@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1054: (2016-03-21 )
MKKILLAVTGGIAAYKAIDLTSKLTQSGYEVRVMLTNHAQKFVTPLAFQAISRNAVYTDTFIEENPSEIQHIALGDWADAIIVAPATANTIAKLSVGIADDLVTSTLLATETPKFIAPAMNVHMYENKRTQQNINILKEDGYHFIEPGSGFLACGYVAKGRMEEPLQIVSVIDAHFQNSNRLANSSFQDKRALVTAGPTIEVIDPVRFVSNRSSGKMGYAIAEALRNRGAIVTLVAGPTTLEDPKDIEVIHVQSAEEMFEQVTSRFDEQDIVVKAAAVSDYTPVDVLEHKMKKQDGDLSVSFKRTKDILKYLGEHKTSQYLIGFAAETEDIENYAQQKLRKKNADVIISNNVGDMSIGFSSDDNELTMHFKNNEKVNIKKGKKVVLAAQILDELETRWQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PMT_E_5(1U7Z)
COABC_ECOLI
[Raw transfer]



PMT_E_5(1U7Z)
COABC_ECOLI
[Raw transfer]



PMT_E_5(1U7Z)
COABC_ECOLI
[Raw transfer]



CTP_A_7(1U7W)
COABC_ECOLI
[Raw transfer]



PMT_G_7(1U7Z)
COABC_ECOLI
[Raw transfer]



PMT_F_6(1U7Z)
COABC_ECOLI
[Raw transfer]



CTP_B_8(1U7W)
COABC_ECOLI
[Raw transfer]



CTP_A_3(4QJI)
?
[Raw transfer]



C5P_K_11(1U80)
COABC_ECOLI
[Raw transfer]



C5P_I_9(1U80)
COABC_ECOLI
[Raw transfer]



CTP_B_5(4QJI)
?
[Raw transfer]



C5P_J_10(1U80)
COABC_ECOLI
[Raw transfer]
52 HHSearch 93.5640% -68 * C3 *1U7Z 10.1 COABC_ECOLI
4 PsiBlast_PDB 93.3941% -73 - C3 -1U80 4.0 COABC_ECOLI
23 PsiBlast_CBE 91.8541% -71 - C3 -1U7Z 10.2 COABC_ECOLI
3 PsiBlast_PDB 91.6141% -70 - C3 -1U7Z 10.5 COABC_ECOLI
25 PsiBlast_CBE 91.1541% -84 - C3 -1U7W 4.2 COABC_ECOLI
21 PsiBlast_CBE 90.5641% -75 - C3 -1U80 4.2 COABC_ECOLI
2 PsiBlast_PDB 87.8641% -85 - C3 -1U7W 4.0 COABC_ECOLI
26 PsiBlast_CBE 87.5737% -72 - C3 -4QJI 5.3 ?
66 Fugue 86.6838% -68 - C3 -1U7Z 10.1 COABC_ECOLI
24 PsiBlast_CBE 84.8441% -70 - C3 -1U7Z 9.3 COABC_ECOLI
22 PsiBlast_CBE 84.7541% -73 - C3 -1U80 3.3 COABC_ECOLI
5 PsiBlast_PDB 84.6937% -78 - C3 -4QJI 5.2 ?
7 PsiBlast_PDB 83.9532%-103 - C3 -1MVL - HAL3A_ARATH -
6 PsiBlast_PDB 83.9333%-101 - C3 -1E20 - HAL3A_ARATH -
8 PsiBlast_PDB 83.2232%-102 - C3 -1MVN - HAL3A_ARATH -
1 PsiBlast_PDB 82.7741% -81 - C3 -1U7U - COABC_ECOLI -
44 HHSearch 82.6834% -87 - C3 -1MVL - HAL3A_ARATH -
68 Fugue 82.4231% -81 - C3 -1E20 - HAL3A_ARATH -
67 Fugue 82.1432% -77 - C3 -1E20 - HAL3A_ARATH -
42 HHSearch 79.8427% -52 - C3 -2GK4 - ? -