@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0363: (2015-11-30 )
MKPKHYPDTISSPDFSSLEKEIIKFWQENKIFEQSVEKRSKDNCFVFYDGPPFANGLPHYGHLLTGFIKDAFARYQTMLQKKVERRFGWDCHGLPAEMGAEKELGISGRTEIEKFGIEKFNNYCRTSVMKFSSEWEKYVNRQARWVDFHNDYKTMDRSFMESVIWAFKQLYDKGLVYESVRVVPYSWACETPLSNFETRLDTAYRKKTSKAVTVAFELLENPQQFKQKCKLLAWTTTPWTLPSNLALAIGKDIEYCAVSVHSSVSFQHVTLESREKETWIPLSRTGMTEEGTETVTEDNEVSLVNNEIYIFAEDYLEKFIGHCEQNNIPYENCNTKLKADDLAGLSYKPLFNYFKGTKNAFRVFIADYVTGEDGTGVVHTAPGFGEEDFYLCQSHDIPAICPIDNSGRFTAEVSDLTGIHVFDTNDAIIKKLKEQGNWFKTEQYIHNYPHCWRTDTPLIYRAMPSWYVAVTKFKERMIELNKRVNWIPTHIRDGQFGKWLERAHDWSISRNRFWGTPIPIWKSDNARYPRVDVYGSIAELERDFNVKVNDLHRPFIDSLTRPNPDDPTGKSIMRRVPDVFDCWFESGSVPFAQVHYPFENKEWFESNFPADFITEYIAQTRGWFYTLFVLSTALFDSEPFKNCICHGVVLDVKGQKLSKRLNNYADPMEVFDKYGSDALRFLMLSGSIVCGGNLFLNKEGSSIRDVLKNVMKPIWNSYHFFTMYANADGIKAEVCKDYKSTIDSYMIFKCFEAVESIQASMSNYNSQEACKILIDFFEVLNNWYIRRSRERFWKSNLDQDKTDAYNVLYTVFYYILRAAVPLLPLITETIWQGLKYKEISVHLADFPQLERYDSELIAKMDLVREICNSALSIRNTFNIRVRQPLGSMTVYHQSSCSFLESKPLSVVIPKFSPVIPMRDTGTQKEKKWSNAEMKTSMNEYQEMIKDEVNVKELKLVNSLEGIASLELKLNFPMLGKRIPDKVKKLVQYVKEGKWKQVDNEQVFLGNESESYIIEKDEYELLLKTNSEYSSVFGDNKGIVILNTALDDALVLEGLARDVVRLIQEARKQADFHISDRIRVIIKTEDEKIKRAINTWGEYIREQTLSLSLEINIEIGDNFYSKEYQDLIVGIELNC

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ILA_A_4(1JZQ)
SYI_THET8
[Raw transfer]



MRC_A_4(1JZS)
SYI_THET8
[Raw transfer]
43 HHSearch 98.9639% -93 - C1 -1ILE - SYI_THET8 -
3 PsiBlast_PDB 97.6537% -89 - C1 -1ILE - SYI_THET8 -
1 PsiBlast_PDB 97.4437% -89 - C1 -1JZQ 5.4 SYI_THET8
2 PsiBlast_PDB 96.9537% -89 - C1 -1JZS 5.2 SYI_THET8
41 HHSearch 84.4827% -76 * C1 *1FFY - SYI1_STAAU -
64 Fugue 83.1025% -67 - C1 -1QU2 - SYI1_STAAU -
5 PsiBlast_PDB 82.4326% -73 - C1 -1QU3 - SYI1_STAAU -
6 PsiBlast_PDB 81.2726% -73 - C1 -1FFY - SYI1_STAAU -
4 PsiBlast_PDB 81.2726% -73 - C1 -1QU2 - SYI1_STAAU -
65 Fugue 80.2722% -63 - C1 -1GAX - SYV_THETH -
42 HHSearch 79.6924% -83 - C1 -1GAX - SYV_THETH -
44 HHSearch 76.0421% -78 - C1 -1WZ2 - SYL_PYRHO -
45 HHSearch 74.9621% -74 - C1 -1WKB - SYL_PYRHO -
11 PsiBlast_PDB 72.9821% -58 - C1 -4AQ7 - SYL_ECOLI -
15 PsiBlast_PDB 72.6821% -56 - C1 -3ZGZ - SYL_ECOLI -
19 PsiBlast_PDB 72.4721% -58 - C1 -4CQN - SYL_ECOLI -
17 PsiBlast_PDB 72.1521% -63 - C1 -3ZJU - SYL_ECOLI -
13 PsiBlast_PDB 71.7621% -64 - C1 -4ARI - SYL_ECOLI -
18 PsiBlast_PDB 71.3721% -62 - C1 -3ZJV - SYL_ECOLI -
16 PsiBlast_PDB 71.2721% -62 - C1 -3ZJT - SYL_ECOLI -