@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0693: (2016-03-18 )
MINKDIYQALQQLIPNEKIKVDEPLKRYTYTKTGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIRGIVISLLSLDHIDVSDDAIIAGSGAAIIDVSRVARDYALTGLEFACGIPGSIGGAVYMNAGAYGGEVKDCIDYALCVNEQGSLIKLTTKELELDYRNSIIQKEHLVVLEAAFTLAPGKMTEIQAKMDDLTERRESKQPLEYPSCGSVFQRPPGHFAGKLIQDSNLQGHRIGGVEVSTKHAGFMVNVDNGTATDYENLIHYVQKTVKEKFGIELNREVRIIGEHPKES

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_2(3TX1)
MURB_LISMO
[Raw transfer]



FAD_B_2(1HSK)
MURB_STAAU
[Raw transfer]



FAD_B_2(1HSK)
MURB_STAAU
[Raw transfer]



FAD_A_2(3TX1)
MURB_LISMO
[Raw transfer]



FAD_B_2(1HSK)
MURB_STAAU
[Raw transfer]



FAD_A_2(4PYT)
MURB_BACLD
[Raw transfer]



FAD_A_3(2GQT)
MURB_THET8
[Raw transfer]



EPU_C_3(1UXY)
?
[Raw transfer]



FAD_B_2(1HSK)
MURB_STAAU
[Raw transfer]
29 HHSearch 98.94100%-125 - C1 -1HSK 14.8 MURB_STAAU
48 Fugue 98.7399%-125 - C1 -1HSK 14.8 MURB_STAAU
1 PsiBlast_PDB 98.7399%-125 - C1 -1HSK 14.8 MURB_STAAU
31 HHSearch 82.9458%-104 - C1 -3TX1 13.6 MURB_LISMO
2 PsiBlast_PDB 82.0859%-105 - C1 -3TX1 13.6 MURB_LISMO
3 PsiBlast_PDB 76.1139%-102 - C1 -4PYT 14.5 MURB_BACLD
30 HHSearch 72.1429% -92 - C1 -1UXY - MURB_ECOLI -
28 HHSearch 71.0529% -85 - C1 -3I99 - MURB_VIBCH -
6 PsiBlast_PDB 70.6826%-101 - C1 -2Q85 - MURB_ECOLI -
9 PsiBlast_PDB 70.1627%-101 - C1 -2MBR - MURB_ECOLI -
10 PsiBlast_PDB 69.8326%-103 - C1 -1UXY - MURB_ECOLI -
7 PsiBlast_PDB 69.6326%-100 - C1 -1MBB - MURB_ECOLI -
11 PsiBlast_PDB 68.4827% -94 - C1 -3I99 - MURB_VIBCH -
8 PsiBlast_PDB 68.3226%-100 - C1 -1MBT - MURB_ECOLI -
32 HHSearch 63.0833% -77 - C1 -2GQT - MURB_THET8 -
4 PsiBlast_PDB 61.6132% -76 - C1 -2GQT 14.0 MURB_THET8
5 PsiBlast_PDB 61.5532% -76 - C1 -2GQU - MURB_THET8 -
50 Fugue 52.5697% -73 - C1 -1HSK 3.3 MURB_STAAU
49 Fugue 51.8222% -86 - C1 -1UXY Error ?
33 HHSearch 48.9021%-105 * C1 *3PM9 - ? -