@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF01327_DEF_EC: (2014-09-22 )
MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA

Atome Classification :

(50 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

2BB_A_5(3K6L)
DEF_ECOLI
[Raw transfer]




2BB_B_7(3K6L)
DEF_ECOLI
[Raw transfer]




BB1_B_8(1G27)
DEF_ECOLI
[Raw transfer]




BB1_A_7(1G27)
DEF_ECOLI
[Raw transfer]




BB2_A_9(1LRU)
DEF_ECOLI
[Raw transfer]




BB1_C_9(1G27)
DEF_ECOLI
[Raw transfer]




BB2_C_11(1LRU)
DEF_ECOLI
[Raw transfer]




BB2_C_9(1G2A)
DEF_ECOLI
[Raw transfer]




BB2_A_7(1G2A)
DEF_ECOLI
[Raw transfer]




BB2_B_8(1G2A)
DEF_ECOLI
[Raw transfer]




BB2_B_10(1LRU)
DEF_ECOLI
[Raw transfer]




MLN_A_4(1BSJ)
DEF_ECOLI
[Raw transfer]




FMT_A_3(1XEO)
DEF_ECOLI
[Raw transfer]




FMT_A_3(1XEN)
DEF_ECOLI
[Raw transfer]




MLN_A_4(1BSK)
DEF_ECOLI
[Raw transfer]




SB7_A_7(2AI8)
DEF_ECOLI
[Raw transfer]




BB2_A_5(3U04)
?
[Raw transfer]




FMT_A_3(2W3U)
DEF_ECOLI
[Raw transfer]




FMT_A_6(1XEN)
DEF_ECOLI
[Raw transfer]




SB7_C_9(2AI8)
DEF_ECOLI
[Raw transfer]




FMT_A_10(1XEM)
DEF_ECOLI
[Raw transfer]




GOL_A_7(1N5N)
DEF_PSEAE
[Raw transfer]




SB7_B_8(2AI8)
DEF_ECOLI
[Raw transfer]




BB2_A_5(3UWB)
?
[Raw transfer]




2PE_A_9(1BSZ)
DEF_ECOLI
[Raw transfer]




GOL_A_5(1N5N)
DEF_PSEAE
[Raw transfer]




FMT_A_13(1Y6H)
DEF_LEPIN
[Raw transfer]




2PE_C_11(1BSZ)
DEF_ECOLI
[Raw transfer]




BB2_A_5(2OKL)
DEF2_BACCR
[Raw transfer]




2PE_C_11(1ICJ)
DEF_ECOLI
[Raw transfer]




2PE_B_10(1ICJ)
DEF_ECOLI
[Raw transfer]




2PE_C_11(1BS4)
DEF_ECOLI
[Raw transfer]




2PE_B_10(1BSZ)
DEF_ECOLI
[Raw transfer]




NVC_A_3(3E3U)
DEF_MYCTU
[Raw transfer]




2PE_A_9(1ICJ)
DEF_ECOLI
[Raw transfer]




2PE_B_10(1BS4)
DEF_ECOLI
[Raw transfer]




BRR_A_5(1RL4)
?
[Raw transfer]




2PE_A_9(1BS4)
DEF_ECOLI
[Raw transfer]




FMT_A_7(4DR8)
?
[Raw transfer]




QAP_A_3(4E9A)
?
[Raw transfer]




BME_A_4(4AL3)
DEF_ECOLI
[Raw transfer]




EOH_A_4(2W3T)
DEF_ECOLI
[Raw transfer]




EOH_A_4(2W3T)
DEF_ECOLI
[Raw transfer]




CHAIN_D_4(1BS8)
DEF_ECOLI
[Raw transfer]

-

CHAIN_E_5(1BS8)
DEF_ECOLI
[Raw transfer]

-

H2S_A_5(4AL2)
DEF_ECOLI
[Raw transfer]




H2S_B_7(4AL2)
DEF_ECOLI
[Raw transfer]




CHAIN_E_5(1BS6)
DEF_ECOLI
[Raw transfer]

-

H2S_A_3(4AZ4)
?
[Raw transfer]




CHAIN_F_6(1BS6)
DEF_ECOLI
[Raw transfer]

-

H2S_C_9(4AL2)
DEF_ECOLI
[Raw transfer]




CHAIN_D_4(1BS6)
DEF_ECOLI
[Raw transfer]

-

CHAIN_F_6(1BS8)
DEF_ECOLI
[Raw transfer]

-

EDO_B_10(4DR8)
?
[Raw transfer]




30 PsiBlast_CBE 98.65100%-107 - C5 -1ICJ 4.9 DEF_ECOLI
46 PsiBlast_CBE 98.63100%-107 - C5 -1BS4 5.3 DEF_ECOLI
29 PsiBlast_CBE 98.48100%-104 - C5 -1ICJ 4.5 DEF_ECOLI
36 PsiBlast_CBE 98.47100%-106 - C5 -1BSZ 5.9 DEF_ECOLI
35 PsiBlast_CBE 98.37100%-106 - C5 -1BSZ 4.1 DEF_ECOLI
42 PsiBlast_CBE 98.26100%-105 - C5 -1BS6 4.8 DEF_ECOLI
37 PsiBlast_CBE 98.26100%-107 - C5 -1BS8 4.3 DEF_ECOLI
5 PsiBlast_PDB 98.26100%-106 - C5 -1ICJ 5.5 DEF_ECOLI
38 PsiBlast_CBE 98.19100%-103 - C5 -1BS8 4.6 DEF_ECOLI
11 PsiBlast_PDB 98.16100%-104 - C5 -1BSZ 5.5 DEF_ECOLI
45 PsiBlast_CBE 98.03100%-108 - C5 -1BS4 5.2 DEF_ECOLI
41 PsiBlast_CBE 97.95100%-107 - C5 -1BS6 4.9 DEF_ECOLI
8 PsiBlast_PDB 97.68100%-112 - C5 -1BS6 4.7 DEF_ECOLI
10 PsiBlast_PDB 97.59100%-107 - C5 -1BS8 4.7 DEF_ECOLI
49 Fugue 97.56100%-106 - C5 -1BS4 6.2 DEF_ECOLI
20 PsiBlast_PDB 97.06100%-104 - C5 -2AI8 4.3 DEF_ECOLI
24 PsiBlast_CBE 97.00100%-110 - C5 -4AL2 2.8 DEF_ECOLI
25 PsiBlast_CBE 96.96100%-107 - C5 -2AI8 4.3 DEF_ECOLI
18 PsiBlast_PDB 96.57100%-107 - C5 -1XEN 3.5 DEF_ECOLI
26 PsiBlast_CBE 96.56100%-106 - C5 -2AI8 4.1 DEF_ECOLI
31 PsiBlast_CBE 96.53100%-107 - C5 -1G2A 7.1 DEF_ECOLI
4 PsiBlast_PDB 96.49100%-107 - C5 -2W3U 3.4 DEF_ECOLI
34 PsiBlast_CBE 96.42100%-111 - C5 -1G27 5.2 DEF_ECOLI
15 PsiBlast_PDB 96.38100%-109 - C5 -1G2A 6.6 DEF_ECOLI
59 HHSearch 96.22100%-106 - C5 -1XEO 3.5 DEF_ECOLI
32 PsiBlast_CBE 96.19100%-107 - C5 -1G2A 6.6 DEF_ECOLI
14 PsiBlast_PDB 96.19100%-107 - C5 -1G27 6.2 DEF_ECOLI
16 PsiBlast_PDB 96.15100%-106 - C5 -1LRU 6.2 DEF_ECOLI
13 PsiBlast_PDB 96.13100%-106 - C5 -1BSK 7.2 DEF_ECOLI
28 PsiBlast_CBE 95.99100%-107 - C5 -1LRU 7.2 DEF_ECOLI
33 PsiBlast_CBE 95.86100%-108 - C5 -1G27 5.2 DEF_ECOLI
17 PsiBlast_PDB 95.66100%-104 - C5 -1XEM 3.1 DEF_ECOLI
12 PsiBlast_PDB 95.60100%-104 - C5 -1BSJ 6.9 DEF_ECOLI
1 PsiBlast_PDB 95.52100%-112 - C5 -3K6L 6.0 DEF_ECOLI
22 PsiBlast_CBE 95.43100%-110 - C5 -3K6L 5.7 DEF_ECOLI
62 HHSearch 95.41100%-107 - C5 -2W3T 2.4 DEF_ECOLI
2 PsiBlast_PDB 95.37100%-114 - C5 -4AL2 2.8 DEF_ECOLI
23 PsiBlast_CBE 95.08100%-119 - C5 -4AL2 2.8 DEF_ECOLI
27 PsiBlast_CBE 93.40100%-113 - C5 -1LRU 6.5 DEF_ECOLI
47 PsiBlast_CBE 89.3399% -79 - C5 -4AZ4 2.8 ?
61 HHSearch 82.4657% -98 - C5 -1N5N 2.6 DEF_PSEAE
48 PsiBlast_CBE 78.8399% -58 - C5 -4AL3 2.3 DEF_ECOLI
63 HHSearch 77.5543%-104 - C5 -3U04 6.5 ?
71 HHSearch 73.0042%-103 - C5 -4DR8 3.3 ?
64 HHSearch 72.9741% -95 - C5 -4E9A 6.4 ?
69 HHSearch 70.4533% -91 - C5 -3E3U 6.1 DEF_MYCTU
65 HHSearch 70.0833% -97 - C5 -1RL4 4.2 ?
67 HHSearch 67.4036% -89 - C5 -1Y6H 3.4 DEF_LEPIN
74 HHSearch 67.0939% -96 - C5 -3UWB 6.3 ?
77 HHSearch 66.8531% -91 - C5 -2OKL 5.6 DEF2_BACCR