@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-04 )
APGCDTVDTDLAPCISYLQTGTGNPTVQCCSGVKTLAGTAQTTEDRKAICECIKTAAIRVKPVANAVKSLPGLCSVTLPFPISIATDCNKIV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



FMT_A_5(1FK5)
NLTP_MAIZE
[Raw transfer]
19 HHSearch 94.7543%-143 - C1 -1T12 - NLTP1_TOBAC -
18 HHSearch 91.1943%-120 - C1 -1AFH - NLTP_MAIZE -
23 HHSearch 91.1744%-133 - C1 -1SIY - NLTP1_VIGRR -
11 SP3 89.9242%-124 - C1 -1FK5 5.4 NLTP_MAIZE
20 HHSearch 85.7738%-124 - C1 -2ALG - NLTP1_PRUPE -
22 HHSearch 84.2838%-114 - C1 -1BWO - NLTP1_WHEAT -
36 HHSearch 70.6025%-153 - C1 -1SM7 - ? -
37 HHSearch 67.6418%-130 - C1 -1W2Q - CONG_ARAHY -
6 Fugue 61.6428% -96 - C1 -1PSY - 2SS_RICCO -
31 HHSearch 59.5129%-122 - C1 -1PSY - 2SS_RICCO -
29 HHSearch 56.0625%-128 - C1 -1S6D - 2SS8_HELAN -
33 HHSearch 55.4614%-152 - C1 -1BEA - ITRF_MAIZE -
4 Fugue 50.6614% -84 - C1 -1W2Q - CONG_ARAHY -
34 HHSearch 49.2316%-107 - C1 -1B1U - IAAT_ELECO -
27 HHSearch 48.8416%-118 - C1 -2LVF - ? -
2 Fugue 47.4217% -94 - C1 -2RKN - DIRL1_ARATH -
5 Fugue 45.5912% -66 - C1 -3UUN - DMD_HUMAN -
7 Fugue 45.4814% -74 - C1 -3T6G - BCAR1_HUMAN -
24 HHSearch 44.2915% -92 - C1 -2RKN - DIRL1_ARATH -
32 HHSearch 44.2216%-124 - C1 -3OB4 - ? -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OLA_A_2(1FK5)
NLTP_MAIZE
[Raw transfer]



FMT_A_5(1FK5)
NLTP_MAIZE
[Raw transfer]
39 95.94100%-132 - C- -M039 - -
38 95.47100%-133 - C- -M038 - -
45 91.59100%-139 - C- -M045 - -
44 91.05100%-131 - C- -M044 - -