@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0992: (2016-03-21 )
MAIVKVTDADFDSKVESGVQLVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL

Atome Classification :

(43 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MPD_B_5(2EIQ)
THIO_ECOLI
[Raw transfer]




PX5_A_5(3O6T)
THIO_MYCTU
[Raw transfer]




MPD_B_6(2TRX)
THIO_ECOLI
[Raw transfer]




PX5_C_7(3O6T)
THIO_MYCTU
[Raw transfer]




EDO_A_3(4POB)
?
[Raw transfer]




GSH_A_3(3F3R)
TRX1_YEAST
[Raw transfer]




MPD_A_3(2H72)
THIO_ECOLI
[Raw transfer]




BME_A_2(2I4A)
?
[Raw transfer]




BME_A_2(2I4A)
?
[Raw transfer]




GSH_B_5(3F3R)
TRX1_YEAST
[Raw transfer]




MPD_A_3(2H76)
THIO_ECOLI
[Raw transfer]




MPD_A_11(2TRX)
THIO_ECOLI
[Raw transfer]




MPD_D_13(2FCH)
THIO_ECOLI
[Raw transfer]




MPD_A_14(2FCH)
THIO_ECOLI
[Raw transfer]




MPD_B_5(2H6Z)
THIO_ECOLI
[Raw transfer]




MPD_B_5(2H72)
THIO_ECOLI
[Raw transfer]




MPD_B_5(2H70)
THIO_ECOLI
[Raw transfer]




MPD_G_11(2FCH)
THIO_ECOLI
[Raw transfer]




MPD_B_4(2H75)
THIO_ECOLI
[Raw transfer]




MPD_B_8(2TRX)
THIO_ECOLI
[Raw transfer]




MPD_A_3(2H70)
THIO_ECOLI
[Raw transfer]




MPD_A_3(2H6X)
THIO_ECOLI
[Raw transfer]




MPD_A_3(2H6Z)
THIO_ECOLI
[Raw transfer]




MPD_E_9(2FCH)
THIO_ECOLI
[Raw transfer]




MPD_A_3(2H6Y)
THIO_ECOLI
[Raw transfer]




MPD_A_3(2H71)
THIO_ECOLI
[Raw transfer]




MPD_A_3(2H73)
THIO_ECOLI
[Raw transfer]




MPD_A_3(2H74)
THIO_ECOLI
[Raw transfer]




MPD_A_9(2TRX)
THIO_ECOLI
[Raw transfer]




4 PsiBlast_PDB 93.8399%-146 - C1 -2O87 - THIO_STAAU -
1 PsiBlast_PDB 92.50100%-144 - C1 -2O7K - THIO_STAAU -
2 PsiBlast_PDB 92.2599%-145 - C1 -2O85 - THIO_STAAU -
5 PsiBlast_PDB 91.6898%-138 - C1 -2O89 - THIO_STAAU -
7 PsiBlast_PDB 81.8662%-121 - C1 -2GZZ - THIO_BACSU -
14 PsiBlast_PDB 80.8860%-131 - C1 -2VOC - THIO_BACSU -
66 PsiBlast_CBE 80.6950%-146 - C1 -2H6Z 2.7 THIO_ECOLI
6 PsiBlast_PDB 80.1662%-122 - C1 -2GZY - THIO_BACSU -
9 PsiBlast_PDB 79.5461%-133 - C1 -2IPA - THIO_BACSU -
119 HHSearch 79.5261%-136 - C1 -2YJ7 - ? -
22 PsiBlast_CBE 78.6856%-136 - C1 -4BA7 - ? -
3 PsiBlast_PDB 78.6799%-143 - C1 -3DIE - THIO_STAAU -
15 PsiBlast_PDB 78.4752%-140 - C1 -3ZIV - ? -
62 PsiBlast_CBE 78.4550%-146 - C1 -2H72 3.1 THIO_ECOLI
21 PsiBlast_CBE 78.1899%-143 - C1 -3DIE - THIO_STAAU -
126 HHSearch 77.9663%-118 - C1 -2VOC - THIO_BACSU -
12 PsiBlast_PDB 77.8058%-133 - C1 -2YJ7 - ? -
23 PsiBlast_CBE 77.7855%-134 - C1 -2YNX - ? -
44 PsiBlast_CBE 77.6251%-135 - C1 -2FCH 2.6 THIO_ECOLI
69 PsiBlast_CBE 77.5350%-144 - C1 -2H75 2.7 THIO_ECOLI
45 PsiBlast_CBE 77.0551%-136 - C1 -2FCH 2.9 THIO_ECOLI
56 PsiBlast_CBE 76.7050%-136 - C1 -2TRX 4.2 THIO_ECOLI
48 PsiBlast_CBE 76.6651%-134 - C1 -2FCH 2.7 THIO_ECOLI
57 PsiBlast_CBE 76.1750%-142 - C1 -2TRX 2.9 THIO_ECOLI
71 PsiBlast_CBE 76.0350%-148 - C1 -2H70 2.6 THIO_ECOLI
49 PsiBlast_CBE 75.6351%-137 - C1 -2H73 2.6 THIO_ECOLI
55 PsiBlast_CBE 75.5750%-132 - C1 -2H74 2.3 THIO_ECOLI
67 PsiBlast_CBE 75.2550%-127 - C1 -2H6Z 2.8 THIO_ECOLI
50 PsiBlast_CBE 74.6650%-131 - C1 -2H76 3.9 THIO_ECOLI
43 PsiBlast_CBE 74.5451%-137 - C1 -2FCH 2.8 THIO_ECOLI
72 PsiBlast_CBE 74.2450%-130 - C1 -2H70 2.5 THIO_ECOLI
41 PsiBlast_CBE 73.7951%-126 - C1 -2H6Y 2.5 THIO_ECOLI
58 PsiBlast_CBE 73.2650%-130 - C1 -2H6X 3.6 THIO_ECOLI
51 PsiBlast_CBE 73.1050%-132 - C1 -2H71 2.8 THIO_ECOLI
65 PsiBlast_CBE 73.0050%-117 - C1 -2EIQ Error THIO_ECOLI
117 HHSearch 71.8146%-122 - C1 -2I4A 2.8 ?
36 PsiBlast_CBE 70.1757%-130 - C1 -3O6T 4.6 THIO_MYCTU
34 PsiBlast_CBE 70.1057%-126 - C1 -3O6T 4.5 THIO_MYCTU
139 Fugue 69.8851%-135 - C1 -2TRX 3.4 THIO_ECOLI
73 PsiBlast_CBE 68.5153%-111 - C1 -4POB 2.8 ?
84 PsiBlast_CBE 67.9550%-127 - C1 -2I4A 2.8 ?
93 PsiBlast_CBE 62.6350%-125 - C1 -3F3R 2.1 TRX1_YEAST
94 PsiBlast_CBE 61.0050%-120 - C1 -3F3R 3.4 TRX1_YEAST