@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0346: (2015-11-30 )
MPTINQLVRKGRLKLSCKKKVPALGKSNPQRRGVCTKVYTTTPRKPNSALRKVARVRISGYGEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIIRGALDLRGVQNRKKARSKYGVKKSS

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_X_2(2UUC)
RS12_THET8
[Raw transfer]
-
NACID_W_22(4B3R)
RS12_THET8
[Raw transfer]
-
NACID_W_22(4AQY)
RS12_THET8
[Raw transfer]
-
NACID_X_2(2VQE)
RS12_THET8
[Raw transfer]
-
NACID_W_22(4B3M)
RS12_THET8
[Raw transfer]
-
CHAIN_Z_2(1N34)
RS12_THET8
[Raw transfer]
-
CHAIN_X_2(2UU9)
RS12_THET8
[Raw transfer]
-
NACID_X_2(2UUA)
RS12_THET8
[Raw transfer]
-
NACID_X_2(2UUB)
RS12_THET8
[Raw transfer]
-
CHAIN_W_22(3T1Y)
RS12_THET8
[Raw transfer]
-
NACID_W_22(4B3T)
RS12_THET8
[Raw transfer]
-
NACID_X_2(2VQE)
RS12_THET8
[Raw transfer]
-
CHAIN_X_22(4JV5)
RS12_THET8
[Raw transfer]
-
CHAIN_X_22(4K0K)
RS12_THET8
[Raw transfer]
-
50 PsiBlast_CBE 90.8575% -81 - C1 -4JI8 - RS12_THET8 -
19 PsiBlast_PDB 90.6277% -73 - C1 -4B3S - RS12_THET8 -
3 PsiBlast_PDB 90.0576% -73 - C1 -4KHP - RS12_THET8 -
12 PsiBlast_PDB 90.0476% -76 - C1 -4WT8 - RS12_THET8 -
15 PsiBlast_PDB 89.8277% -79 - C1 -3T1H - RS12_THET8 -
10 PsiBlast_PDB 89.2776% -67 - C1 -4GKJ - RS12_THET8 -
16 PsiBlast_PDB 89.2377% -72 - C1 -3T1Y Error RS12_THET8
20 PsiBlast_PDB 89.1477% -73 - C1 -4B3T Error RS12_THET8
18 PsiBlast_PDB 88.9977% -76 - C1 -4B3R Error RS12_THET8
17 PsiBlast_PDB 88.9877% -77 - C1 -4B3M Error RS12_THET8
79 Fugue 88.8776% -66 * C1 *1FJG - RS12_THET8 -
2 PsiBlast_PDB 88.8576% -77 - C1 -4K0K 3.6 RS12_THET8
13 PsiBlast_PDB 88.7876% -78 - C1 -4YHH - RS12_THET8 -
1 PsiBlast_PDB 88.6077% -74 - C1 -4OX9 - RS12_THET8 -
21 PsiBlast_CBE 88.5676% -77 - C1 -4AQY Error RS12_THET8
52 PsiBlast_CBE 88.0475% -78 - C1 -4JI3 - RS12_THET8 -
4 PsiBlast_PDB 87.9176% -77 - C1 -4JV5 3.7 RS12_THET8
69 HHSearch 87.5576% -68 - C1 -2VQE Error RS12_THET8
11 PsiBlast_PDB 87.2076% -66 - C1 -4GKK - RS12_THET8 -
34 PsiBlast_CBE 86.9876% -79 - C1 -1N34 Error RS12_THET8
27 PsiBlast_CBE 86.8976% -76 - C1 -2UUB Error RS12_THET8
23 PsiBlast_CBE 86.4076% -70 - C1 -2VQE Error RS12_THET8
26 PsiBlast_CBE 85.9676% -67 - C1 -2UUC Error RS12_THET8
29 PsiBlast_CBE 85.9076% -68 - C1 -2UU9 Error RS12_THET8
28 PsiBlast_CBE 85.7176% -73 - C1 -2UUA Error RS12_THET8