@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : new_query: (2014-05-15 )
GPYCRDVVETILPCIEYITTPGASTLPAPCCNGMKSLNGEPQYVCRCLKETFFVLPGLNLAALAALPKNCGVNLPYQITPDMNCDKVN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]
21 HHSearch 93.8240%-163 - C1 -2ALG 3.0 NLTP1_PRUPE
22 HHSearch 93.5239%-167 - C1 -1T12 - NLTP1_TOBAC -
20 HHSearch 92.2938%-163 - C1 -1AFH - NLTP_MAIZE -
25 HHSearch 86.4233%-161 - C1 -1BWO - NLTP1_WHEAT -
24 HHSearch 86.1535%-169 - C1 -1SIY - NLTP1_VIGRR -
11 SP3 81.7229%-133 - C1 -1FK5 - NLTP_MAIZE -
2 Fugue 59.3718%-141 - C1 -2RKN - DIRL1_ARATH -
31 HHSearch 57.7720%-182 - C1 -1BEA - ITRF_MAIZE -
36 HHSearch 56.9023%-159 - C1 -1SM7 - ? -
5 Fugue 56.7720%-117 - C1 -1PSY - 2SS_RICCO -
18 SP3 56.2818%-124 - C1 -1PSY - 2SS_RICCO -
4 Fugue 55.2216%-126 - C1 -1S6D - 2SS8_HELAN -
26 HHSearch 55.1018%-143 - C1 -2RKN - DIRL1_ARATH -
30 HHSearch 51.4524%-105 - C1 -3OB4 - ? -
38 HHSearch 50.2716%-135 - C1 -1W2Q - CONG_ARAHY -
3 Fugue 50.1820%-114 - C1 -1W2Q - CONG_ARAHY -
39 HHSearch 49.9414%-172 * C1 *1HSS - IAA1_WHEAT -
37 HHSearch 49.6718%-153 - C1 -1B1U - IAAT_ELECO -
16 SP3 49.1114%-133 - C1 -1S6D - 2SS8_HELAN -
33 HHSearch 47.2217%-145 - C1 -1S6D - 2SS8_HELAN -


User Run . : Multi Template Modeling Result:

(4 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HP6_G_7(2ALG)
NLTP1_PRUPE
[Raw transfer]
43 99.39100%-188 - C- -M043 - -
45 98.57100%-183 - C- -M045 - -
47 98.55100%-186 - C- -M047 - -
41 97.67100%-181 - C- -M041 - -