@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0460: (2016-03-15 )
MKCIVGLGNIGKRFELTRHNIGFEVVDYILEKNNFSLDKQKFKGAYTIERMNGDKVLFIEPMTMMNLSGEAVAPIMDYYNVNPEDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIKMLGTDQFKRIRIGVGRPTNGMTVPDYVLQRFSNDEMVTMEKVIEHAARAIEKFVETSRFDHVMNEFNGEVK

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_9(4JY7)
?
[Raw transfer]




GOL_A_9(4IKO)
?
[Raw transfer]




GOL_A_9(4HOY)
?
[Raw transfer]




0L1_A_3(4DHW)
PTH_PSEAE
[Raw transfer]




5AE_A_2(4QD3)
PTH_PSEAE
[Raw transfer]




3NZ_A_3(4QBK)
PTH_PSEAE
[Raw transfer]




PML_B_4(4DJJ)
PTH_PSEAE
[Raw transfer]




PEG_B_4(4ERX)
PTH_PSEAE
[Raw transfer]




0L1_B_4(4DHW)
PTH_PSEAE
[Raw transfer]




PEG_A_3(4ERX)
PTH_PSEAE
[Raw transfer]




PML_A_3(4DJJ)
PTH_PSEAE
[Raw transfer]




GOL_B_8(4FNO)
PTH_PSEAE
[Raw transfer]




URI_A_2(4JX9)
?
[Raw transfer]




EDO_A_4(3NEA)
PTH_FRATT
[Raw transfer]




EDO_A_4(3NEA)
PTH_FRATT
[Raw transfer]




CTN_A_2(4JWK)
?
[Raw transfer]




TLA_A_3(4OLJ)
?
[Raw transfer]




42 Fugue 94.6743%-109 - C3 -4QT4 - PTH_STRPZ -
1 PsiBlast_PDB 94.4743%-109 - C3 -4QT4 - PTH_STRPZ -
21 PsiBlast_CBE 92.9935%-108 - C3 -4JY7 Error ?
27 PsiBlast_CBE 92.6735%-104 - C3 -4OLJ 2.7 ?
17 PsiBlast_PDB 92.2035%-108 - C3 -4FOP - ? -
24 PsiBlast_CBE 91.5535%-103 - C3 -4LWR - ? -
20 PsiBlast_PDB 91.5535%-107 - C3 -4IKO Error ?
18 PsiBlast_PDB 91.4635%-107 - C3 -4FOT - ? -
23 PsiBlast_CBE 91.4435%-104 - C3 -4JWK 3.3 ?
57 HHSearch 91.4035%-111 - C3 -3V2I - PTH_BURTA -
26 PsiBlast_CBE 91.0235%-102 - C3 -3WH4 - ? -
19 PsiBlast_PDB 91.0135%-106 - C3 -4HOY Error ?
56 HHSearch 90.9934%-109 - C3 -3NEA 3.0 PTH_FRATT
28 PsiBlast_CBE 90.9335%-106 - C3 -3V2I - PTH_BURTA -
25 PsiBlast_CBE 90.7735%-104 - C3 -4LWQ - ? -
54 HHSearch 90.5636% -99 - C3 -2PTH - PTH_ECOLI -
2 PsiBlast_PDB 89.5536%-122 - C3 -1RYN - CRS2_MAIZE -
22 PsiBlast_CBE 89.5235%-102 - C3 -4JX9 3.8 ?
55 HHSearch 88.6135%-108 - C3 -1RYB - CRS2_MAIZE -
4 PsiBlast_PDB 88.5436%-116 - C3 -1RYB - CRS2_MAIZE -
38 PsiBlast_CBE 84.5434%-100 - C3 -4DJJ 3.5 PTH_PSEAE
34 PsiBlast_CBE 84.5234% -98 - C3 -4FNO 2.9 PTH_PSEAE
37 PsiBlast_CBE 84.2234%-103 - C3 -4ERX 3.0 PTH_PSEAE
41 PsiBlast_CBE 84.0534% -97 - C3 -4DHW 2.7 PTH_PSEAE
40 PsiBlast_CBE 83.9134% -98 - C3 -4DHW 3.1 PTH_PSEAE
36 PsiBlast_CBE 83.3234% -98 - C3 -4ERX 2.9 PTH_PSEAE
31 PsiBlast_CBE 82.9534% -97 - C3 -4QD3 4.0 PTH_PSEAE
39 PsiBlast_CBE 82.6634%-101 - C3 -4DJJ 2.9 PTH_PSEAE
32 PsiBlast_CBE 82.4534% -95 - C3 -4QBK 7.0 PTH_PSEAE
29 PsiBlast_CBE 81.3438% -99 - C3 -3NEA 3.0 PTH_FRATT