@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA2149: (2016-04-01 )
MALVVKDIVKNFGEGLSETKVLKGINFEVEQGEFVILNGASGSGKTTLLTILGGLLSQTSGTVLYNDAPLFDKQHRPSDLRLEDIGFIFQSSHLVPYLKVIEQLTLVGQEAGMTKQQSSTRAIQLLKNIGLEDRLNVYPHQLSGGEKQRVAIMRAFMNNPKIILADEPTASLDADRATKVVEMIRQQIKEQQMIGIMITHDRRLFEYADRVIELEDGKITD

Atome Classification :

(40 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_C_11(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_H_8(2FGK)

[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_G_7(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_H_8(2FGJ)

[Raw transfer]




ATP_B_10(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_D_12(1XEF)

[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ADP_B_2(2FFA)

[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




ATP_F_6(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




ADP_B_2(2FFB)

[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




115 HHSearch 85.7136%-102 - C1 -3TIF - Y796_METJA -
24 PsiBlast_CBE 85.5436%-112 - C1 -4YMV - ? -
112 HHSearch 84.4939%-104 - C1 -2PCJ - LOLD_AQUAE -
9 PsiBlast_PDB 84.0836%-112 - C1 -4YMV - ? -
22 PsiBlast_CBE 84.0537%-103 - C1 -1L2T - Y796_METJA -
113 HHSearch 83.9736%-107 * C1 *2OLJ 5.9 ?
8 PsiBlast_PDB 83.8036%-112 - C1 -4YMU - ? -
6 PsiBlast_PDB 82.8536%-115 - C1 -4YMS - ? -
10 PsiBlast_PDB 82.6936%-116 - C1 -4YMW - ? -
23 PsiBlast_CBE 82.6337%-105 - C1 -3TIF - Y796_METJA -
17 PsiBlast_PDB 82.1934%-103 - C1 -4U00 - ? -
4 PsiBlast_PDB 81.8437%-100 - C1 -3TIF - Y796_METJA -
25 PsiBlast_CBE 81.8236%-111 - C1 -4YMU - ? -
7 PsiBlast_PDB 81.7336%-111 - C1 -4YMT - ? -
3 PsiBlast_PDB 80.9337%-102 - C1 -1L2T - Y796_METJA -
26 PsiBlast_CBE 80.5334%-109 - C1 -3C4J - ? -
37 PsiBlast_CBE 79.7134%-101 - C1 -4U02 - ? -
117 Fugue 79.5529% -98 - C1 -1OXS - ? -
15 PsiBlast_PDB 79.4234%-107 - C1 -3C4J - ? -
2 PsiBlast_PDB 78.3641%-102 - C1 -2PCL - LOLD_AQUAE -
101 HHSearch 73.4131%-102 - C1 -3FVQ 7.0 FBPC_NEIG1
76 PsiBlast_CBE 69.6932% -94 - C1 -3FVQ 7.0 FBPC_NEIG1
75 PsiBlast_CBE 69.0532% -99 - C1 -3FVQ 7.5 FBPC_NEIG1
90 PsiBlast_CBE 60.1031%-113 - C1 -2FGJ 5.5 HLYBP_ECOLX
82 PsiBlast_CBE 59.3231%-108 - C1 -2FGK 5.6
93 PsiBlast_CBE 58.7531%-118 - C1 -1XEF 5.2 HLYBP_ECOLX
95 PsiBlast_CBE 58.3831%-114 - C1 -1XEF 4.9 HLYBP_ECOLX
84 PsiBlast_CBE 58.2831%-107 - C1 -2FGK 5.3 HLYBP_ECOLX
87 PsiBlast_CBE 58.0231%-111 - C1 -2FGJ 5.0
92 PsiBlast_CBE 57.5931%-113 - C1 -1XEF 5.2
83 PsiBlast_CBE 56.7131%-107 - C1 -2FGK 4.9 HLYBP_ECOLX
88 PsiBlast_CBE 56.3231%-107 - C1 -2FGJ 5.4 HLYBP_ECOLX
89 PsiBlast_CBE 56.1831%-105 - C1 -2FGJ 5.4 HLYBP_ECOLX
85 PsiBlast_CBE 55.8731%-111 - C1 -2FGK 5.6 HLYBP_ECOLX
81 PsiBlast_CBE 54.0831%-109 - C1 -3B5J 5.2
94 PsiBlast_CBE 53.8231%-111 - C1 -1XEF 5.4 HLYBP_ECOLX
78 PsiBlast_CBE 53.6531%-111 - C1 -2PMK 4.8
86 PsiBlast_CBE 52.8331%-107 - C1 -2FFB 5.0
79 PsiBlast_CBE 52.5231%-111 - C1 -2FF7 5.0
91 PsiBlast_CBE 52.4931%-107 - C1 -2FFA 4.9