@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : AMHR2_HUMAN: (2015-10-03 )
MLGSLGLWALLPTAVEAPPNRRTCVFFEAPGVRGSTKTLGELLDTGTELPRAIRCLYSRCCFGIWNLTQDRAQVEMQGCRDSDEPGCESLHCDPSPRAHPSPGSTLFTCSCGTDFCNANYSHLPPPGSPGTPGSQGPQAAPGESIWMALVLLGLFLLLLLLLGSIILALLQRKNYRVRGEPVPEPRPDSGRDWSVELQELPELCFSQVIREGGHAVVWAGQLQGKLVAIKAFPPRSVAQFQAERALYELPGLQHDHIVRFITASRGGPGRLLSGPLLVLELHPKGSLCHYLTQYTSDWGSSLRMALSLAQGLAFLHEERWQNGQYKPGIAHRDLSSQNVLIREDGSCAIGDLGLALVLPGLTQPPAWTPTQPQGPAAIMEAGTQRYMAPELLDKTLDLQDWGMALRRADIYSLALLLWEILSRCPDLRPDSSPPPFQLAYEAELGNTPTSDELWALAVQERRRPYIPSTWRCFATDPDGLRELLEDCWDADPEARLTAECVQQRLAALAHPQESHPFPESCPRGCPPLCPEDCTSIPAPTILPCRPQRSACHFSVQQGPCSRNPQPACTLSPV

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ZZG_A_2(2WOT)
TGFR1_HUMAN
[Raw transfer]




QIG_A_2(3GXL)
TGFR1_HUMAN
[Raw transfer]




855_A_2(3HMM)
TGFR1_HUMAN
[Raw transfer]




IYZ_A_4(4DYM)
ACVR1_HUMAN
[Raw transfer]




GOL_A_6(4DYM)
ACVR1_HUMAN
[Raw transfer]




844_B_10(4BGG)
ACVR1_HUMAN
[Raw transfer]




3WN_A_2(4X2J)
TGFR1_HUMAN
[Raw transfer]




LDN_B_13(3Q4U)
ACVR1_HUMAN
[Raw transfer]




LDN_C_6(3MDY)
BMR1B_HUMAN
[Raw transfer]




PY1_C_3(1PY5)
TGFR1_HUMAN
[Raw transfer]




844_A_5(4BGG)
ACVR1_HUMAN
[Raw transfer]




3WO_A_2(4X2K)
TGFR1_HUMAN
[Raw transfer]




LDN_C_20(3Q4U)
ACVR1_HUMAN
[Raw transfer]




844_D_16(4BGG)
ACVR1_HUMAN
[Raw transfer]




507_A_4(3OOM)
ACVR1_HUMAN
[Raw transfer]




GVD_B_10(3SOC)
AVR2A_HUMAN
[Raw transfer]




GVD_A_3(3SOC)
AVR2A_HUMAN
[Raw transfer]




LDN_A_5(3Q4U)
ACVR1_HUMAN
[Raw transfer]




844_C_14(4BGG)
ACVR1_HUMAN
[Raw transfer]




ZZF_A_3(2WOU)
TGFR1_HUMAN
[Raw transfer]




580_B_2(1RW8)
TGFR1_HUMAN
[Raw transfer]




TAK_B_17(3Q4T)
AVR2A_HUMAN
[Raw transfer]




LDN_A_5(3MDY)
BMR1B_HUMAN
[Raw transfer]




085_A_2(3TZM)
TGFR1_HUMAN
[Raw transfer]




TAK_A_3(3Q4T)
AVR2A_HUMAN
[Raw transfer]




TAK_A_10(4C02)
ACVR1_HUMAN
[Raw transfer]




6OJ_B_8(4ASX)
AVR2A_HUMAN
[Raw transfer]




6OJ_A_3(4ASX)
AVR2A_HUMAN
[Raw transfer]




A3F_A_17(3MTF)
ACVR1_HUMAN
[Raw transfer]




TAK_A_3(3H9R)
ACVR1_HUMAN
[Raw transfer]




3WA_A_2(4X0M)
TGFR1_HUMAN
[Raw transfer]




3WK_A_2(4X2G)
?
[Raw transfer]




ADE_A_4(2QLU)
AVR2B_HUMAN
[Raw transfer]




TRS_A_4(4X2G)
?
[Raw transfer]




EDO_A_10(3Q4U)
ACVR1_HUMAN
[Raw transfer]




42 PsiBlast_CBE 94.3933%-102 - C2 -4X2J 4.8 TGFR1_HUMAN
41 PsiBlast_CBE 94.3933%-102 - C2 -4X2K 4.8 TGFR1_HUMAN
11 PsiBlast_PDB 94.3733%-104 - C2 -4X2G 4.0 ?
43 PsiBlast_CBE 93.0333%-103 - C2 -4X0M 3.6 TGFR1_HUMAN
15 PsiBlast_PDB 92.5133%-108 - C2 -3HMM 6.5 TGFR1_HUMAN
12 PsiBlast_PDB 92.0133%-100 - C2 -2WOT 7.8 TGFR1_HUMAN
9 PsiBlast_PDB 91.6233%-105 - C2 -3TZM 6.4 TGFR1_HUMAN
13 PsiBlast_PDB 90.8733%-105 - C2 -2WOU 4.6 TGFR1_HUMAN
16 PsiBlast_PDB 90.2534%-107 - C2 -3H9R 6.3 ACVR1_HUMAN
44 PsiBlast_CBE 89.6434%-101 - C2 -4BGG 6.7 ACVR1_HUMAN
10 PsiBlast_PDB 89.1633% -97 - C2 -1PY5 5.0 TGFR1_HUMAN
45 PsiBlast_CBE 88.5534%-102 - C2 -4BGG 6.9 ACVR1_HUMAN
8 PsiBlast_PDB 88.3433% -97 - C2 -1RW8 5.0 TGFR1_HUMAN
14 PsiBlast_PDB 88.1733%-103 - C2 -3GXL 7.0 TGFR1_HUMAN
2 PsiBlast_PDB 88.1134% -96 - C2 -3Q4T 7.3 AVR2A_HUMAN
23 PsiBlast_CBE 87.7134% -98 - C2 -3Q4T 6.5 AVR2A_HUMAN
47 PsiBlast_CBE 87.6334%-101 - C2 -4BGG 7.3 ACVR1_HUMAN
46 PsiBlast_CBE 87.6334%-101 - C2 -4BGG 7.1 ACVR1_HUMAN
21 PsiBlast_CBE 87.3334% -97 - C2 -4ASX 4.6 AVR2A_HUMAN
90 HHSearch 86.9234% -96 - C2 -3MDY 6.0 BMR1B_HUMAN
22 PsiBlast_CBE 86.8834% -98 - C2 -3SOC 5.0 AVR2A_HUMAN
1 PsiBlast_PDB 86.8835% -94 - C2 -2QLU 3.9 AVR2B_HUMAN
17 PsiBlast_PDB 86.8034%-104 - C2 -4C02 5.1 ACVR1_HUMAN
52 PsiBlast_CBE 86.6134%-100 - C2 -4DYM 6.0 ACVR1_HUMAN
20 PsiBlast_PDB 86.5034% -99 - C2 -3Q4U 7.2 ACVR1_HUMAN
50 PsiBlast_CBE 86.4234%-102 - C2 -3Q4U 7.4 ACVR1_HUMAN
4 PsiBlast_PDB 86.4134% -98 - C2 -4ASX 3.3 AVR2A_HUMAN
49 PsiBlast_CBE 86.3834% -98 - C2 -3Q4U 7.8 ACVR1_HUMAN
3 PsiBlast_PDB 86.2434% -97 - C2 -3SOC 5.8 AVR2A_HUMAN
18 PsiBlast_PDB 85.5534%-100 - C2 -3MTF 6.5 ACVR1_HUMAN
19 PsiBlast_PDB 84.8434% -99 - C2 -3OOM 4.8 ACVR1_HUMAN
53 PsiBlast_CBE 83.7533% -90 - C2 -3MDY 7.4 BMR1B_HUMAN