
N
L
P
L
--------
I
N
S
S
G
A
F
A
I
G
N
S
N
N
V
T
I
K
-
N
V
-------
T
F
K
D
S
Y
Q
G
H
A
I
Q
I
A
G
S
K
N
---------------
V
L
V
D
N
S
R
-
F
L
G
Q
A
L
----
P
K
T
M
-
K
D
G
----
Q
I
I
S
---
K
E
-
S
-
I
Q
I
E
P
L
T
R
K
G
F
P
Y
A
------
L
NDDG
K
K
S
E
NVT
I
Q
N
S
-
Y
F
G
K
S
D
K
S
G
E
L
V
T
A
I
G
T
-
H
Y
Q
T
L
-
S
T
Q
N
P
S
N
I
K
I
---
L
N
N
H
----
F
DNMMYA
G
V
--
R
F
T
G
F
-
T
D
V
L
I
K
G
N
R
F
D
K
K
V
K
G
E
S
V
H
Y
R
-----
E
S
G
A
A
L
V
N
A
-
Y
S
Y
K
N
T
KDLLDL
N
K
Q
V
V
I
A
E
N
I
F
N
I
A
D
P
K
T
K
A
I
R
V
-
A
K
-
D
--
S
-----
A
E
Y
L
----
G
KVS
D
I
T
V
T
K
N
V
I
N
N
N----
S
-
K
E
T
-----
E
Q
P
-
N
I
E
L
L
RVSDN
L
V
V
S
E
N
S
I
F
G
G
K
E
G
-
I
V
I
E
D
S
K
G
K
I
T
V
L
N
N
-
Q
-
F
Y
-
N
L
S
G
K
Y
I
S
---
F
I
K
S
N
A
N
G
K
E
P
VISD
G
N
F
N
I
V
T
E
N
G
L
Y
-
K
I
V
T
N
N
L
S
D
K
N
-----------
21
Fugue
82.07
21%
-6
- C8 -
4YD8
-
PTHB1_HUMAN
A:
[7-373]
L
F
K
A
-----
R
D
W
W
S
T
I
L
G
--------
D
----
K
E
E
F
D
Q
G
C
L
C
L
A
---------
N
V
D
N
-
S
G
N
G
Q
---------
D
-------
K
I
I
V
G
------------------------------------
S
-
F
M
G
Y
L
R
I
F
---
S
P
H
P
A
K
T
-----
G
D
G
A
Q
A
E
D
-----------
L
L
L
E
V
D
-------
L
R
D
P
V
L
Q
V
E
V
G
K
F
V
S
G
T
E
M
L
H
-------
L
A
--
V
L
H
S
R
K
L
C
V
Y
S
V
S
G
T
L
G
NQ
C
Q
M
K
L
M
Y
E
H
N
L
Q
R
T
A
C
N
M
T
Y
G
S
F
G
-----
G
V
K
-
G
R
D
----
L
I
C
I
Q
S
M
D
G
M
L
M
V
F
E
Q
E
S
Y
A
F
G
------------------------------------
R
F
L
P
G
-
F
L
-
L
P
G
P
L
-
A
Y
S
S
R
T
D
--------------
S
------
F
L
--
T
V
S
-
S
-
C
Q
Q
V
E
S
Y
K
Y
Q
V
L
A
F
A
T
D
A
D
K
L
V
V
D
W
T
L
N
I
G
E
Q
A
L
D
I
-
C
I
V
S
F
S
------
A
S
S
V
F
V
L
G
E
R
N
F
F
C
L
K
D
N
G
Q
I
R
F
M
K
K
L
D
--
W
SPSCF
L
P
Y
C
SVSE
G
---
T
I
N
T
L
I
G
N
H
N
------
N
M
L
H
I
-----
Y
Q
D
-
V
T
L
K
W
-----
A
T
Q
L
P
H
I
--
P
V
A
V
R
V
G
C
L
H
D
L
K
G
----
V
I
V
-
T
-
L
S
-
D
D
G
H
L
Q
C
S
---
Y
L
G
T
--------------------
D
P
S
-
L
F
Q
A
P
-----------------
28
Fugue
80.03
18%
-42
- C7 -
4R2F
1
?
A:
[38-431]
--
G
A
I
K
F
W
D
M
P
W
A
T
P
A
Y
N
---
D
A
A
K
K
I
----
A
E
G
F
S
G
A
-------
N
S
---
K
A
T
Y
Q
I
-
I
Q
W
N
N
F
Y
Q
T
F
--
S
S
A
-------
I
A
S
K
T
-
G
P
A
V
S
T
G
G
GF
Q
A
F
---
Q
F
E
-
E
Q
G
----
Q
I
A
Y
A
--------------------
D
K
V
I
E
K
L
K
S
N
G
Q
F
D
D
-----
F
L
P
G
-
V
V
E
P
F
K
T
S
KGYV
A
V
P
W
Q
L
D
I
R
P
L
W
Y
R
K
S
L
F
E
K
A
-
G
V
GVPTD
W
A
S
L
--
L
E
A
G
K
K
L
K
G
V
G
A
V
G
---------------------------
F
A
----
T
G
S
G
-
A
G
N
----
N
I
---
G
-
N
H
-
L
-
M
I
M
M
M
L
N
N
G
G
G
V
F
T
KDGELD
V
-----------
L
N
D
R
-
N
V
E
A
V
E
F
L
L
E
L
V
S
N
-
G
V
-
I
D
P
A
A
-
V
S
Y
T
T
D
N
L
N
A
---
Q
W
K
D
SKAA
Y
------
G
M
---
L
T
-
L
G
V
P
E
R
V
G
D
T
S
G
D
I
V
V
A
S
P
I
A
----
G
P
H
G
D
K
A
A
L
I
F
P
N
-
N
I
M
M
Y
T
------
N
T
P
S
Q
E
A
-
S
E
E
F
V
V
Y
Y
L
G
K
---
L
-
K
E
L
W
--
Q
-----
Q
K
L
M
----
N
---
A
L
P
V
F
K
S
I
T
E
------
M
-
P
E
F
-----
T
A
D
-
P
N
N
V
K
-----
I
V
N
E
Y
V
P
I
A
K
T
F
A
--
S
Q
G
T
A
L
S
-----
A
N
L
-
A
-
A
L
-
D
G
G
Q
A
L
N
Q
---
F
T
Q
T
--------------------
V
L
T
-
G
K
T
D
A
K
S
A
L
T
A
F
D
T
G
L
K
S
V
LKK
24
Fugue
77.15
17%
-40
* C8 *
2GSZ
-
?
A:
[1-349]
---------
E
L
K
I
L
E
I
I
K
---
E
A
I
E
L
G
----
A
-----
S
D
I
H
L
T
A
G
A
P
---
P
A
V
R
I
D
-
G
Y
I
K
F
L
K
-------
D
-------
F
P
R
L
T
-
P
E
D
T
Q
-----
K
L
A
---
Y
S
V
M
S
E
K
----
H
R
Q
K
L
E
E
N
G
-
Q
-
V
D
F
---------------------
S
F
G
V
R
G
V
G
R
F
R
A
N
-
V
F
Y
Q
-
R
G
S
-------
V
A
A
A
L
R
S
L
P
A
E
I
P
E
F
K
K
L
------------------------
G
L
P
D
K
V
L
---------
E
L
C
H
-------------------
R
K
M
G
L
I
----
L
V
T
G
P
-------------
T
G
S
G
K
S
T
T
------
I
-----------
A
--
S
M
I
D
Y
I
N
Q
T
K
S
Y
H
I
I
T
-
I
E
-
D
P
I
E
Y
-
V
F
-
K
H
K
K
S
I
V
---
N
Q
R
E
----
V
------
G
E
--
D
-----
T
K
S
F
A
D
A
L
R
A
A
L
R
E
D
P
D
V
I
F
V
-------------
G
E
M
R
D
L
E
T
V
------
E
T
A
L
R
A
A
E
T
G
H
L
V
F
G
T
L
H
T
N
T
A
I
-
D
T
I
H
--
R
I
V
D
I
-
F
P
L
N
----
Q
---
Q
E
Q
V
R
I
V
L
S
F
ILQ
G
I
I
S
-
Q
R
L
L
P
K
IG
G
G
R
-
V
L
A
Y
E
-----
L
L
I
P
N
T
A
I
R
N
L
I
R
E
-
N
K
L
Q
Q
V
Y
S
------
L
M
Q
M
Q
T
M
N
Q
T
L
Y
K
L
Y
K
Q
G
L
I
T
L
--------------------
E
D
A
M
E
A
S
P
D
P
K
E
L
E
R
-----------
26
Fugue
76.93
15%
-26
- C6 -
1OKE
4
POLG_DEN2P
A:
[1-394]
M
-
R
C
I
G
I
S
N
R
D
F
V
E
G
V
S
G
GS
W
V
D
I
V
L
E
HG
S
C
V
T
T
M
A
K
N
K
P
T
L
D
F
E
L
I
---
K
T
E
A
K
Q
P
A
T
L
R
K
Y
C
I
E
A
--
K
L
T
N
T
T
T
E
S
R
C
P
T
Q
G
-
E
P
T
L
N
-----
E
E
Q
DKR
F
V
C
-
K
H
S
----
M
V
D
R
G
W
G
N
G
-----------
C
G
L
F
---------
G
K
G
G
I
V
T
C
A
M
F
T
C
K
K
N
-
M
E
G
K
I
V
Q
P
-------
E
N
L
E
Y
T
V
V
I
T
P
H
S
G
E
E
H
A
-
V
G
-------
N
D
--
T
G
K
H
G
K
E
V
K
I
T
P
Q
S
S
I
T
---------
E
A
E
L
T
G
Y
G
T
V
-
T
M
E
C
S
P
----
R
T
G
L
-
D
F
N
E
M
V
L
L
Q
M
K
D
K
-
A
W
-
L
-
V
H
R
Q
W
F
L
------
D
------
L
-----------
P
L
P
W
-
L
P
G
A
D
T
Q
G
S
N
W
I
Q
K
-
E
T
L
V
T
F
K
N
-
P
H
A
K
K
Q
D
V
V
V
LGS
Q
E
G
A
----
M
------
H
T
--
A
L
T
-
G
-
A
T
E
I
Q
M
S
-----------
S
G
N
L
L
F
T
G
H
L
K
C
R
L
R
M
D
K
-
L
Q
L
K
G
M
------
S
Y
S
--
M
C
T
G
K
F
K
V
V
K
E
I
A
E
T
Q
H
G
-
T
I
V
I
--
R
-----
V
Q
Y
E
----
G
---
D
G
S
P
C
K
I
P
F
E
------
I
-
M
D
L
-----
E
K
R
-
H
V
L
G
R
-----
L
I
T
V
N
P
I
V
T
E
K
D
S
P
-
V
N
I
E
A
E
P
P
----
F
G
-------------
D
S
---
Y
I
I
I
--------------------
G
V
E
-
P
G
Q
L
K
L
N
W
F
K
K
-----------
25
Fugue
67.09
15%
-47
- C8 -
3SHQ
1
?
A:
[4-316]
---
K
E
V
V
V
I
V
K
W
S
G
K
E
Y
P
---
V
D
L
T
D
Q
---------
D
T
V
E
V
L
R
H
E
I
F
---
R
K
T
Q
V
R
-
P
E
R
Q
K
L
L
-------------------------------------------
N
----
L
K
Y
K
G
K
T
A
A
-
D
-
N
V
K
I
-----
S
A
L
E
L
K
F
K
L
M
M
V
G
S
T
E
D
N
I
G
E
V
V
D
D
F
D
D
-
A
D
E
E
S
V
A
H
-------
S
A
V
Y
L
A
K
V
Q
R
R
V
R
D
Y
K
I
K
-
E
L
-------
A
P
--
P
R
E
G
K
K
L
L
V
L
D
I
D
Y
T
L
F
---------
D
H
R
S
P
A
E
T
------------------------------------------------
G
T
E
------
L
-----------
M
R
P
Y
-
L
H
E
F
L
T
S
A
Y
E
D
-------
Y
D
I
V
I
W
S
A
T
S
M
R
W
I
E
E
---
K
M
R
L
----
L
------
G
V
AS
N
D
N
-
Y
-
K
V
M
F
Y
L
D
S
T
A
M
I
S
V
H
V
P
E
R
G
V
V
D
V
K
P
L
G
V
I
W
A
L
Y
K
Q
-
Y
N
S
S
N
---------
T
I
M
F
D
D
I
R
R
N
F
L
--
M
N
P
K
S
G
L
-
K
---------------------------
I
R
P
F
R
Q
------
A
-
H
L
N
-----
R
G
T
-
D
T
E
L
L
-----
K
L
S
--
D
Y
L
R
K
I
A
H
H
-
C
---------------------
P
D
F
N
S
L
N
---
H
R
K
W
--------------------
E
H
Y
-
H
P
--------------------
13
HHSearch
46.93
22%
-27
- C9 -
3ZBJ
-
?
A:
[25-94]
--------------------------------------------------
K
I
D
A
V
A
-
G
V
A
T
H
I
V
V
A
P
DE
T
Y
I
-------
T
H
A
F
G
-
D
S
E
S
R
-----
T
F
A
---
H
-
K
-
M
N
H
----
F
F
V
K
P
K
Q
A
M
S
D
-
T
N
L
V
I
V
T
-
D
K
R
T
-
Y
N
I
V
L
H
F
I
G
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
46.17
31%
-15
- C10 -
3VKG
-
?
A:
[2837-3007]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
N
I
D
PD
K
-----
I
P
W
I
----
A
---
V
R
T
I
L
G
S
T
I
Y
------
G
-
G
R
I
-----
D
N
E
F
D
M
R
L
L
-----
Y
S
F
L
E
Q
L
F
T
P
S
A
F
N
-
P
D
F
P
L
V
P
S
----
I
G
L
-
S
--
V
-
P
E
G
T
T
R
A
H
---
F
M
K
-----------------------------------------------
10
HHSearch
45.45
10%
-34
- C9 -
1F1S
-
HYSA_STRA3
A:
[179-250]
------------------------------------------
T
Q
I
E
K
---
S
V
N
T
A
L
-
N
K
N
Y
V
F
N
K
----
A
D
Y
-------
Q
Y
T
L
T
-
N
P
S
L
G
-----
K
I
V
---
G
---
G
-------
I
L
Y
P
N
A
T
G
-
S
-
T
T
V
K
I
S
D
K
S
G
K
I
I
K
E
V
P
L
S
V
T
A
S
T
E
D
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
44.69
36%
30
- C10 -
4C4O
2
?
A:
[261-322]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
L
G
A
P
N
L
S
-
F
N
L
G
--
D
-----
L
A
-
L
----
R
---
E
I
R
I
L
G
S
F
W
G
------
T
-
T
N
------
D
L
D
-
D
--
V
L
-----
K
L
V
S
E
G
K
V
K
P
V
V
R
S
-
A
K
L
K
E
L
P
---------------------------------------------------------------------------
4
PsiBlast_PDB
44.41
36%
35
- C10 -
3WLF
1
?
A:
[266-322]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
L
G
A
P
N
L
S
-
F
N
L
G
--
D
-----
L
A
-
L
----
R
---
E
I
R
I
L
G
S
F
W
G
------
T
-
T
N
------
D
L
D
-
D
--
V
L
-----
K
L
V
S
E
G
K
V
K
P
V
V
R
S
-
A
K
L
K
E
L
P
---------------------------------------------------------------------------
5
PsiBlast_PDB
43.22
36%
42
- C10 -
3WNQ
1
?
A:
[266-322]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
L
G
A
P
N
L
S
-
F
N
L
G
--
D
-----
L
A
-
L
----
R
---
E
I
R
I
L
G
S
F
W
G
------
T
-
T
N
------
D
L
D
-
D
--
V
L
-----
K
L
V
S
E
G
K
V
K
P
V
V
R
S
-
A
K
L
K
E
L
P
---------------------------------------------------------------------------
3
PsiBlast_PDB
42.23
36%
27
- C10 -
3WLE
1
?
A:
[266-322]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
L
G
A
P
N
L
S
-
F
N
L
G
--
D
-----
L
A
-
L
----
R
---
E
I
R
I
L
G
S
F
W
G
------
T
-
T
N
------
D
L
D
-
D
--
V
L
-----
K
L
V
S
E
G
K
V
K
P
V
V
R
S
-
A
K
L
K
E
L
P
---------------------------------------------------------------------------
2
PsiBlast_PDB
39.81
29%
28
* C9 *
3N6R
-
?
A:
[491-544]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
V
A
E
I
R
R
T
R
V
S
G
R
-
M
D
-------
N
H
--
E
R
R
V
G
T
E
W
V
V
T
L
Q
G
A
D
F
---------
P
V
T
I
A
A
D
H
D
G
-
S
T
V
S
F
D
----
D
G
S
S
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
37.98
33%
69
* C11 *
3J9T
-
VATA_YEAST
A:
[390-440]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
F
--
Y
E
R
A
G
K
A
V
A
L
G
S
P
D
R
T
G
---------
S
V
S
I
V
A
A
V
S
P
-
A
G
G
D
F
S
D
P
V
T
T
A
T
L
-
G
I
T
----
Q
V
F
W
G
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
HHSearch
37.03
19%
61
- C9 -
3NCX
-
?
A:
[800-841]
-------------------------------------------------------------------------------------
N
T
S
I
A
-----
T
V
D
---
A
---
S
G
K
------
V
T
L
N
G
K
G
-
S
-
V
V
I
K
A
T
S
G
D
K
Q
T
-
V
S
Y
T
I
K
A
P
S
Y
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
Fugue
36.94
22%
41
* C10 *
2KI0
-
?
A:
[1-36]
-----------------------------------------------------------------------------------------------------------------------
G
S
-
G
-
Q
V
R
T
I
W
V
G
G
T
P
E
E
L
K
K
L
K
E
E
A
K
K
A
N
I
R
V
T
F
W
G
D
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
36.54
33%
64
- C11 -
3J9V
-
VATA_YEAST
E:
[390-440]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
F
--
Y
E
R
A
G
K
A
V
A
L
G
S
P
D
R
T
G
---------
S
V
S
I
V
A
A
V
S
P
-
A
G
G
D
F
S
DPVT
T
A
T
L
-
G
I
T
----
Q
V
F
W
G
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
36.48
33%
73
- C11 -
3J9U
-
VATA_YEAST
C:
[390-440]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
F
--
Y
E
R
A
G
K
A
V
A
L
G
S
P
D
R
T
G
---------
S
V
S
I
V
A
A
V
S
P
-
A
G
G
D
F
S
DPVT
T
A
T
L
-
G
I
T
----
Q
V
F
W
G
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
HHSearch
32.22
7%
133
- C10 -
1QYS
-
?
A:
[11-52]
----------------------------------------------------------------------------------------------------------------------------------
D
D
N
G
K
N
-
F
D
Y
T
Y
T
V
T
T
--
E
S
E
L
Q
K
V
L
N
E
L
M
D
Y
I
K
K
Q
G
A
K
R
-------
V
R
I
S
I
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------