@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-15 )
APSCPAVAQTLTPCLPHVSNPGPSPPQPCCNRVKTLNSQAKTTQDRHHVCGCLKSLMAGIPGLNLPAFASVAKDCGVDIGYIISPNTDCSK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
21 HHSearch 94.7948%-143 - C2 -1T12 - NLTP1_TOBAC -
20 HHSearch 94.6145%-149 - C2 -1AFH - NLTP_MAIZE -
11 SP3 92.1345%-141 - C2 -1FK5 - NLTP_MAIZE -
23 HHSearch 86.0241%-138 - C2 -2ALG 4.7 NLTP1_PRUPE
24 HHSearch 83.3640%-133 - C2 -1BWO - NLTP1_WHEAT -
25 HHSearch 79.4034%-130 - C2 -1SIY - NLTP1_VIGRR -
29 HHSearch 63.8923%-160 - C2 -1BEA - ITRF_MAIZE -
39 HHSearch 61.9222%-144 * C2 *1HSS - IAA1_WHEAT -
16 SP3 60.9418%-155 - C2 -1HSS - IAA1_WHEAT -
38 HHSearch 53.4717%-130 - C2 -1W2Q - CONG_ARAHY -
34 HHSearch 53.4323%-121 - C2 -1B1U - IAAT_ELECO -
2 Fugue 53.1629%-113 - C2 -2RKN - DIRL1_ARATH -
26 HHSearch 52.8430%-117 - C2 -2RKN - DIRL1_ARATH -
37 HHSearch 52.3722%-133 - C2 -1PSY - 2SS_RICCO -
5 Fugue 49.6414% -96 - C2 -1S6D - 2SS8_HELAN -
35 HHSearch 49.5724%-132 - C2 -1SM7 - ? -
32 HHSearch 49.0118%-119 - C2 -2LVF - ? -
30 HHSearch 47.0315%-142 - C2 -1S6D - 2SS8_HELAN -
36 HHSearch 46.8618%-125 - C2 -3OB4 - ? -
14 SP3 42.6318% -97 - C2 -1QPO - NADC_MYCTU -


User Run . : Multi Template Modeling Result:

(5 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DAO_E_5(2ALG)
NLTP1_PRUPE
[Raw transfer]
43 96.01100%-161 - C- -M043 - -
42 94.21100%-151 - C- -M042 - -
41 93.96100%-158 - C- -M041 - -
47 91.88100%-147 - C- -M047 - -
48 91.53100%-158 - C- -M048 - -